Fungal Genomics

at Utrecht University

General Properties

Protein ID	Ani_SJS72_1\|g706.t1
Gene name
Location	scaffold_003:416041..417455
Strand	+
Gene length (bp)	1414
Transcript length (bp)	516
Coding sequence length (bp)	516
Protein length (aa)	172

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF04193	PQ-loop	PQ loop repeat	1.6E-15	19	60

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 55	0.5

Transmembrane Domains

Domain #	Start	End	Length
1	17	39	22
2	68	90	22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Ani_SJS72_1\|g706.t1 MAPITARSDSDDGNITVASYVLGTIGTVLWCIQLIPQIWYNWRQKKTDGFPPLMMLLWASSAQGSFDILGGIMYI LVVVLEAGIYASHIIWRIRYRAVRKEARASGKSIDEVLEEQNRVQTNQETKKDGIISHHRGNSSHVQQQQQQQQQ QQQQSGPKVTQTISEANAAGA*
Coding	>Ani_SJS72_1\|g706.t1 ATGGCTCCTATTACTGCTAGGAGCGACAGTGATGACGGCAATATCACAGTCGCCTCCTATGTCCTCGGCACGATT GGCACCGTCCTCTGGTGCATCCAGCTAATACCCCAGATCTGGTATAATTGGCGACAGAAAAAAACCGATGGGTTT CCGCCTTTGATGATGCTTCTGTGGGCTTCTTCTGCCCAGGGATCATTCGATATACTTGGAGGCATCATGTACATA CTCGTGGTCGTCCTCGAGGCAGGAATCTATGCAAGCCATATCATCTGGCGGATTCGGTACCGCGCAGTCCGCAAG GAAGCCAGGGCATCTGGCAAAAGTATCGATGAAGTGCTGGAGGAGCAAAATAGGGTCCAAACGAACCAGGAAACC AAGAAGGATGGGATCATTTCTCATCACCGTGGGAACAGCAGCCATGTGCAGCAGCAGCAACAGCAGCAACAGCAA CAGCAACAGCAATCGGGGCCGAAAGTAACGCAAACCATTTCGGAGGCAAATGCTGCCGGTGCCTGA
Transcript	>Ani_SJS72_1\|g706.t1 ATGGCTCCTATTACTGCTAGGAGCGACAGTGATGACGGCAATATCACAGTCGCCTCCTATGTCCTCGGCACGATT GGCACCGTCCTCTGGTGCATCCAGCTAATACCCCAGATCTGGTATAATTGGCGACAGAAAAAAACCGATGGGTTT CCGCCTTTGATGATGCTTCTGTGGGCTTCTTCTGCCCAGGGATCATTCGATATACTTGGAGGCATCATGTACATA CTCGTGGTCGTCCTCGAGGCAGGAATCTATGCAAGCCATATCATCTGGCGGATTCGGTACCGCGCAGTCCGCAAG GAAGCCAGGGCATCTGGCAAAAGTATCGATGAAGTGCTGGAGGAGCAAAATAGGGTCCAAACGAACCAGGAAACC AAGAAGGATGGGATCATTTCTCATCACCGTGGGAACAGCAGCCATGTGCAGCAGCAGCAACAGCAGCAACAGCAA CAGCAACAGCAATCGGGGCCGAAAGTAACGCAAACCATTTCGGAGGCAAATGCTGCCGGTGCCTGA
Gene	>Ani_SJS72_1\|g706.t1 ATGGCTCCTATTACTGCTAGGAGCGACAGTGATGACGGCAATATCACAGTCGCCTCCTATGTCCTCGGCACGATT GGCACCGTCCTCTGGTGCATCCAGCTAATACCCCAGATCTGGTATAATTGGCGACAGAAAAAAACCGATGGGTTT CCGCCTTTGATGATGCTTCTGTGGGCTTCTTGTGCGTTTTCGGAGACCTGCTTGTTCTTTCTTGTACTTTCGTGA TTGCAATAGCATGCATGGTATGGAAGGTTGACGCAATGAGTTGTTGCTTTATCGAACAGGTGCCGTACCAATGGG CGCTTATATGATCTTGCAAGTGAGTAGCACGTTTCTTGGTGATCCCACTGAATTGATTTGAGGGATCTGATAAGG GTGCTCGCAGGAAGTCAATTTACCGCTTCAGATTCAGCCGCAGATTTTTGGCTTCTTTTCGCTGGTGAGCTGGGG GCAGATATTATACTATAATCAGTATGTATTTCTAGTTGTTGCTATTGTCGAGAGGAGGGGGTTTGAATGGGGGGA AGTTAATGTCTCTTGTGCGTGATGATAGTAATTATACATGTCTCAAGACAACGTCATTAGTTGTGGCTACGGCGG TGTTGTTCGGTGGGATTGAGACGTTGTTGGTTCTTACTTTGAGGGTTTGTTCCTTTACTTCCTGTGGTTCGAATT GTGGGCTAATTTTCTCGGTGTTCAGATACCATATAATAAGGGTGTGACCTGGCCGGACCTGGTGGTTGGTGTTGT TGCGGCAATTTTACTAGCATCTGGGCTTTTGCCGCCGTATTATGAGTTGTGGAAGAGAGATGGCCGTGTAATTGG GTTCAGTGAGTTTTCAGTTGTGTGTTATCGGGATTGATGCATTGCTGATGGTCCGTAGATTGGGTGTTCTTGTCC ATTGATACCCTGGGAGGACTTTTCTCGCTATTCGCTCTAGGTTCGCTTGCACGGGCATGGGATCTTCTTATTATC ATGTGAGGTCTGACGATAATTTGTAGCTGCCCAGGGATCATTCGATATACTTGGAGGCATCATGTACATACTCGT GTAAGTGGGACGCATTGACGAGCTTTCAGCGACGTTCAAAGTTGTGGACTGGCTGACCCGGGTGAGTGGCATCAA TAGGGTCGTCCTCGAGGCAGGAATCTATGCAAGCCATATCATCTGGCGGATTCGGTACCGCGCAGTCCGCAAGGA AGCCAGGGCATCTGGCAAAAGTATCGATGAAGTGCTGGAGGAGCAAAATAGGGTCCAAACGAACCAGGAAACCAA GAAGGATGGGATCATTTCTCATCACCGTGGGAACAGCAGCCATGTGCAGCAGCAGCAACAGCAGCAACAGCAACA GCAACAGCAATCGGGGCCGAAAGTAACGCAAACCATTTCGGAGGCAAATGCTGCCGGTGCCTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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