© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS72_1|g705.t1 |
| Gene name | |
| Location | scaffold_003:413819..414876 |
| Strand | + |
| Gene length (bp) | 1057 |
| Transcript length (bp) | 867 |
| Coding sequence length (bp) | 867 |
| Protein length (aa) | 289 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00018 | SH3_1 | SH3 domain | 4.4E-09 | 235 | 282 |
| PF07653 | SH3_2 | Variant SH3 domain | 1.1E-05 | 234 | 285 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0005515 | protein binding | Yes |
| GO:0003674 | molecular_function | No |
| GO:0005488 | binding | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 41 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 13 | 35 | 22 |
| 2 | 45 | 64 | 19 |
| 3 | 69 | 91 | 22 |
| 4 | 101 | 123 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS72_1|g705.t1 MARFRASNILGDPFALATTSISILAWLIAFISSIVTGVHGGYPTYSWWAVAYSFCCIVGMALVFGTDTGAVYNIA IVGYLSAGLVITTISINTLVYANSAASQAAGAGFILLAMVIIIWIFYFGSSPQASHRGFIDSFALQKEGAGSYGN GRPMSTAFGNRPETTSSQPPQMYTSAQLNGFETSSPVSGYPGGAPGSEHRSSSQPRFGNPSATNLPNNGAPDEVP QPTEYPYRAKAIYSYEANPEDANEISFTKHEILEVSDVSGRWWQARKATGETGIAPSNYLILL* |
| Coding | >Ani_SJS72_1|g705.t1 ATGGCGCGCTTCAGAGCCAGCAATATTCTGGGCGACCCCTTTGCGCTCGCAACCACGTCCATCTCCATTTTGGCT TGGTTGATCGCATTTATCTCCTCCATTGTCACTGGCGTACATGGCGGATATCCCACCTATTCATGGTGGGCTGTT GCTTACTCATTTTGCTGCATTGTCGGCATGGCGCTTGTCTTCGGCACCGATACTGGTGCCGTCTATAACATAGCG ATCGTGGGGTATCTTTCCGCTGGTCTTGTTATCACAACAATCTCCATCAACACGTTAGTCTATGCAAACAGCGCC GCATCGCAGGCTGCCGGTGCTGGGTTCATTCTTTTGGCTATGGTTATTATCATTTGGATTTTCTACTTCGGATCT AGCCCTCAGGCTTCGCATCGCGGCTTCATCGATTCATTTGCCCTCCAGAAGGAAGGTGCTGGCTCGTACGGAAAT GGCAGACCTATGTCAACTGCATTCGGCAATCGACCCGAGACGACATCCAGCCAGCCCCCGCAGATGTACACGTCC GCTCAACTCAACGGCTTCGAGACCTCTTCGCCCGTGTCGGGTTATCCCGGAGGAGCCCCCGGCTCCGAACACCGC AGCTCCTCGCAGCCCCGCTTCGGCAACCCGTCCGCTACGAATCTGCCCAACAATGGCGCACCAGATGAAGTCCCC CAGCCCACGGAATATCCGTACCGTGCGAAGGCGATCTATTCGTATGAGGCCAACCCTGAAGATGCCAATGAGATC AGTTTCACCAAGCATGAGATCTTGGAGGTGTCCGATGTGAGCGGTAGATGGTGGCAGGCCAGGAAGGCCACCGGA GAGACCGGTATTGCTCCATCCAACTACCTGATCTTGCTGTGA |
| Transcript | >Ani_SJS72_1|g705.t1 ATGGCGCGCTTCAGAGCCAGCAATATTCTGGGCGACCCCTTTGCGCTCGCAACCACGTCCATCTCCATTTTGGCT TGGTTGATCGCATTTATCTCCTCCATTGTCACTGGCGTACATGGCGGATATCCCACCTATTCATGGTGGGCTGTT GCTTACTCATTTTGCTGCATTGTCGGCATGGCGCTTGTCTTCGGCACCGATACTGGTGCCGTCTATAACATAGCG ATCGTGGGGTATCTTTCCGCTGGTCTTGTTATCACAACAATCTCCATCAACACGTTAGTCTATGCAAACAGCGCC GCATCGCAGGCTGCCGGTGCTGGGTTCATTCTTTTGGCTATGGTTATTATCATTTGGATTTTCTACTTCGGATCT AGCCCTCAGGCTTCGCATCGCGGCTTCATCGATTCATTTGCCCTCCAGAAGGAAGGTGCTGGCTCGTACGGAAAT GGCAGACCTATGTCAACTGCATTCGGCAATCGACCCGAGACGACATCCAGCCAGCCCCCGCAGATGTACACGTCC GCTCAACTCAACGGCTTCGAGACCTCTTCGCCCGTGTCGGGTTATCCCGGAGGAGCCCCCGGCTCCGAACACCGC AGCTCCTCGCAGCCCCGCTTCGGCAACCCGTCCGCTACGAATCTGCCCAACAATGGCGCACCAGATGAAGTCCCC CAGCCCACGGAATATCCGTACCGTGCGAAGGCGATCTATTCGTATGAGGCCAACCCTGAAGATGCCAATGAGATC AGTTTCACCAAGCATGAGATCTTGGAGGTGTCCGATGTGAGCGGTAGATGGTGGCAGGCCAGGAAGGCCACCGGA GAGACCGGTATTGCTCCATCCAACTACCTGATCTTGCTGTGA |
| Gene | >Ani_SJS72_1|g705.t1 ATGGCGCGCTTCAGAGCCAGCAATATTCTGGGCGACCCCTTTGCGCTCGCAACCACGTCCATCTCCATTGTATGT CTTCAATTCGTCCTCGTGCGGTGGTTAGGATCCGCTGCTAATCACCTTTTCTTCGTTTAGTTGGCTTGGTTGATC GCATTTATCTCCTCCATTGTCACTGGCGTACATGGCGGATATCCCACCTATTCATGGTGGGCTGTTGCTTACTCA TTTTGCTGCATTGTCGGCATGGCGCTTGTCTTCGGCACCGATACTGGTGCCGTCTATAACATAGCGGTATGTTAC CATCCCTCCTGAATCAATCTTTTGACAACCCTTCGTACTGATTTATGGCAGATCGTGGGGTATCTTTCCGCTGGT CTTGTTATCACAACAATCTCCATCAACACGTTAGTCTATGCAAACAGCGCCGCATCGCAGGCTGCCGGTGCTGGG TTCATTCTTTTGGCTATGGTTATTGTAAGTGATAACCAGCTCCGACACACATACCCACTAGGCAGTACGTGACTT ACCATTAATGCAGATCATTTGGATTTTCTACTTCGGATCTAGCCCTCAGGCTTCGCATCGCGGCTTCATCGATTC ATTTGCCCTCCAGAAGGAAGGTGCTGGCTCGTACGGAAATGGCAGACCTATGTCAACTGCATTCGGCAATCGACC CGAGACGACATCCAGCCAGCCCCCGCAGATGTACACGTCCGCTCAACTCAACGGCTTCGAGACCTCTTCGCCCGT GTCGGGTTATCCCGGAGGAGCCCCCGGCTCCGAACACCGCAGCTCCTCGCAGCCCCGCTTCGGCAACCCGTCCGC TACGAATCTGCCCAACAATGGCGCACCAGATGAAGTCCCCCAGCCCACGGAATATCCGTACCGTGCGAAGGCGAT CTATTCGTATGAGGCCAACCCTGAAGATGCCAATGAGATCAGTTTCACCAAGCATGAGATCTTGGAGGTGTCCGA TGTGAGCGGTAGATGGTGGCAGGCCAGGAAGGCCACCGGAGAGACCGGTATTGCTCCATCCAACTACCTGATCTT GCTGTGA |