Protein ID | Ani_SJS72_1|g6998.t1 |
Gene name | |
Location | scaffold_054:226551..228165 |
Strand | + |
Gene length (bp) | 1614 |
Transcript length (bp) | 1215 |
Coding sequence length (bp) | 1215 |
Protein length (aa) | 405 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 27 | 49 | 22 |
2 | 62 | 84 | 22 |
3 | 99 | 121 | 22 |
4 | 142 | 164 | 22 |
5 | 195 | 217 | 22 |
6 | 224 | 246 | 22 |
7 | 266 | 288 | 22 |
Orthofinder run ID | 3 |
Orthogroup | 9897 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS72_1|g6998.t1 MNLSEIPMSQPPPGQVTNFVDPVSISWAGRLSIWLTLPIMAVAFVLRIYVRLKSRQMGIDDYFLVVGAVGAASFC GTLIPIFLKDVWGRHAWDIPVSSIVPWFFKFSVTAGCLYNISAMFTKVSILAFYLRIFSPARSARALIWCGIIFI VLGYMTLTIAMLAWMVPHRGDGGWGSTANTERMNVASRQLDFTQGIFSVVSDFYVITIPTGIIYRLNMKTQKKIG VACIFLFGFVSLGCSIAGTVLRYHAMVFTVVDNRWLSVKFEALCVVELNIGVLCACVPVFFVVLRTWKQRTETGF AYLKQRLLTSPGSKETVVLGERQQKPGVSLDIPTGTLSGLKTFFHKLKPDQETVKSGIRVSHYFELQSVDIDYHA HIRGDAASGRNPSLAGSKGVSRGASRGGV* |
Coding | >Ani_SJS72_1|g6998.t1 ATGAATCTTTCAGAAATTCCCATGTCACAACCCCCTCCGGGGCAAGTGACCAATTTCGTGGACCCGGTGTCCATC TCTTGGGCGGGGCGGTTGTCCATTTGGTTGACCTTACCTATCATGGCAGTAGCCTTTGTCTTGCGGATTTATGTC CGTCTGAAATCACGGCAAATGGGAATAGATGACTATTTTCTGGTCGTCGGAGCCGTCGGCGCTGCTTCATTTTGT GGGACACTTATTCCCATTTTCCTCAAAGATGTCTGGGGACGTCATGCGTGGGACATCCCCGTCTCCTCAATCGTT CCGTGGTTTTTCAAGTTCTCTGTGACGGCAGGGTGTCTGTACAACATCAGCGCCATGTTCACAAAAGTTTCGATT CTTGCATTCTATCTCCGCATTTTCTCCCCCGCGCGCAGCGCCCGAGCTCTTATCTGGTGTGGAATTATATTCATT GTTCTGGGATACATGACTCTTACCATCGCCATGCTGGCCTGGATGGTCCCCCATCGGGGGGACGGGGGGTGGGGG TCGACGGCCAATACAGAACGGATGAACGTCGCATCCAGACAACTCGACTTTACACAAGGCATATTCAGTGTTGTC TCCGACTTCTATGTCATCACCATCCCCACTGGCATTATCTATCGCCTGAATATGAAAACCCAGAAGAAGATTGGT GTTGCGTGTATCTTTCTCTTCGGTTTCGTGTCGCTTGGTTGCTCTATAGCCGGCACAGTTCTTCGTTATCACGCC ATGGTTTTCACTGTAGTTGACAACCGGTGGCTCTCCGTCAAATTTGAAGCACTATGCGTGGTCGAGCTTAATATC GGAGTCCTCTGCGCTTGCGTTCCCGTTTTCTTTGTCGTGTTGCGCACCTGGAAGCAAAGAACTGAAACTGGGTTC GCTTACCTCAAACAACGGCTGTTGACATCTCCAGGAAGTAAAGAGACGGTGGTCCTGGGCGAGCGGCAGCAGAAA CCTGGAGTCTCCCTTGATATTCCGACCGGCACCTTGTCGGGACTGAAGACTTTCTTCCACAAACTGAAGCCGGAT CAGGAAACAGTCAAGTCTGGTATTCGTGTGTCGCATTATTTTGAGCTACAGTCTGTCGACATTGATTATCATGCT CACATCAGGGGCGATGCGGCCAGTGGAAGGAACCCGTCGTTGGCTGGCAGCAAAGGGGTCTCTCGAGGGGCCTCT CGAGGGGGTGTTTAG |
Transcript | >Ani_SJS72_1|g6998.t1 ATGAATCTTTCAGAAATTCCCATGTCACAACCCCCTCCGGGGCAAGTGACCAATTTCGTGGACCCGGTGTCCATC TCTTGGGCGGGGCGGTTGTCCATTTGGTTGACCTTACCTATCATGGCAGTAGCCTTTGTCTTGCGGATTTATGTC CGTCTGAAATCACGGCAAATGGGAATAGATGACTATTTTCTGGTCGTCGGAGCCGTCGGCGCTGCTTCATTTTGT GGGACACTTATTCCCATTTTCCTCAAAGATGTCTGGGGACGTCATGCGTGGGACATCCCCGTCTCCTCAATCGTT CCGTGGTTTTTCAAGTTCTCTGTGACGGCAGGGTGTCTGTACAACATCAGCGCCATGTTCACAAAAGTTTCGATT CTTGCATTCTATCTCCGCATTTTCTCCCCCGCGCGCAGCGCCCGAGCTCTTATCTGGTGTGGAATTATATTCATT GTTCTGGGATACATGACTCTTACCATCGCCATGCTGGCCTGGATGGTCCCCCATCGGGGGGACGGGGGGTGGGGG TCGACGGCCAATACAGAACGGATGAACGTCGCATCCAGACAACTCGACTTTACACAAGGCATATTCAGTGTTGTC TCCGACTTCTATGTCATCACCATCCCCACTGGCATTATCTATCGCCTGAATATGAAAACCCAGAAGAAGATTGGT GTTGCGTGTATCTTTCTCTTCGGTTTCGTGTCGCTTGGTTGCTCTATAGCCGGCACAGTTCTTCGTTATCACGCC ATGGTTTTCACTGTAGTTGACAACCGGTGGCTCTCCGTCAAATTTGAAGCACTATGCGTGGTCGAGCTTAATATC GGAGTCCTCTGCGCTTGCGTTCCCGTTTTCTTTGTCGTGTTGCGCACCTGGAAGCAAAGAACTGAAACTGGGTTC GCTTACCTCAAACAACGGCTGTTGACATCTCCAGGAAGTAAAGAGACGGTGGTCCTGGGCGAGCGGCAGCAGAAA CCTGGAGTCTCCCTTGATATTCCGACCGGCACCTTGTCGGGACTGAAGACTTTCTTCCACAAACTGAAGCCGGAT CAGGAAACAGTCAAGTCTGGTATTCGTGTGTCGCATTATTTTGAGCTACAGTCTGTCGACATTGATTATCATGCT CACATCAGGGGCGATGCGGCCAGTGGAAGGAACCCGTCGTTGGCTGGCAGCAAAGGGGTCTCTCGAGGGGCCTCT CGAGGGGGTGTTTAG |
Gene | >Ani_SJS72_1|g6998.t1 ATGAATCTTTCAGAAATTCCCATGTCACAACCCCCTCCGGGGCAAGTGACCAATTTCGTGGACCCGGTGTCCATC TCTTGGGCGGGGCGGTTGTCCATTTGGTTGACCTTACCTATCATGGCAGTAGCCTTTGTCTTGCGGATTTATGTC CGTCTGAAATCACGGCAAATGGGAATAGATGACTGTAGGTACCCATCAAGATTCCGACTCATCGCAATCAATGCC TGATACTGACTGCGACTTCAGATTTTCTGGTCGTCGGAGCCGTGAGTATTCACTCAGTATTATATATCCAATAAA ACCCCTCTGTTCCTCACAACCAGCTCTTTTATCTACTAGGTCGGCGCTGCTTCATTTTGTGGGACACTTATTCCC ATTTGTACGTCGCCCTCTAGCCTCTTTTTTGCACTCGCGGGTTTAGTTGGCTTATTTTTGAACCAGTCCTCAAAG ATGTCTGGGGACGTCATGCGTGGGACATCCCCGTCTCCTCAATCGTTCCGTGGTTTTTCAAGGTATGGTGCTCGT CCAGGTTATTCCAATCATTGCGCAACCTTCCAACTTTTACATCAATAGTTCTCTGTGACGGCAGGGTGTCTGTAC AACATCAGCGCCATGTTCACAAAAGTTTCGATTCTTGCATTCTATCTCCGCATTTTCTCCCCCGCGCGCAGCGCC CGAGCTCTTATCTGGTGTGGAATTATATTCATTGTTCTGGGATACATGACTCTTACCATCGCCATGCTGGCCTGG ATGGTCCCCCATCGGGGGGACGGGGGGTGGGGGTCGACGGCCAATACAGAACGGATGAACGTCGCATCCAGACAA CTCGACTTTACACAAGGCATATTCAGTGTTGTCTCCGACTTCTATGTCATCACCATCCCCACTGGCATTATCTAT CGCCTGAATATGAAAACCCAGAAGAAGATTGGTGTTGCGTGTATCTTTCTCTTCGGTTTCGTGTAAGTGATCGGT TCCTGTCAAGGCATCAGCGCTTGTACCGAAGACTAACACCCTACCACCAGGTCGCTTGGTTGCTCTATAGCCGGC ACAGTTCTTCGTTATCACGCCATGGTTTTCACTGTAGTTGACAACCGGTGGCTCTCCGTCAAATTTGAAGCACTA TGGTAAGTAACATGGCTTTGATCGCCACTTAGCCCAGCCCCGGTCTTGGTGTATTCCAGTTCTGATAGGCTTTTC TCCAGCGTGGTCGAGCTTAATATCGGAGTCCTCTGCGCTTGCGTTCCCGTTTTCTTTGTCGTGTTGCGCACCTGG AAGCAAAGAACTGAAACTGGGTTCGCTTACCTCAAACAACGGCTGTTGACATCTCCAGGAAGTAAAGAGACGGTG GTCCTGGGCGAGCGGCAGCAGAAACCTGGAGTCTCCCTTGATATTCCGACCGGCACCTTGTCGGGACTGAAGACT TTCTTCCACAAACTGAAGCCGGATCAGGAAACAGTCAAGTCTGGTATTCGTGTGTCGCATTATTTTGAGCTACAG TCTGTCGACATTGATTATCATGCTCACATCAGGGGCGATGCGGCCAGTGGAAGGAACCCGTCGTTGGCTGGCAGC AAAGGGGTCTCTCGAGGGGCCTCTCGAGGGGGTGTTTAG |