© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS72_1|g6998.t1 |
| Gene name | |
| Location | scaffold_054:226551..228165 |
| Strand | + |
| Gene length (bp) | 1614 |
| Transcript length (bp) | 1215 |
| Coding sequence length (bp) | 1215 |
| Protein length (aa) | 405 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 27 | 49 | 22 |
| 2 | 62 | 84 | 22 |
| 3 | 99 | 121 | 22 |
| 4 | 142 | 164 | 22 |
| 5 | 195 | 217 | 22 |
| 6 | 224 | 246 | 22 |
| 7 | 266 | 288 | 22 |
| Orthofinder run ID | 3 |
| Orthogroup | 9897 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS72_1|g6998.t1 MNLSEIPMSQPPPGQVTNFVDPVSISWAGRLSIWLTLPIMAVAFVLRIYVRLKSRQMGIDDYFLVVGAVGAASFC GTLIPIFLKDVWGRHAWDIPVSSIVPWFFKFSVTAGCLYNISAMFTKVSILAFYLRIFSPARSARALIWCGIIFI VLGYMTLTIAMLAWMVPHRGDGGWGSTANTERMNVASRQLDFTQGIFSVVSDFYVITIPTGIIYRLNMKTQKKIG VACIFLFGFVSLGCSIAGTVLRYHAMVFTVVDNRWLSVKFEALCVVELNIGVLCACVPVFFVVLRTWKQRTETGF AYLKQRLLTSPGSKETVVLGERQQKPGVSLDIPTGTLSGLKTFFHKLKPDQETVKSGIRVSHYFELQSVDIDYHA HIRGDAASGRNPSLAGSKGVSRGASRGGV* |
| Coding | >Ani_SJS72_1|g6998.t1 ATGAATCTTTCAGAAATTCCCATGTCACAACCCCCTCCGGGGCAAGTGACCAATTTCGTGGACCCGGTGTCCATC TCTTGGGCGGGGCGGTTGTCCATTTGGTTGACCTTACCTATCATGGCAGTAGCCTTTGTCTTGCGGATTTATGTC CGTCTGAAATCACGGCAAATGGGAATAGATGACTATTTTCTGGTCGTCGGAGCCGTCGGCGCTGCTTCATTTTGT GGGACACTTATTCCCATTTTCCTCAAAGATGTCTGGGGACGTCATGCGTGGGACATCCCCGTCTCCTCAATCGTT CCGTGGTTTTTCAAGTTCTCTGTGACGGCAGGGTGTCTGTACAACATCAGCGCCATGTTCACAAAAGTTTCGATT CTTGCATTCTATCTCCGCATTTTCTCCCCCGCGCGCAGCGCCCGAGCTCTTATCTGGTGTGGAATTATATTCATT GTTCTGGGATACATGACTCTTACCATCGCCATGCTGGCCTGGATGGTCCCCCATCGGGGGGACGGGGGGTGGGGG TCGACGGCCAATACAGAACGGATGAACGTCGCATCCAGACAACTCGACTTTACACAAGGCATATTCAGTGTTGTC TCCGACTTCTATGTCATCACCATCCCCACTGGCATTATCTATCGCCTGAATATGAAAACCCAGAAGAAGATTGGT GTTGCGTGTATCTTTCTCTTCGGTTTCGTGTCGCTTGGTTGCTCTATAGCCGGCACAGTTCTTCGTTATCACGCC ATGGTTTTCACTGTAGTTGACAACCGGTGGCTCTCCGTCAAATTTGAAGCACTATGCGTGGTCGAGCTTAATATC GGAGTCCTCTGCGCTTGCGTTCCCGTTTTCTTTGTCGTGTTGCGCACCTGGAAGCAAAGAACTGAAACTGGGTTC GCTTACCTCAAACAACGGCTGTTGACATCTCCAGGAAGTAAAGAGACGGTGGTCCTGGGCGAGCGGCAGCAGAAA CCTGGAGTCTCCCTTGATATTCCGACCGGCACCTTGTCGGGACTGAAGACTTTCTTCCACAAACTGAAGCCGGAT CAGGAAACAGTCAAGTCTGGTATTCGTGTGTCGCATTATTTTGAGCTACAGTCTGTCGACATTGATTATCATGCT CACATCAGGGGCGATGCGGCCAGTGGAAGGAACCCGTCGTTGGCTGGCAGCAAAGGGGTCTCTCGAGGGGCCTCT CGAGGGGGTGTTTAG |
| Transcript | >Ani_SJS72_1|g6998.t1 ATGAATCTTTCAGAAATTCCCATGTCACAACCCCCTCCGGGGCAAGTGACCAATTTCGTGGACCCGGTGTCCATC TCTTGGGCGGGGCGGTTGTCCATTTGGTTGACCTTACCTATCATGGCAGTAGCCTTTGTCTTGCGGATTTATGTC CGTCTGAAATCACGGCAAATGGGAATAGATGACTATTTTCTGGTCGTCGGAGCCGTCGGCGCTGCTTCATTTTGT GGGACACTTATTCCCATTTTCCTCAAAGATGTCTGGGGACGTCATGCGTGGGACATCCCCGTCTCCTCAATCGTT CCGTGGTTTTTCAAGTTCTCTGTGACGGCAGGGTGTCTGTACAACATCAGCGCCATGTTCACAAAAGTTTCGATT CTTGCATTCTATCTCCGCATTTTCTCCCCCGCGCGCAGCGCCCGAGCTCTTATCTGGTGTGGAATTATATTCATT GTTCTGGGATACATGACTCTTACCATCGCCATGCTGGCCTGGATGGTCCCCCATCGGGGGGACGGGGGGTGGGGG TCGACGGCCAATACAGAACGGATGAACGTCGCATCCAGACAACTCGACTTTACACAAGGCATATTCAGTGTTGTC TCCGACTTCTATGTCATCACCATCCCCACTGGCATTATCTATCGCCTGAATATGAAAACCCAGAAGAAGATTGGT GTTGCGTGTATCTTTCTCTTCGGTTTCGTGTCGCTTGGTTGCTCTATAGCCGGCACAGTTCTTCGTTATCACGCC ATGGTTTTCACTGTAGTTGACAACCGGTGGCTCTCCGTCAAATTTGAAGCACTATGCGTGGTCGAGCTTAATATC GGAGTCCTCTGCGCTTGCGTTCCCGTTTTCTTTGTCGTGTTGCGCACCTGGAAGCAAAGAACTGAAACTGGGTTC GCTTACCTCAAACAACGGCTGTTGACATCTCCAGGAAGTAAAGAGACGGTGGTCCTGGGCGAGCGGCAGCAGAAA CCTGGAGTCTCCCTTGATATTCCGACCGGCACCTTGTCGGGACTGAAGACTTTCTTCCACAAACTGAAGCCGGAT CAGGAAACAGTCAAGTCTGGTATTCGTGTGTCGCATTATTTTGAGCTACAGTCTGTCGACATTGATTATCATGCT CACATCAGGGGCGATGCGGCCAGTGGAAGGAACCCGTCGTTGGCTGGCAGCAAAGGGGTCTCTCGAGGGGCCTCT CGAGGGGGTGTTTAG |
| Gene | >Ani_SJS72_1|g6998.t1 ATGAATCTTTCAGAAATTCCCATGTCACAACCCCCTCCGGGGCAAGTGACCAATTTCGTGGACCCGGTGTCCATC TCTTGGGCGGGGCGGTTGTCCATTTGGTTGACCTTACCTATCATGGCAGTAGCCTTTGTCTTGCGGATTTATGTC CGTCTGAAATCACGGCAAATGGGAATAGATGACTGTAGGTACCCATCAAGATTCCGACTCATCGCAATCAATGCC TGATACTGACTGCGACTTCAGATTTTCTGGTCGTCGGAGCCGTGAGTATTCACTCAGTATTATATATCCAATAAA ACCCCTCTGTTCCTCACAACCAGCTCTTTTATCTACTAGGTCGGCGCTGCTTCATTTTGTGGGACACTTATTCCC ATTTGTACGTCGCCCTCTAGCCTCTTTTTTGCACTCGCGGGTTTAGTTGGCTTATTTTTGAACCAGTCCTCAAAG ATGTCTGGGGACGTCATGCGTGGGACATCCCCGTCTCCTCAATCGTTCCGTGGTTTTTCAAGGTATGGTGCTCGT CCAGGTTATTCCAATCATTGCGCAACCTTCCAACTTTTACATCAATAGTTCTCTGTGACGGCAGGGTGTCTGTAC AACATCAGCGCCATGTTCACAAAAGTTTCGATTCTTGCATTCTATCTCCGCATTTTCTCCCCCGCGCGCAGCGCC CGAGCTCTTATCTGGTGTGGAATTATATTCATTGTTCTGGGATACATGACTCTTACCATCGCCATGCTGGCCTGG ATGGTCCCCCATCGGGGGGACGGGGGGTGGGGGTCGACGGCCAATACAGAACGGATGAACGTCGCATCCAGACAA CTCGACTTTACACAAGGCATATTCAGTGTTGTCTCCGACTTCTATGTCATCACCATCCCCACTGGCATTATCTAT CGCCTGAATATGAAAACCCAGAAGAAGATTGGTGTTGCGTGTATCTTTCTCTTCGGTTTCGTGTAAGTGATCGGT TCCTGTCAAGGCATCAGCGCTTGTACCGAAGACTAACACCCTACCACCAGGTCGCTTGGTTGCTCTATAGCCGGC ACAGTTCTTCGTTATCACGCCATGGTTTTCACTGTAGTTGACAACCGGTGGCTCTCCGTCAAATTTGAAGCACTA TGGTAAGTAACATGGCTTTGATCGCCACTTAGCCCAGCCCCGGTCTTGGTGTATTCCAGTTCTGATAGGCTTTTC TCCAGCGTGGTCGAGCTTAATATCGGAGTCCTCTGCGCTTGCGTTCCCGTTTTCTTTGTCGTGTTGCGCACCTGG AAGCAAAGAACTGAAACTGGGTTCGCTTACCTCAAACAACGGCTGTTGACATCTCCAGGAAGTAAAGAGACGGTG GTCCTGGGCGAGCGGCAGCAGAAACCTGGAGTCTCCCTTGATATTCCGACCGGCACCTTGTCGGGACTGAAGACT TTCTTCCACAAACTGAAGCCGGATCAGGAAACAGTCAAGTCTGGTATTCGTGTGTCGCATTATTTTGAGCTACAG TCTGTCGACATTGATTATCATGCTCACATCAGGGGCGATGCGGCCAGTGGAAGGAACCCGTCGTTGGCTGGCAGC AAAGGGGTCTCTCGAGGGGCCTCTCGAGGGGGTGTTTAG |