Protein ID | Ani_SJS72_1|g6996.t1 |
Gene name | |
Location | scaffold_054:218608..220078 |
Strand | - |
Gene length (bp) | 1470 |
Transcript length (bp) | 1416 |
Coding sequence length (bp) | 1416 |
Protein length (aa) | 472 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF01490 | Aa_trans | Transmembrane amino acid transporter protein | 1.3E-58 | 56 | 449 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 59 | 0.45 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 60 | 82 | 22 |
2 | 86 | 108 | 22 |
3 | 135 | 157 | 22 |
4 | 167 | 189 | 22 |
5 | 194 | 216 | 22 |
6 | 244 | 263 | 19 |
7 | 276 | 298 | 22 |
8 | 318 | 340 | 22 |
9 | 360 | 379 | 19 |
10 | 389 | 411 | 22 |
11 | 424 | 446 | 22 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS72_1|g6996.t1 MESSIGNLEAGNGSNKFNKEPLPAKLNAWVDGKLPDAVDDGEQQIIEAGEAKYHRLGWKGLTVMLIVEAIGLGSL SIPSAFASLGMVAGVICCVGIGLIAIYTSYVIGQVKLAFPAVRDYGDAGALLMGTWGRELFTFMLILQLIFLTGS NCLTGTIALRHITSSGICSVVWSVVSAVILLLLSIPSSFADMAWLGYVDFISIVAAIGITIIATGIRGTDSTGGL AAVDWSATPQGDPTFSDGFIAISNIVFAYTFASCLFSFMDEMHTPKEFTKSIWSLGILQIVIYTVTGATIYAFVG VDVQSPALLSAGTLVSKVAFGIALPVIFISGAICTIVAGRLIHGRIYANSVTKYINTPKGWITWLTVITILTIIS WVIAEAIPFFDDLLSITSALFTSGFSFYLPPIMWYVLIRKGPWYSKENLLTSLVNLFVFIFGLVVLVGGLYSSIQ DIRLNYREGDVNSPFTCGEVS* |
Coding | >Ani_SJS72_1|g6996.t1 ATGGAGTCTTCAATTGGCAATTTAGAGGCCGGCAATGGGAGTAATAAGTTCAACAAGGAGCCACTCCCCGCAAAG CTGAACGCCTGGGTCGATGGCAAGCTGCCTGACGCTGTGGACGATGGGGAACAGCAGATCATCGAGGCTGGAGAA GCCAAGTATCATCGCCTCGGCTGGAAGGGTCTAACGGTCATGCTCATTGTGGAGGCCATTGGCCTAGGATCGTTA TCTATTCCTTCCGCGTTCGCATCGCTCGGCATGGTGGCCGGCGTTATCTGCTGCGTCGGCATCGGCTTGATAGCC ATTTACACCTCGTACGTGATTGGACAGGTGAAGCTCGCCTTCCCGGCTGTTCGGGATTATGGTGATGCGGGTGCC TTGCTGATGGGTACCTGGGGTCGGGAACTATTCACCTTCATGTTGATCCTCCAGCTGATCTTCCTGACGGGTTCC AACTGCTTAACCGGCACCATTGCCCTTCGCCATATCACCTCTAGTGGCATCTGCTCCGTTGTCTGGAGCGTGGTA TCCGCGGTGATTCTTCTCTTGCTCTCTATCCCTTCTTCTTTTGCCGATATGGCCTGGCTTGGCTATGTGGACTTC ATTTCCATCGTGGCAGCCATTGGAATCACTATCATCGCTACTGGCATCCGGGGTACGGATTCCACCGGGGGCTTG GCAGCCGTGGACTGGTCAGCTACACCGCAGGGCGATCCTACCTTCTCAGATGGTTTCATCGCGATTAGCAATATT GTCTTTGCGTACACCTTTGCCAGCTGCCTCTTTTCTTTCATGGATGAGATGCATACCCCTAAGGAATTTACCAAA TCCATCTGGTCTCTTGGCATCCTCCAGATCGTCATTTACACTGTCACGGGCGCCACTATCTACGCCTTCGTGGGT GTCGATGTCCAGTCTCCTGCCTTGCTTTCAGCTGGAACGCTTGTTAGCAAGGTCGCCTTTGGCATTGCCCTTCCA GTCATTTTCATTTCCGGCGCTATCTGCACCATCGTGGCTGGACGCTTGATTCACGGCCGGATCTACGCCAACAGT GTGACCAAGTACATCAACACGCCCAAGGGCTGGATCACGTGGCTTACTGTTATCACTATCTTGACCATCATCTCG TGGGTCATTGCTGAGGCTATTCCGTTCTTCGATGACCTTCTCTCCATCACATCGGCATTGTTCACCTCTGGTTTC TCCTTCTACCTTCCCCCAATCATGTGGTATGTCCTCATCCGCAAGGGCCCATGGTACTCCAAGGAGAACTTGTTG ACCAGTCTGGTGAATCTGTTTGTCTTTATCTTTGGTCTTGTTGTTCTTGTTGGTGGTCTTTACTCGAGTATTCAG GATATACGACTTAATTACCGTGAAGGTGATGTCAACAGCCCCTTCACTTGTGGTGAAGTTTCATAA |
Transcript | >Ani_SJS72_1|g6996.t1 ATGGAGTCTTCAATTGGCAATTTAGAGGCCGGCAATGGGAGTAATAAGTTCAACAAGGAGCCACTCCCCGCAAAG CTGAACGCCTGGGTCGATGGCAAGCTGCCTGACGCTGTGGACGATGGGGAACAGCAGATCATCGAGGCTGGAGAA GCCAAGTATCATCGCCTCGGCTGGAAGGGTCTAACGGTCATGCTCATTGTGGAGGCCATTGGCCTAGGATCGTTA TCTATTCCTTCCGCGTTCGCATCGCTCGGCATGGTGGCCGGCGTTATCTGCTGCGTCGGCATCGGCTTGATAGCC ATTTACACCTCGTACGTGATTGGACAGGTGAAGCTCGCCTTCCCGGCTGTTCGGGATTATGGTGATGCGGGTGCC TTGCTGATGGGTACCTGGGGTCGGGAACTATTCACCTTCATGTTGATCCTCCAGCTGATCTTCCTGACGGGTTCC AACTGCTTAACCGGCACCATTGCCCTTCGCCATATCACCTCTAGTGGCATCTGCTCCGTTGTCTGGAGCGTGGTA TCCGCGGTGATTCTTCTCTTGCTCTCTATCCCTTCTTCTTTTGCCGATATGGCCTGGCTTGGCTATGTGGACTTC ATTTCCATCGTGGCAGCCATTGGAATCACTATCATCGCTACTGGCATCCGGGGTACGGATTCCACCGGGGGCTTG GCAGCCGTGGACTGGTCAGCTACACCGCAGGGCGATCCTACCTTCTCAGATGGTTTCATCGCGATTAGCAATATT GTCTTTGCGTACACCTTTGCCAGCTGCCTCTTTTCTTTCATGGATGAGATGCATACCCCTAAGGAATTTACCAAA TCCATCTGGTCTCTTGGCATCCTCCAGATCGTCATTTACACTGTCACGGGCGCCACTATCTACGCCTTCGTGGGT GTCGATGTCCAGTCTCCTGCCTTGCTTTCAGCTGGAACGCTTGTTAGCAAGGTCGCCTTTGGCATTGCCCTTCCA GTCATTTTCATTTCCGGCGCTATCTGCACCATCGTGGCTGGACGCTTGATTCACGGCCGGATCTACGCCAACAGT GTGACCAAGTACATCAACACGCCCAAGGGCTGGATCACGTGGCTTACTGTTATCACTATCTTGACCATCATCTCG TGGGTCATTGCTGAGGCTATTCCGTTCTTCGATGACCTTCTCTCCATCACATCGGCATTGTTCACCTCTGGTTTC TCCTTCTACCTTCCCCCAATCATGTGGTATGTCCTCATCCGCAAGGGCCCATGGTACTCCAAGGAGAACTTGTTG ACCAGTCTGGTGAATCTGTTTGTCTTTATCTTTGGTCTTGTTGTTCTTGTTGGTGGTCTTTACTCGAGTATTCAG GATATACGACTTAATTACCGTGAAGGTGATGTCAACAGCCCCTTCACTTGTGGTGAAGTTTCATAA |
Gene | >Ani_SJS72_1|g6996.t1 ATGGAGTCTTCAATTGGCAATTTAGAGGCCGGCAATGGGAGTAATAAGTTCAACAAGGAGCCACTCCCCGCAAAG CTGAACGCCTGGGTCGATGGCAAGCTGCCTGACGCTGTGGACGATGGGGAACAGCAGATCATCGAGGCTGGAGAA GCCAAGTATCATCGCCTCGGCTGGAAGGGTCTAACGGTCATGCTCATTGTGGAGGCCATTGGCCTAGGATCGTTA TCTATTCCTTCCGCGTTCGCATCGCTCGGCATGGTGGCCGGCGTTATCTGCTGCGTCGGCATCGGCTTGATAGCC ATTTACACCTCGTACGTGATTGGACAGGTGAAGCTCGCCTTCCCGGCTGTTCGGGATTATGGTGATGCGGGTGCC TTGCTGATGGGTACCTGGGGTCGGGAACTATTCACCTTCATGTTGATCCTCCAGCTGATCTTCCTGACGGGTTCC AACTGCTTAACCGGCACCATTGCCCTTCGCCATATCACCTCTAGTGGCATCTGCTCCGTTGTCTGGAGCGTGGTA TCCGCGGTGATTCTTCTCTTGCTCTCTATCCCTTCTTCTTTTGCCGATATGGCCTGGCTTGGCTATGTGGACTTC ATTTCCATCGTGGCAGCCATTGGAATCACTATCATCGCTACTGGCATCCGGGGTACGGATTCCACCGGGGGCTTG GCAGCCGTGGACTGGTCAGCTACACCGCAGGGCGATCCTACCTTCTCAGATGGTTTCATCGCGATTAGCAATATT GTCTTTGCGTACACCTTTGCCAGCTGCCTCTTTTCTTTCATGGATGAGATGCATACCCCTAAGGAATTTACCAAA TCCATCTGGTCTCTTGGCATCCTCCAGATCGTCATTTACACTGTCACGGGCGCCACTATCTACGCCTTCGTGGGT GTCGATGTCCAGTCTCCTGCCTTGCTTTCAGCTGGAACGCTTGTTAGCAAGGTCGCCTTTGGCATTGCCCTTCCA GTCATTTTCATTTCCGGCGCTATCTGCACCATCGTGGCTGGACGCTTGATTCACGGCCGGATCTACGCCAACAGT GTGACCAAGTACATCAACACGCCCAAGGGCTGGATCACGTGGCTTACTGTTATCACTATCTTGACCATCATCTCG TGGGTCATTGCTGAGGCTATTCCGTTCTTCGATGACCTTCTCTCCATCACATCGGCATTGTTCACCTCTGGTTTC TCCTTCTACCTTCCCCCAATCATGTGGTATGTCCTCATCCGCAAGGGCCCATGGTACTCCAAGGAGAACTTGTTG ACCAGTCTGGTGAATCTGTTTGTCTTTATCTTTGGTCTTGTTGTTCTTGTTGGTGGTCTTTACTCGAGTATTCAG GATATAGTAAGTTATCTAACCCTCCTTTCAAATTGAGTTGTCACTAATCATGTCCAACAGCGACTTAATTACCGT GAAGGTGATGTCAACAGCCCCTTCACTTGTGGTGAAGTTTCATAA |