Protein ID | Ani_SJS72_1|g6974.t1 |
Gene name | |
Location | scaffold_054:146528..148300 |
Strand | + |
Gene length (bp) | 1772 |
Transcript length (bp) | 1578 |
Coding sequence length (bp) | 1578 |
Protein length (aa) | 526 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF13181 | TPR_8 | Tetratricopeptide repeat | 6.8E-04 | 37 | 67 |
PF00564 | PB1 | PB1 domain | 9.1E-06 | 437 | 520 |
GO Term | Description | Terminal node |
---|---|---|
GO:0005515 | protein binding | Yes |
GO:0003674 | molecular_function | No |
GO:0005488 | binding | No |
Orthofinder run ID | 3 |
Orthogroup | 7554 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS72_1|g6974.t1 MSLKQEIETWVQALDHYDNQEYDEALRVFGAIAETSKILFNCGVIYATLGEHERAVDCYQRAVGLDQYLAIAYFQ EGVSNFLLGDFEEALANFNDTLLYLRGNTSIDYEQLGLKFRLFSCEVLFNRGLCYIYLQQMGPGMQDLQYASKEK VTPDHDVIDDAIREQAAGYTVFSIPVGVVYRPNEAKVKNLKAKDYLGKSRLIAASERSSMPSAASDDLKRTMSML DHRKPETLPFATSHLVHKNLQSRSRQQSEPPLNRNLFPPTPPPDADKASTNSSTGSLAMNSRPGSIRAARPPRLD LERPANTAGHSTETLVDKPRIGTTRTASESRAGPGRPGPGPRGPGESHGHRRGMSDTGFAPTVSPEETYSGTRSM PAGASWRRQQERYIDEQEEYASDAYEDHGPDGEFEIMGTRPQASPNRGSRRGTSRRPEVRKFRVKAHSREDTRYI MMEPTIEFREFESRIRDKFGFRTLLRIRMQDDGDMITMVDQEDLDLLMAGSREMARREGSEMGKMEIWVEERGVI * |
Coding | >Ani_SJS72_1|g6974.t1 ATGTCCTTGAAGCAGGAAATTGAGACCTGGGTACAGGCCCTAGACCACTACGATAACCAGGAATATGATGAAGCT CTTAGGGTCTTTGGTGCGATTGCAGAGACTTCCAAGATCCTCTTCAACTGCGGGGTCATCTATGCCACGTTAGGA GAGCATGAACGAGCTGTTGATTGCTACCAGCGGGCTGTTGGCCTGGATCAGTACCTGGCTATTGCCTACTTCCAA GAGGGAGTGTCCAACTTCCTTCTGGGGGACTTTGAGGAGGCATTGGCTAATTTCAATGACACGCTGCTCTACCTC CGGGGCAACACTTCCATCGACTACGAGCAGTTGGGCTTGAAGTTCCGGCTGTTCTCCTGTGAGGTGTTGTTCAAT CGGGGCCTGTGCTATATTTACCTGCAGCAAATGGGCCCTGGCATGCAAGACCTGCAATACGCATCGAAAGAGAAG GTCACGCCCGACCACGATGTGATCGACGATGCCATTCGTGAACAAGCGGCGGGCTACACGGTCTTTTCGATTCCG GTTGGGGTGGTGTACCGACCCAACGAGGCCAAGGTCAAGAACCTCAAGGCGAAAGACTACCTGGGCAAGTCCCGG TTGATTGCCGCGTCCGAGCGCAGCAGCATGCCGTCCGCCGCCAGCGACGACCTCAAGCGGACCATGTCCATGCTG GACCACCGCAAGCCAGAGACGCTGCCGTTTGCCACGTCACACCTGGTGCATAAGAACCTGCAGAGTCGGAGCCGT CAGCAATCGGAGCCGCCTCTGAACCGTAATCTCTTCCCTCCTACTCCCCCGCCGGACGCAGACAAGGCGAGTACC AACAGCTCCACAGGTAGTCTCGCGATGAACAGTCGACCGGGCTCCATCCGGGCAGCGCGGCCGCCCCGGCTCGAC CTGGAACGGCCGGCCAACACCGCGGGCCACAGTACCGAAACGCTGGTCGACAAGCCGCGGATCGGCACGACGCGC ACGGCGTCCGAGTCGCGGGCAGGTCCGGGTCGACCGGGGCCGGGGCCGCGAGGGCCGGGCGAGTCCCACGGCCAT CGACGAGGCATGAGTGACACGGGCTTTGCCCCGACGGTGAGCCCGGAGGAGACGTACTCGGGTACCCGATCGATG CCAGCGGGAGCCAGCTGGCGCCGTCAGCAAGAACGGTATATTGACGAGCAGGAAGAGTATGCCAGTGATGCGTAC GAGGACCACGGGCCGGACGGTGAGTTTGAGATCATGGGGACGCGGCCACAGGCGTCCCCGAACCGGGGATCGCGG CGGGGGACGTCACGGCGGCCAGAGGTGCGCAAGTTCCGGGTGAAGGCGCATTCACGAGAAGATACACGGTACATC ATGATGGAACCGACGATTGAGTTTAGAGAGTTTGAGAGTCGGATTCGCGACAAGTTTGGATTCCGCACGCTGCTG CGAATCCGCATGCAGGACGACGGGGACATGATTACGATGGTGGACCAGGAGGATCTAGACTTGTTGATGGCAGGA TCGCGCGAGATGGCACGACGAGAGGGAAGCGAGATGGGGAAGATGGAGATATGGGTTGAGGAGCGAGGCGTGATT TAG |
Transcript | >Ani_SJS72_1|g6974.t1 ATGTCCTTGAAGCAGGAAATTGAGACCTGGGTACAGGCCCTAGACCACTACGATAACCAGGAATATGATGAAGCT CTTAGGGTCTTTGGTGCGATTGCAGAGACTTCCAAGATCCTCTTCAACTGCGGGGTCATCTATGCCACGTTAGGA GAGCATGAACGAGCTGTTGATTGCTACCAGCGGGCTGTTGGCCTGGATCAGTACCTGGCTATTGCCTACTTCCAA GAGGGAGTGTCCAACTTCCTTCTGGGGGACTTTGAGGAGGCATTGGCTAATTTCAATGACACGCTGCTCTACCTC CGGGGCAACACTTCCATCGACTACGAGCAGTTGGGCTTGAAGTTCCGGCTGTTCTCCTGTGAGGTGTTGTTCAAT CGGGGCCTGTGCTATATTTACCTGCAGCAAATGGGCCCTGGCATGCAAGACCTGCAATACGCATCGAAAGAGAAG GTCACGCCCGACCACGATGTGATCGACGATGCCATTCGTGAACAAGCGGCGGGCTACACGGTCTTTTCGATTCCG GTTGGGGTGGTGTACCGACCCAACGAGGCCAAGGTCAAGAACCTCAAGGCGAAAGACTACCTGGGCAAGTCCCGG TTGATTGCCGCGTCCGAGCGCAGCAGCATGCCGTCCGCCGCCAGCGACGACCTCAAGCGGACCATGTCCATGCTG GACCACCGCAAGCCAGAGACGCTGCCGTTTGCCACGTCACACCTGGTGCATAAGAACCTGCAGAGTCGGAGCCGT CAGCAATCGGAGCCGCCTCTGAACCGTAATCTCTTCCCTCCTACTCCCCCGCCGGACGCAGACAAGGCGAGTACC AACAGCTCCACAGGTAGTCTCGCGATGAACAGTCGACCGGGCTCCATCCGGGCAGCGCGGCCGCCCCGGCTCGAC CTGGAACGGCCGGCCAACACCGCGGGCCACAGTACCGAAACGCTGGTCGACAAGCCGCGGATCGGCACGACGCGC ACGGCGTCCGAGTCGCGGGCAGGTCCGGGTCGACCGGGGCCGGGGCCGCGAGGGCCGGGCGAGTCCCACGGCCAT CGACGAGGCATGAGTGACACGGGCTTTGCCCCGACGGTGAGCCCGGAGGAGACGTACTCGGGTACCCGATCGATG CCAGCGGGAGCCAGCTGGCGCCGTCAGCAAGAACGGTATATTGACGAGCAGGAAGAGTATGCCAGTGATGCGTAC GAGGACCACGGGCCGGACGGTGAGTTTGAGATCATGGGGACGCGGCCACAGGCGTCCCCGAACCGGGGATCGCGG CGGGGGACGTCACGGCGGCCAGAGGTGCGCAAGTTCCGGGTGAAGGCGCATTCACGAGAAGATACACGGTACATC ATGATGGAACCGACGATTGAGTTTAGAGAGTTTGAGAGTCGGATTCGCGACAAGTTTGGATTCCGCACGCTGCTG CGAATCCGCATGCAGGACGACGGGGACATGATTACGATGGTGGACCAGGAGGATCTAGACTTGTTGATGGCAGGA TCGCGCGAGATGGCACGACGAGAGGGAAGCGAGATGGGGAAGATGGAGATATGGGTTGAGGAGCGAGGCGTGATT TAG |
Gene | >Ani_SJS72_1|g6974.t1 ATGTCCTTGAAGCAGGTACGTATCCCCGCAACTAGGGTTTAGGGTGATGGCTAATGAGACTAGGAAATTGAGACC TGGGTACAGGCCCTAGACCACTACGATAACCAGGAATATGATGAAGCTCTTAGGGTCTTTGGTGCGATTGCAGAG ACTTCCAAGATCCTCTTCAACTGCGGGGTCATCTATGCCACGTTAGGAGAGCATGAACGAGCTGTATGACACCCG GCCATCTGCCCGGACGTTACTGACGAGGAACAGGTTGATTGCTACCAGCGGGCTGTTGGCCTGGATCAGTACCTG GCTATTGCCTACTTCCAAGAGGGAGTGTCCAACTTCCTTCTGGGGGACTTTGAGGAGGCATTGGCTAATTTCAAT GACACGCTGCTCTACCTCCGGGGCAACACTTCCATCGACTACGAGCAGTTGGGCTTGAAGTTCCGGCTGTTCTCC TGTGAGGTGTTGTTCAATCGGGGCCTGTGCTATATTTACCTGCAGCAAATGGGCCCTGGCATGCAAGACCTGCAA TACGCATCGAAAGAGAAGGTCACGCCCGACCACGATGTGATCGACGATGCCATTCGTGAACAAGCGGCGGTAGGT CAGCTTCCTCTTGTGAGGGTGATGGTACTGACGGATTAGGGCTACACGGTCTTTTCGATTCCGGTTGGGGTGGTG TACCGACCCAACGAGGCCAAGGTCAAGAACCTCAAGGCGAAAGACTACCTGGGCAAGTCCCGGTTGATTGCCGCG TCCGAGCGCAGCAGCATGCCGTCCGCCGCCAGCGACGACCTCAAGCGGACCATGTCCATGCTGGACCACCGCAAG CCAGAGACGCTGCCGTTTGCCACGTCACACCTGGTGCATAAGAACCTGCAGAGTCGGAGCCGTCAGCAATCGGAG CCGCCTCTGAACCGTAATCTCTTCCCTCCTACTCCCCCGCCGGACGCAGACAAGGCGAGTACCAACAGCTCCACA GGTAGTCTCGCGATGAACAGTCGACCGGGCTCCATCCGGGCAGCGCGGCCGCCCCGGCTCGACCTGGAACGGCCG GCCAACACCGCGGGCCACAGTACCGAAACGCTGGTCGACAAGCCGCGGATCGGCACGACGCGCACGGCGTCCGAG TCGCGGGCAGGTCCGGGTCGACCGGGGCCGGGGCCGCGAGGGCCGGGCGAGTCCCACGGCCATCGACGAGGCATG AGTGACACGGGCTTTGCCCCGACGGTGAGCCCGGAGGAGACGTACTCGGGTACCCGATCGATGCCAGCGGGAGCC AGCTGGCGCCGTCAGCAAGAACGGTATATTGACGAGCAGGAAGAGTATGCCAGTGATGCGTACGAGGACCACGGG CCGGACGGTGAGTTTGAGATCATGGGGACGCGGCCACAGGCGTCCCCGAACCGGGGATCGCGGCGGGGGACGTCA CGGCGGCCAGAGGTGCGCAAGTTCCGGGTGAAGGCGCATTCACGAGAAGATACACGGTACATCATGATGGAACCG ACGATTGAGTTTAGAGAGTTTGAGAGTCGGATTCGCGACAAGTTTGGATTCCGCACGCTGCTGCGAATCCGCATG CAGGACGACGGGGACATGATTACGATGGTGGACCAGGAGGATCTAGACTTGTTGATGGCAGGATCGCGCGAGATG GCACGACGAGAGGGAAGCGAGATGGGGAAGATGGAGGTATGCCCACTCTCTGTTAAGAAGAAAAGTAAGACATCA TGCTAACCAATGACAAGATATGGGTTGAGGAGCGAGGCGTGATTTAG |