© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS72_1|g6956.t1 |
| Gene name | |
| Location | scaffold_054:104832..106661 |
| Strand | - |
| Gene length (bp) | 1829 |
| Transcript length (bp) | 1599 |
| Coding sequence length (bp) | 1599 |
| Protein length (aa) | 533 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF13520 | AA_permease_2 | Amino acid permease | 2.5E-61 | 32 | 480 |
| PF00324 | AA_permease | Amino acid permease | 1.6E-14 | 58 | 487 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0055085 | transmembrane transport | Yes |
| GO:0016020 | membrane | Yes |
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0009987 | cellular process | No |
| GO:0110165 | cellular anatomical entity | No |
| GO:0005215 | transporter activity | No |
| GO:0005575 | cellular_component | No |
| GO:0003674 | molecular_function | No |
| GO:0006810 | transport | No |
| GO:0008150 | biological_process | No |
| GO:0051234 | establishment of localization | No |
| GO:0051179 | localization | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 62 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 38 | 57 | 19 |
| 2 | 67 | 89 | 22 |
| 3 | 120 | 142 | 22 |
| 4 | 157 | 174 | 17 |
| 5 | 187 | 204 | 17 |
| 6 | 224 | 246 | 22 |
| 7 | 267 | 289 | 22 |
| 8 | 316 | 338 | 22 |
| 9 | 368 | 390 | 22 |
| 10 | 400 | 422 | 22 |
| 11 | 434 | 456 | 22 |
| 12 | 471 | 493 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS72_1|g6956.t1 MSVAPKDVFGHGTEEDLTLEHLGYQQEFKRSFGLLDMIGFSFSIVTCWSALSGVFIIGVDAGGPPVMLFGWLGVC VITFAVALSMAEWCSRWPVAGGQYSWVFLLAPPKIAREMSYITGWFMLMGILAMGSANNSFAANFILGQANLVYP EYVIERWHTVLVTYAVAIWALLVNTFMPHLLNRLSRAILLWNVCSFVIIVVVLLATNKDKQDAAFVFQDFQNTTG FGSAMATMVGILQSFFGMCCYDTPSHMTEEMTHASRDAPKAMVMSVGMGAVTGFIFLLTLCFCIGDIDATANSST GVPVLQIFYDSTHSKVAACFMTSMMTVIMMVASVSLVAEGSRALFAFARDRGMPFSGILSQVEKRRKIPIYAILF TVVVQMAFNSIYFGTVTGFDTVVSIATTGFYVSYALVLLARLLGYFFGHDIAPVDGPYSFPLPISLGLHGLGFLF LFFAFITFNFPSDAPVTPNSMNYTSAAIGLIALLSIFTWLITARKQFKGPADVQDLVVDGVEQVGEAGEGSASCS EKGKPDT* |
| Coding | >Ani_SJS72_1|g6956.t1 ATGTCTGTGGCGCCCAAAGATGTCTTCGGCCATGGCACCGAAGAAGACCTCACGCTTGAGCACTTGGGTTATCAG CAAGAATTCAAGCGGTCGTTCGGCCTCTTGGATATGATAGGTTTCAGTTTTAGCATCGTTACTTGCTGGAGTGCA TTGAGCGGTGTATTCATCATTGGAGTAGATGCCGGTGGTCCACCGGTTATGCTCTTCGGATGGTTAGGCGTGTGT GTAATTACTTTTGCGGTTGCCCTATCCATGGCAGAATGGTGCTCAAGGTGGCCCGTGGCCGGAGGGCAGTATTCA TGGGTCTTTCTGCTGGCTCCACCAAAGATCGCTCGAGAGATGTCGTATATAACTGGGTGGTTCATGCTAATGGGT ATCCTTGCCATGGGCTCTGCGAACAACTCATTTGCGGCCAACTTCATCCTGGGACAAGCAAATCTGGTATATCCT GAGTATGTGATTGAACGATGGCATACTGTCTTGGTCACTTATGCCGTCGCGATCTGGGCTCTCCTGGTCAATACA TTCATGCCACACCTGCTCAACCGCCTATCCCGGGCTATCCTGCTGTGGAACGTTTGCTCGTTCGTCATCATCGTC GTAGTTCTACTAGCAACCAACAAAGACAAACAAGATGCCGCATTTGTATTTCAGGATTTTCAGAACACAACCGGT TTCGGATCCGCAATGGCAACAATGGTCGGAATTCTTCAAAGCTTCTTCGGCATGTGCTGCTACGATACCCCAAGC CACATGACAGAAGAAATGACACATGCCTCGCGAGATGCACCCAAAGCCATGGTCATGTCTGTTGGTATGGGCGCT GTAACGGGGTTCATTTTTCTATTGACGCTCTGCTTCTGCATCGGCGACATCGATGCCACTGCAAACTCCTCCACA GGCGTCCCCGTGCTGCAGATCTTCTACGACTCAACCCATAGCAAAGTCGCCGCCTGCTTCATGACCAGTATGATG ACAGTAATTATGATGGTAGCATCAGTAAGTCTTGTCGCAGAGGGCTCTCGAGCACTATTCGCATTCGCACGAGAC CGGGGAATGCCATTCTCAGGGATCTTATCCCAAGTGGAGAAGAGGAGAAAGATCCCGATATATGCGATATTGTTC ACCGTTGTGGTGCAAATGGCTTTCAACTCGATTTATTTCGGGACCGTTACTGGTTTTGATACGGTTGTGTCTATC GCGACCACGGGGTTCTACGTCTCCTACGCACTGGTCCTCCTTGCTCGACTTCTCGGGTATTTCTTTGGCCATGAC ATCGCCCCAGTCGACGGACCTTACTCCTTCCCGTTGCCCATATCGCTCGGCCTGCACGGCCTAGGGTTTCTATTC CTGTTTTTTGCGTTTATTACCTTCAACTTCCCTTCAGATGCACCAGTCACTCCGAATTCGATGAACTACACTAGT GCGGCGATCGGGTTGATTGCGTTGCTGAGCATTTTCACTTGGCTCATTACGGCCCGGAAGCAATTCAAGGGACCG GCTGATGTGCAGGACTTGGTTGTAGATGGAGTGGAGCAGGTAGGAGAGGCAGGAGAGGGGAGTGCCAGTTGTTCG GAGAAAGGCAAGCCAGATACTTGA |
| Transcript | >Ani_SJS72_1|g6956.t1 ATGTCTGTGGCGCCCAAAGATGTCTTCGGCCATGGCACCGAAGAAGACCTCACGCTTGAGCACTTGGGTTATCAG CAAGAATTCAAGCGGTCGTTCGGCCTCTTGGATATGATAGGTTTCAGTTTTAGCATCGTTACTTGCTGGAGTGCA TTGAGCGGTGTATTCATCATTGGAGTAGATGCCGGTGGTCCACCGGTTATGCTCTTCGGATGGTTAGGCGTGTGT GTAATTACTTTTGCGGTTGCCCTATCCATGGCAGAATGGTGCTCAAGGTGGCCCGTGGCCGGAGGGCAGTATTCA TGGGTCTTTCTGCTGGCTCCACCAAAGATCGCTCGAGAGATGTCGTATATAACTGGGTGGTTCATGCTAATGGGT ATCCTTGCCATGGGCTCTGCGAACAACTCATTTGCGGCCAACTTCATCCTGGGACAAGCAAATCTGGTATATCCT GAGTATGTGATTGAACGATGGCATACTGTCTTGGTCACTTATGCCGTCGCGATCTGGGCTCTCCTGGTCAATACA TTCATGCCACACCTGCTCAACCGCCTATCCCGGGCTATCCTGCTGTGGAACGTTTGCTCGTTCGTCATCATCGTC GTAGTTCTACTAGCAACCAACAAAGACAAACAAGATGCCGCATTTGTATTTCAGGATTTTCAGAACACAACCGGT TTCGGATCCGCAATGGCAACAATGGTCGGAATTCTTCAAAGCTTCTTCGGCATGTGCTGCTACGATACCCCAAGC CACATGACAGAAGAAATGACACATGCCTCGCGAGATGCACCCAAAGCCATGGTCATGTCTGTTGGTATGGGCGCT GTAACGGGGTTCATTTTTCTATTGACGCTCTGCTTCTGCATCGGCGACATCGATGCCACTGCAAACTCCTCCACA GGCGTCCCCGTGCTGCAGATCTTCTACGACTCAACCCATAGCAAAGTCGCCGCCTGCTTCATGACCAGTATGATG ACAGTAATTATGATGGTAGCATCAGTAAGTCTTGTCGCAGAGGGCTCTCGAGCACTATTCGCATTCGCACGAGAC CGGGGAATGCCATTCTCAGGGATCTTATCCCAAGTGGAGAAGAGGAGAAAGATCCCGATATATGCGATATTGTTC ACCGTTGTGGTGCAAATGGCTTTCAACTCGATTTATTTCGGGACCGTTACTGGTTTTGATACGGTTGTGTCTATC GCGACCACGGGGTTCTACGTCTCCTACGCACTGGTCCTCCTTGCTCGACTTCTCGGGTATTTCTTTGGCCATGAC ATCGCCCCAGTCGACGGACCTTACTCCTTCCCGTTGCCCATATCGCTCGGCCTGCACGGCCTAGGGTTTCTATTC CTGTTTTTTGCGTTTATTACCTTCAACTTCCCTTCAGATGCACCAGTCACTCCGAATTCGATGAACTACACTAGT GCGGCGATCGGGTTGATTGCGTTGCTGAGCATTTTCACTTGGCTCATTACGGCCCGGAAGCAATTCAAGGGACCG GCTGATGTGCAGGACTTGGTTGTAGATGGAGTGGAGCAGGTAGGAGAGGCAGGAGAGGGGAGTGCCAGTTGTTCG GAGAAAGGCAAGCCAGATACTTGA |
| Gene | >Ani_SJS72_1|g6956.t1 ATGTCTGTGGCGCCCAAAGATGTCTTCGGCCATGGCACCGAAGAAGACCTCACGCTTGAGCACTTGGGTTATCAG CAAGGTATGACTGGGATCGCTGTGAATTTTAGATCAATAGTGTACTTACTAACGTTATTATCCCTAGAATTCAAG CGGTCGTTCGGCCTCTTGGATATGATAGGTTTCAGTTTTAGCATCGTTACTTGGTTGTCCACACCAACCCTACTA TGTCGAACGATTGACTGACATCTACGAATAGCTGGAGTGCATTGAGCGGTGTATTCATCATTGGAGTAGATGCCG GTGGTCCACCGGTTATGCTCTTCGGATGGTTAGGCGTGTGTGTAATTACTTTTGCGGTTGCCCTATCCATGGCAG AATGGTGCTCAAGGTGGCCCGTGGCCGGAGGGCAGTATTCATGGGTCTTTCTGCTGGCTCCACCAAAGATCGCTC GAGAGATGTCGTATATAACTGGGTGGTTCATGCTAATGGGTAAGCGACAGTATACCTCCAGACCTATGTTGCACA ATGCTCAGTCGAAACAGGTATCCTTGCCATGGGCTCTGCGAACAACTCATTTGCGGCCAACTTCATCCTGGGACA AGCAAATCTGGTATATCCTGAGTATGTGATTGAACGATGGCATACTGTCTTGGTCACTTATGCCGTCGCGATCTG GGCTCTCCTGGTCAATACATTCATGCCACACCTGCTCAACCGCCTATCCCGGGCTATCCTGCTGTGGAACGTTTG CTCGTTCGTCATCATCGTCGTAGTTCTACTAGCAACCAACAAAGACAAACAAGATGCCGCATTTGTATTTCAGGA TTTTCAGAACACAACCGGTTTCGGATCCGCAATGGCAACAATGGTCGGAATTCTTCAAAGCTTCTTCGGCATGTG CTGCTACGATACCCCAAGCCACATGACAGAAGAAATGACACATGCCTCGCGAGATGCACCCAAAGCCATGGTCAT GTCTGTTGGTATGGGCGCTGTAACGGGGTTCATTTTTCTATTGACGCTCTGCTTCTGCATCGGCGACATCGATGC CACTGCAAACTCCTCCACAGGCGTCCCCGTGCTGCAGATCTTCTACGACTCAACCCATAGCAAAGTCGCCGCCTG CTTCATGACCAGTATGATGACAGTAATTATGATGGTAGCATCAGTAAGTCTTGTCGCAGAGGGCTCTCGAGCACT ATTCGCATTCGCACGAGACCGGGGAATGCCATTCTCAGGGATCTTATCCCAAGTGGAGAAGAGGAGAAAGATCCC GATATATGCGATATTGTTCACCGTTGTGGTGCAAATGGCTTTCAACTCGATTTATTTCGGGACCGTTACTGGTTT TGATACGGTTGTGTCTATCGCGACCACGGGGTTCTGTAAGACATCCCTATTGGGAATTTAGATACAAGGACAGAG CTAACAGCATCACCCTTTCAGACGTCTCCTACGCACTGGTCCTCCTTGCTCGACTTCTCGGGTATTTCTTTGGCC ATGACATCGCCCCAGTCGACGGACCTTACTCCTTCCCGTTGCCCATATCGCTCGGCCTGCACGGCCTAGGGTTTC TATTCCTGTTTTTTGCGTTTATTACCTTCAACTTCCCTTCAGATGCACCAGTCACTCCGAATTCGATGAACTACA CTAGTGCGGCGATCGGGTTGATTGCGTTGCTGAGCATTTTCACTTGGCTCATTACGGCCCGGAAGCAATTCAAGG GACCGGCTGATGTGCAGGACTTGGTTGTAGATGGAGTGGAGCAGGTAGGAGAGGCAGGAGAGGGGAGTGCCAGTT GTTCGGAGAAAGGCAAGCCAGATACTTGA |