Protein ID | Ani_SJS72_1|g6890.t1 |
Gene name | |
Location | scaffold_053:170191..171780 |
Strand | - |
Gene length (bp) | 1589 |
Transcript length (bp) | 1419 |
Coding sequence length (bp) | 1419 |
Protein length (aa) | 473 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF00892 | EamA | EamA-like transporter family | 2.8E-11 | 88 | 228 |
GO Term | Description | Terminal node |
---|---|---|
GO:0016020 | membrane | Yes |
GO:0016021 | integral component of membrane | Yes |
GO:0110165 | cellular anatomical entity | No |
GO:0005575 | cellular_component | No |
GO:0031224 | intrinsic component of membrane | No |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 54 | 0.45 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 83 | 105 | 22 |
2 | 120 | 142 | 22 |
3 | 155 | 177 | 22 |
4 | 187 | 209 | 22 |
5 | 216 | 233 | 17 |
6 | 253 | 275 | 22 |
7 | 287 | 309 | 22 |
8 | 324 | 346 | 22 |
9 | 399 | 421 | 22 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS72_1|g6890.t1 MSLNPSDARGVNSTAGEETQQYVTLLPAQNQVDEQHQQHVVYSEQTPLLRSGLGHESASASSAMHHYSSPPWWKT AQQVACDVWLQGKGMILVMFSQFFGASMNVMTQFLEIKGRDGKGFHPFQILFARMSITVLASYLYMWYARVPHPF GTRDTFTLLMLRAGGGFFGVYGLYYSVQYLPLSEATVVTFLAPILSCYACSLLIPNEFFTRKQQLAGLVSLAGVV LIARPFPFMRSGGDSEPEQGDKPGATDSYHHVLAIVVALFGVLGASCAYTTIRMIGQRCHPLVSVTYFSTFTTVV ATLAMLVVPSIPLELPGTVLEWTLLLGLGVSGFLLQFLLTAGLAYVPPVRKTKASVDWNRDYGTRDEEEEPSAKP TSSGSRATFMLYTQMLFAVFYDRAIWGSTLSAVSWMGSVLILVSAMYVAMAREGAKGTSSEEKEGGDQEGTDENR AGVAAEERLEEGGGRQVSGGRA* |
Coding | >Ani_SJS72_1|g6890.t1 ATGTCTCTGAATCCATCTGACGCAAGGGGCGTCAACTCGACCGCGGGTGAAGAAACTCAACAATATGTAACTTTA CTACCGGCTCAGAATCAAGTCGATGAGCAGCACCAACAGCACGTTGTCTATTCGGAGCAGACGCCGCTGCTTCGG TCGGGACTTGGTCATGAGTCTGCTTCTGCTTCTTCAGCAATGCATCACTATTCATCTCCGCCCTGGTGGAAGACG GCGCAGCAGGTAGCCTGCGATGTCTGGCTGCAGGGCAAGGGCATGATCCTGGTCATGTTCTCGCAATTCTTTGGC GCGTCGATGAATGTCATGACGCAGTTTTTGGAAATCAAAGGTCGTGATGGGAAGGGGTTTCATCCGTTTCAGATC CTGTTCGCCCGCATGTCTATCACGGTTCTCGCTAGTTACCTCTACATGTGGTATGCGCGTGTACCGCATCCGTTC GGAACGCGCGATACCTTCACTCTGCTGATGCTGCGCGCCGGAGGTGGATTCTTTGGCGTCTACGGGCTCTATTAC TCCGTGCAGTACCTGCCGCTCTCCGAGGCGACCGTGGTGACCTTTTTAGCGCCGATCCTGAGCTGCTATGCTTGC TCGCTTTTGATCCCCAACGAGTTCTTCACGCGCAAGCAGCAGCTCGCCGGACTGGTCTCGCTGGCGGGTGTCGTT CTCATCGCTCGGCCGTTCCCGTTCATGCGATCGGGCGGCGACTCCGAGCCGGAGCAGGGCGATAAGCCCGGTGCC ACCGATAGCTACCACCACGTGCTGGCCATCGTGGTGGCTCTGTTCGGAGTGCTGGGTGCCTCGTGTGCGTACACC ACGATCCGGATGATCGGACAGCGCTGCCACCCGCTCGTCTCGGTGACTTACTTCTCCACATTCACGACAGTCGTA GCTACGCTGGCGATGCTGGTCGTGCCATCGATTCCGCTGGAGCTGCCGGGCACAGTGCTGGAATGGACGCTGCTT CTGGGGTTAGGTGTCAGCGGATTCCTGCTGCAGTTCCTGCTCACAGCAGGTCTGGCATATGTACCGCCGGTGCGG AAGACCAAGGCGTCAGTAGACTGGAACCGGGACTATGGCACGCGCGACGAGGAAGAAGAGCCGTCCGCGAAGCCA ACATCGTCCGGATCACGGGCGACTTTCATGTTGTACACGCAGATGCTGTTTGCCGTGTTCTATGACCGGGCGATC TGGGGTAGTACGTTGTCGGCGGTGAGCTGGATGGGATCAGTGCTGATCCTGGTGAGCGCCATGTATGTGGCCATG GCGCGAGAGGGCGCAAAGGGAACCTCATCCGAGGAGAAGGAGGGCGGAGATCAAGAGGGCACGGACGAGAACCGG GCTGGAGTGGCTGCAGAAGAGCGTCTGGAGGAAGGCGGGGGAAGGCAAGTGAGCGGGGGTCGCGCATGA |
Transcript | >Ani_SJS72_1|g6890.t1 ATGTCTCTGAATCCATCTGACGCAAGGGGCGTCAACTCGACCGCGGGTGAAGAAACTCAACAATATGTAACTTTA CTACCGGCTCAGAATCAAGTCGATGAGCAGCACCAACAGCACGTTGTCTATTCGGAGCAGACGCCGCTGCTTCGG TCGGGACTTGGTCATGAGTCTGCTTCTGCTTCTTCAGCAATGCATCACTATTCATCTCCGCCCTGGTGGAAGACG GCGCAGCAGGTAGCCTGCGATGTCTGGCTGCAGGGCAAGGGCATGATCCTGGTCATGTTCTCGCAATTCTTTGGC GCGTCGATGAATGTCATGACGCAGTTTTTGGAAATCAAAGGTCGTGATGGGAAGGGGTTTCATCCGTTTCAGATC CTGTTCGCCCGCATGTCTATCACGGTTCTCGCTAGTTACCTCTACATGTGGTATGCGCGTGTACCGCATCCGTTC GGAACGCGCGATACCTTCACTCTGCTGATGCTGCGCGCCGGAGGTGGATTCTTTGGCGTCTACGGGCTCTATTAC TCCGTGCAGTACCTGCCGCTCTCCGAGGCGACCGTGGTGACCTTTTTAGCGCCGATCCTGAGCTGCTATGCTTGC TCGCTTTTGATCCCCAACGAGTTCTTCACGCGCAAGCAGCAGCTCGCCGGACTGGTCTCGCTGGCGGGTGTCGTT CTCATCGCTCGGCCGTTCCCGTTCATGCGATCGGGCGGCGACTCCGAGCCGGAGCAGGGCGATAAGCCCGGTGCC ACCGATAGCTACCACCACGTGCTGGCCATCGTGGTGGCTCTGTTCGGAGTGCTGGGTGCCTCGTGTGCGTACACC ACGATCCGGATGATCGGACAGCGCTGCCACCCGCTCGTCTCGGTGACTTACTTCTCCACATTCACGACAGTCGTA GCTACGCTGGCGATGCTGGTCGTGCCATCGATTCCGCTGGAGCTGCCGGGCACAGTGCTGGAATGGACGCTGCTT CTGGGGTTAGGTGTCAGCGGATTCCTGCTGCAGTTCCTGCTCACAGCAGGTCTGGCATATGTACCGCCGGTGCGG AAGACCAAGGCGTCAGTAGACTGGAACCGGGACTATGGCACGCGCGACGAGGAAGAAGAGCCGTCCGCGAAGCCA ACATCGTCCGGATCACGGGCGACTTTCATGTTGTACACGCAGATGCTGTTTGCCGTGTTCTATGACCGGGCGATC TGGGGTAGTACGTTGTCGGCGGTGAGCTGGATGGGATCAGTGCTGATCCTGGTGAGCGCCATGTATGTGGCCATG GCGCGAGAGGGCGCAAAGGGAACCTCATCCGAGGAGAAGGAGGGCGGAGATCAAGAGGGCACGGACGAGAACCGG GCTGGAGTGGCTGCAGAAGAGCGTCTGGAGGAAGGCGGGGGAAGGCAAGTGAGCGGGGGTCGCGCATGA |
Gene | >Ani_SJS72_1|g6890.t1 ATGTCTCTGAATCCATCTGACGCAAGGGGCGTCAACTCGACCGCGGGTGAAGAAACTCAACAATATGTAACTTTA CTACCGGCTCAGAATCAAGTCGATGAGCAGCACCAACAGCACGTTGTCTATTCGGAGCAGACGCCGCTGCTTCGG TCGGGACTTGGTCATGAGTCTGCTTCTGCTTCTTCAGCAATGCATCACTATTCATCTCCGCCCTGGTGGAAGACG GCGCAGCAGGTAGCCTGCGATGTCTGGCTGCAGGGCAAGGGCATGATCCTGGTCATGTTCTCGCAATTCTTTGGC GCGTCGATGAATGTCATGACGCAGTTTTTGGAAATCAAAGGTCGTGATGGGAAGGGGTTTCATCCGTTTCAGGTG CGTTCTATATCGCCTACCTATCTTTCTGCTGGAAAGCTCTGCTCTGCTCTGCTGCTAGTGGATGGATGATCTACT GTGCGCTGTGTAGGGGACGTCCACTCGTGGGGCACCCTCTAGTAGACACTAGATATCCCTGCTCAGGAACCCGGC TGATCCCGTAAGAACAGATCCTGTTCGCCCGCATGTCTATCACGGTTCTCGCTAGTTACCTCTACATGTGGTATG CGCGTGTACCGCATCCGTTCGGAACGCGCGATACCTTCACTCTGCTGATGCTGCGCGCCGGAGGTGGATTCTTTG GCGTCTACGGGCTCTATTACTCCGTGCAGTACCTGCCGCTCTCCGAGGCGACCGTGGTGACCTTTTTAGCGCCGA TCCTGAGCTGCTATGCTTGCTCGCTTTTGATCCCCAACGAGTTCTTCACGCGCAAGCAGCAGCTCGCCGGACTGG TCTCGCTGGCGGGTGTCGTTCTCATCGCTCGGCCGTTCCCGTTCATGCGATCGGGCGGCGACTCCGAGCCGGAGC AGGGCGATAAGCCCGGTGCCACCGATAGCTACCACCACGTGCTGGCCATCGTGGTGGCTCTGTTCGGAGTGCTGG GTGCCTCGTGTGCGTACACCACGATCCGGATGATCGGACAGCGCTGCCACCCGCTCGTCTCGGTGACTTACTTCT CCACATTCACGACAGTCGTAGCTACGCTGGCGATGCTGGTCGTGCCATCGATTCCGCTGGAGCTGCCGGGCACAG TGCTGGAATGGACGCTGCTTCTGGGGTTAGGTGTCAGCGGATTCCTGCTGCAGTTCCTGCTCACAGCAGGTCTGG CATATGTACCGCCGGTGCGGAAGACCAAGGCGTCAGTAGACTGGAACCGGGACTATGGCACGCGCGACGAGGAAG AAGAGCCGTCCGCGAAGCCAACATCGTCCGGATCACGGGCGACTTTCATGTTGTACACGCAGATGCTGTTTGCCG TGTTCTATGACCGGGCGATCTGGGGTAGTACGTTGTCGGCGGTGAGCTGGATGGGATCAGTGCTGATCCTGGTGA GCGCCATGTATGTGGCCATGGCGCGAGAGGGCGCAAAGGGAACCTCATCCGAGGAGAAGGAGGGCGGAGATCAAG AGGGCACGGACGAGAACCGGGCTGGAGTGGCTGCAGAAGAGCGTCTGGAGGAAGGCGGGGGAAGGCAAGTGAGCG GGGGTCGCGCATGA |