Fungal Genomics

at Utrecht University

General Properties

Protein ID	Ani_SJS72_1\|g689.t1
Gene name
Location	scaffold_003:361928..362714
Strand	-
Gene length (bp)	786
Transcript length (bp)	528
Coding sequence length (bp)	528
Protein length (aa)	176

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF01284	MARVEL	Membrane-associating domain	6.1E-31	7	145

GO

GO Term	Description	Terminal node
GO:0016020	membrane	Yes
GO:0110165	cellular anatomical entity	No
GO:0005575	cellular_component	No

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 35	0.5

Transmembrane Domains

Domain #	Start	End	Length
1	13	35	22
2	45	64	19
3	71	93	22
4	129	148	19

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Ani_SJS72_1\|g689.t1 MVAKAIQLGLRIWEFIWTLLIMALIGNMIAEAFAGNPATINYTMFVAAFSMFTLFYLVPASINIDWAIHPIFLIA IDTLNAILFLTAGIALAAKLECHSCSNDSYTLNNEITNGAHNRTKRCREAQASTAFLWFAWAGYTASMILSIIMS RQTSVNLRGRTGPARGVTRPSMAQV*
Coding	>Ani_SJS72_1\|g689.t1 ATGGTTGCCAAAGCTATCCAGCTCGGCCTACGGATCTGGGAGTTCATCTGGACTCTGCTCATCATGGCTTTGATC GGTAACATGATCGCCGAAGCGTTCGCCGGGAACCCGGCGACCATCAACTACACCATGTTTGTTGCAGCCTTCTCG ATGTTCACACTCTTCTATCTAGTCCCAGCGTCAATCAATATTGACTGGGCTATTCACCCAATCTTCTTGATCGCC ATCGACACGCTCAATGCGATCTTGTTCCTTACGGCTGGTATCGCTCTGGCTGCGAAATTGGAATGTCACAGCTGC AGCAACGATTCCTACACGCTGAACAACGAAATCACCAATGGAGCCCATAACCGCACGAAGCGTTGCCGCGAGGCT CAGGCCTCGACGGCATTCCTGTGGTTTGCCTGGGCTGGCTACACTGCCTCGATGATTCTGTCGATCATCATGTCA CGCCAGACAAGTGTCAACCTTCGTGGACGCACCGGTCCTGCCCGCGGCGTTACTCGCCCCAGCATGGCCCAAGTT TAA
Transcript	>Ani_SJS72_1\|g689.t1 ATGGTTGCCAAAGCTATCCAGCTCGGCCTACGGATCTGGGAGTTCATCTGGACTCTGCTCATCATGGCTTTGATC GGTAACATGATCGCCGAAGCGTTCGCCGGGAACCCGGCGACCATCAACTACACCATGTTTGTTGCAGCCTTCTCG ATGTTCACACTCTTCTATCTAGTCCCAGCGTCAATCAATATTGACTGGGCTATTCACCCAATCTTCTTGATCGCC ATCGACACGCTCAATGCGATCTTGTTCCTTACGGCTGGTATCGCTCTGGCTGCGAAATTGGAATGTCACAGCTGC AGCAACGATTCCTACACGCTGAACAACGAAATCACCAATGGAGCCCATAACCGCACGAAGCGTTGCCGCGAGGCT CAGGCCTCGACGGCATTCCTGTGGTTTGCCTGGGCTGGCTACACTGCCTCGATGATTCTGTCGATCATCATGTCA CGCCAGACAAGTGTCAACCTTCGTGGACGCACCGGTCCTGCCCGCGGCGTTACTCGCCCCAGCATGGCCCAAGTT TAA
Gene	>Ani_SJS72_1\|g689.t1 ATGGTTGCCAAAGCTATCCAGCTCGGCCTACGGATCTGGGAGGTATGTCACTCTGTCTCGAGCCGAGAGCCTTGC TCTGGCTGGGCCTGCAAAGCAAGCAAGTGAAGCAGCTGGGAATTCTGGACTAACGCTGAAGATGGCATCAGTTCA TCTGGACTCTGCTCATCATGGCTTTGATCGGTAACATGATCGCCGAAGCGTTCGCCGGGAACCCGGCGACCATCA ACTACACCATGTTTGTTGCAGCCTTCTCGATGTTCACACTCTTCTATCTAGTCCCAGCGTCAATCAATATTGACT GGGCTATTCACCCAATCTTCTTGATCGCCATCGACACGCTCAATGCGATCTTGTTCCTTACGGCTGGTATCGCTC TGGCTGCGAAATTGGAATGTCACAGCTGCAGCAACGATGTACGTATAGTGCATGATTTTCTGCCTTATCAGTCGG GGAAGCTATCCACTAAAAAAAGTGGAGAGTGGAGTTTTCGTCCCGCGAACTCCAAAAAGATGATGCACCACCGTA AAATAATGTTAGGGCAACGCTGACTTGTGGATACTTACCTAGTCCTACACGCTGAACAACGAAATCACCAATGGA GCCCATAACCGCACGAAGCGTTGCCGCGAGGCTCAGGCCTCGACGGCATTCCTGTGGTTTGCCTGGGCTGGCTAC ACTGCCTCGATGATTCTGTCGATCATCATGTCACGCCAGACAAGTGTCAACCTTCGTGGACGCACCGGTCCTGCC CGCGGCGTTACTCGCCCCAGCATGGCCCAAGTTTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail