© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS72_1|g6872.t1 |
| Gene name | |
| Location | scaffold_053:130983..132974 |
| Strand | - |
| Gene length (bp) | 1991 |
| Transcript length (bp) | 1746 |
| Coding sequence length (bp) | 1746 |
| Protein length (aa) | 582 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF01694 | Rhomboid | Rhomboid family | 3.6E-27 | 405 | 559 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0016021 | integral component of membrane | Yes |
| GO:0004252 | serine-type endopeptidase activity | Yes |
| GO:0110165 | cellular anatomical entity | No |
| GO:0003824 | catalytic activity | No |
| GO:0140096 | catalytic activity, acting on a protein | No |
| GO:0005575 | cellular_component | No |
| GO:0004175 | endopeptidase activity | No |
| GO:0031224 | intrinsic component of membrane | No |
| GO:0008233 | peptidase activity | No |
| GO:0017171 | serine hydrolase activity | No |
| GO:0003674 | molecular_function | No |
| GO:0008236 | serine-type peptidase activity | No |
| GO:0016787 | hydrolase activity | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 19 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 329 | 348 | 19 |
| 2 | 363 | 385 | 22 |
| 3 | 446 | 468 | 22 |
| 4 | 510 | 532 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS72_1|g6872.t1 MNNALGVAWRIPCAGLRASSWLAPSTSTSPLRSSAPLRLSTSTATLPWQPDSIARRLLSSWSSQSSPLSRQPTTP SSSLIPIRSLHSTHPLRANHPTSPDQSQEQGAHPRSTPFTTTELKTIFGPRTKLPPALANRVLAVLHGRRLLGTL DLNLPADIVRSVHPRSLELALKYLRANYPVDEDAAILARVEREMDEEEARNVQRYMPQGGEYGADVNGGASASHN PSGKSVLEEVRTQNEAYLLAEQERKRQEWLSRGMQHDERVRRSLEKNSLALRDVDEKTALEIAPKDRQLADPKQR PVLAWVQKNYMAAEDLDFDLNKLTLRQRLLPSLAFVLLTLGLCYAYTMYYEPPATSDRLWPNIPRSAATVGTIIG INTAIFALWWFPPCWRLFNRYLISIPANPNPPVRLLGNIFSHQYPKHLISNMLFLWFIGTKLHDEIGRGEFLSLY IASGVVGSFVTLTAHCLMAQWTVSALGASGALSGVVAAYCTLNANENLQFFFLPEEWKKMLSVPGWTIITTMVAL ESISLVRRLRGPHKLDHWAHMGGYLTGISWALCRPKTERKHPESGTTWYRWLSSKN* |
| Coding | >Ani_SJS72_1|g6872.t1 ATGAACAATGCGTTGGGCGTAGCCTGGCGCATACCATGCGCGGGGCTCCGTGCCTCGAGCTGGCTTGCCCCATCA ACATCAACATCACCTCTCCGCTCCTCCGCTCCTCTTCGTCTCTCCACCTCTACAGCCACCCTCCCATGGCAACCC GATAGCATCGCCAGGCGCCTTTTAAGCTCCTGGTCAAGCCAATCCTCACCCCTCTCTAGACAACCAACCACTCCC TCCTCATCCCTCATTCCCATCCGCTCCCTCCACAGTACCCACCCTCTCCGCGCCAACCACCCAACATCTCCAGAC CAATCCCAAGAACAAGGCGCCCATCCCCGCTCAACACCCTTCACGACCACCGAACTCAAGACTATCTTCGGCCCA CGTACGAAACTTCCCCCAGCCCTTGCGAACCGCGTCCTCGCCGTCCTCCACGGCCGCCGTCTCCTCGGCACCCTG GACCTAAACCTCCCCGCTGATATCGTCCGCTCCGTGCACCCGCGCAGTCTCGAGCTAGCACTCAAGTACCTCCGC GCGAACTACCCGGTTGACGAAGATGCCGCGATCCTGGCCCGCGTGGAGCGCGAAATGGACGAGGAGGAAGCAAGA AATGTACAGCGGTACATGCCGCAGGGTGGTGAGTATGGCGCCGATGTGAATGGGGGCGCAAGTGCGTCGCATAAT CCGTCGGGAAAGAGTGTGTTGGAGGAAGTCCGGACGCAGAATGAAGCGTACTTGCTGGCCGAGCAGGAGAGGAAA CGACAGGAGTGGTTGTCCCGCGGCATGCAGCATGATGAGAGGGTTAGGCGCTCATTGGAGAAGAATAGTCTTGCT CTGCGGGATGTGGATGAGAAGACTGCGCTGGAGATTGCGCCGAAAGACCGACAACTTGCGGACCCTAAGCAGCGT CCTGTTCTCGCTTGGGTGCAGAAGAATTACATGGCTGCGGAGGACTTGGACTTTGATCTAAACAAGCTCACCCTG CGTCAACGGCTTCTCCCCTCACTTGCGTTCGTGCTCCTAACCCTGGGTCTCTGCTACGCCTACACAATGTATTAC GAACCGCCCGCAACCTCCGACAGACTATGGCCCAATATTCCTCGCTCAGCTGCAACGGTCGGCACCATCATCGGT ATCAATACTGCTATCTTCGCGCTCTGGTGGTTCCCTCCGTGCTGGAGACTCTTCAACCGTTACTTGATCAGCATC CCTGCCAACCCTAATCCTCCCGTGAGACTCCTCGGCAACATCTTCAGCCATCAGTACCCTAAACATCTGATCTCG AATATGCTGTTTCTATGGTTCATTGGAACCAAGTTGCACGATGAAATCGGCCGCGGAGAGTTCCTATCTCTCTAC ATCGCCTCTGGAGTTGTCGGCTCGTTCGTCACCCTCACGGCTCACTGTCTCATGGCTCAATGGACTGTGAGCGCG CTCGGTGCCAGTGGTGCCCTCTCTGGCGTTGTGGCAGCTTACTGCACGTTGAATGCCAACGAAAACTTGCAATTC TTTTTCCTCCCCGAAGAATGGAAGAAGATGCTTTCCGTCCCTGGATGGACCATCATTACCACCATGGTTGCTCTG GAGTCAATCTCATTGGTCCGCCGACTACGTGGTCCTCATAAGCTCGATCACTGGGCCCATATGGGTGGCTACTTG ACGGGTATTTCCTGGGCTTTGTGTCGGCCAAAGACGGAGCGGAAACATCCTGAGAGTGGGACTACTTGGTATCGC TGGCTGTCTTCGAAGAATTAG |
| Transcript | >Ani_SJS72_1|g6872.t1 ATGAACAATGCGTTGGGCGTAGCCTGGCGCATACCATGCGCGGGGCTCCGTGCCTCGAGCTGGCTTGCCCCATCA ACATCAACATCACCTCTCCGCTCCTCCGCTCCTCTTCGTCTCTCCACCTCTACAGCCACCCTCCCATGGCAACCC GATAGCATCGCCAGGCGCCTTTTAAGCTCCTGGTCAAGCCAATCCTCACCCCTCTCTAGACAACCAACCACTCCC TCCTCATCCCTCATTCCCATCCGCTCCCTCCACAGTACCCACCCTCTCCGCGCCAACCACCCAACATCTCCAGAC CAATCCCAAGAACAAGGCGCCCATCCCCGCTCAACACCCTTCACGACCACCGAACTCAAGACTATCTTCGGCCCA CGTACGAAACTTCCCCCAGCCCTTGCGAACCGCGTCCTCGCCGTCCTCCACGGCCGCCGTCTCCTCGGCACCCTG GACCTAAACCTCCCCGCTGATATCGTCCGCTCCGTGCACCCGCGCAGTCTCGAGCTAGCACTCAAGTACCTCCGC GCGAACTACCCGGTTGACGAAGATGCCGCGATCCTGGCCCGCGTGGAGCGCGAAATGGACGAGGAGGAAGCAAGA AATGTACAGCGGTACATGCCGCAGGGTGGTGAGTATGGCGCCGATGTGAATGGGGGCGCAAGTGCGTCGCATAAT CCGTCGGGAAAGAGTGTGTTGGAGGAAGTCCGGACGCAGAATGAAGCGTACTTGCTGGCCGAGCAGGAGAGGAAA CGACAGGAGTGGTTGTCCCGCGGCATGCAGCATGATGAGAGGGTTAGGCGCTCATTGGAGAAGAATAGTCTTGCT CTGCGGGATGTGGATGAGAAGACTGCGCTGGAGATTGCGCCGAAAGACCGACAACTTGCGGACCCTAAGCAGCGT CCTGTTCTCGCTTGGGTGCAGAAGAATTACATGGCTGCGGAGGACTTGGACTTTGATCTAAACAAGCTCACCCTG CGTCAACGGCTTCTCCCCTCACTTGCGTTCGTGCTCCTAACCCTGGGTCTCTGCTACGCCTACACAATGTATTAC GAACCGCCCGCAACCTCCGACAGACTATGGCCCAATATTCCTCGCTCAGCTGCAACGGTCGGCACCATCATCGGT ATCAATACTGCTATCTTCGCGCTCTGGTGGTTCCCTCCGTGCTGGAGACTCTTCAACCGTTACTTGATCAGCATC CCTGCCAACCCTAATCCTCCCGTGAGACTCCTCGGCAACATCTTCAGCCATCAGTACCCTAAACATCTGATCTCG AATATGCTGTTTCTATGGTTCATTGGAACCAAGTTGCACGATGAAATCGGCCGCGGAGAGTTCCTATCTCTCTAC ATCGCCTCTGGAGTTGTCGGCTCGTTCGTCACCCTCACGGCTCACTGTCTCATGGCTCAATGGACTGTGAGCGCG CTCGGTGCCAGTGGTGCCCTCTCTGGCGTTGTGGCAGCTTACTGCACGTTGAATGCCAACGAAAACTTGCAATTC TTTTTCCTCCCCGAAGAATGGAAGAAGATGCTTTCCGTCCCTGGATGGACCATCATTACCACCATGGTTGCTCTG GAGTCAATCTCATTGGTCCGCCGACTACGTGGTCCTCATAAGCTCGATCACTGGGCCCATATGGGTGGCTACTTG ACGGGTATTTCCTGGGCTTTGTGTCGGCCAAAGACGGAGCGGAAACATCCTGAGAGTGGGACTACTTGGTATCGC TGGCTGTCTTCGAAGAATTAG |
| Gene | >Ani_SJS72_1|g6872.t1 ATGAACAATGCGTTGGGCGTAGCCTGGCGCATACCATGCGCGGGGCTCCGTGCCTCGAGCTGGCTTGCCCCATCA ACATCAACATCACCTCTCCGCTCCTCCGCTCCTCTTCGTCTCTCCACCTCTACAGCCACCCTCCCATGGCAACCC GATAGCATCGCCAGGCGCCTTTTAAGCTCCTGGTCAAGCCAATCCTCACCCCTCTCTAGACAACCAACCACTCCC TCCTCATCCCTCATTCCCATCCGCTCCCTCCACAGTACCCACCCTCTCCGCGCCAACCACCCAACATCTCCAGAC CAATCCCAAGAACAAGGCGCCCATCCCCGCTCAACACCCTTCACGACCACCGAACTCAAGACTATCTTCGGCCCA CGTACGAAACTTCCCCCAGCCCTTGCGAACCGCGTCCTCGCCGTCCTCCACGGCCGCCGTCTCCTCGGCACCCTG GACCTAAACCTCCCCGCTGATATCGTCCGCTCCGTGCACCCGCGCAGTCTCGAGCTAGCACTCAAGTACCTCCGC GCGAACTACCCGGTTGACGAAGATGCCGCGATCCTGGCCCGCGTGGAGCGCGAAATGGACGAGGAGGAAGCAAGA AATGTACAGCGGTACATGCCGCAGGGTGGTGAGTATGGCGCCGATGTGAATGGGGGCGCAAGTGCGTCGCATAAT CCGTCGGGAAAGAGTGTGTTGGAGGAAGTCCGGACGCAGAATGAAGCGTACTTGCTGGCCGAGCAGGAGAGGAAA CGACAGGAGTGGTTGTCCCGCGGCATGCAGCATGATGAGAGGGTTAGGCGCTCATTGGAGAAGAATAGTCTTGCT CTGCGGGATGTGGATGAGAAGACTGCGCTGGAGATTGCGCCGAAAGGTACGCTTTAATGGTGGATTTGGTTTATT GTTGGTGACTGACGATCTCTTTTGCGTGCAGACCGACAACTTGCGGACCCTAAGCAGCGTCCTGTTCTCGCTTGG GTGCAGAAGAATTACATGGCTGCGGAGGACTTGGACTTTGATCTAAACAAGCTCACCCTGGTAGGTTCTTTCATT ATCATCTTGCATGTTATTTCCTTGTCTAATCTATAAACAGCGTCAACGGCTTCTCCCCTCACTTGCGTTCGTGCT CCTAACCCTGGGTCTCTGCTACGCCTACACAATGTATTACGAACCGCCCGCAACCTCCGACAGACTATGGCCCAA TATTCCTCGCTCAGCTGCAACGGTCGGCACCATCATCGGTATCAATACTGCTATCTTCGCGCTCTGGTGGTTCCC TCCGTGCTGGAGACTCTTCAACCGTTACTTGATCAGCATCCCTGCCAACCCTAATCCTCCCGTGAGACTCCTCGG CAACATCTTCAGCCATCAGTACCCTAAACATCTGATCTCGAATATGCTGTTTCTATGGTTCATTGGAACCAAGTG TGAGTTTCTCTCTCATATCCTTGCTTTAATATTCGCAAACCCAAAACTGACCTGTGTGTGACTGCTCACAGTGCA CGATGAAATCGGCCGCGGAGAGTTCCTATCTCTCTACATCGCCTCTGGAGTTGTCGGCTCGTTCGTCACCCTCAC GGCTCACTGTCTCATGGCTCAATGGACTGTGAGCGCGCTCGGTGCCAGTGGTGCCCTCTCTGGCGTTGTGGCAGC TTACTGCACGTTGAATGCCAAGTACGTACCCCATCCTTTCCTCCTCTCATCTTCAATCTCAACTAATAACACCCT ACAGCGAAAACTTGCAATTCTTTTTCCTCCCCGAAGAATGGAAGAAGATGCTTTCCGTCCCTGGATGGACCATCA TTACCACCATGGTTGCTCTGGAGTCAATCTCATTGGTCCGCCGACTACGTGGTCCTCATAAGCTCGATCACTGGG CCCATATGGGTGGCTACTTGACGGGTATTTCCTGGGCTTTGTGTCGGCCAAAGACGGAGCGGAAACATCCTGAGA GTGGGACTACTTGGTATCGCTGGCTGTCTTCGAAGAATTAG |