© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS72_1|g686.t1 |
| Gene name | |
| Location | scaffold_003:352469..354085 |
| Strand | + |
| Gene length (bp) | 1616 |
| Transcript length (bp) | 1098 |
| Coding sequence length (bp) | 1098 |
| Protein length (aa) | 366 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF19086 | Terpene_syn_C_2 | Terpene synthase family 2, C-terminal metal binding | 5.2E-46 | 97 | 294 |
| PF03936 | Terpene_synth_C | Terpene synthase family, metal binding domain | 2.7E-06 | 165 | 292 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0000287 | magnesium ion binding | Yes |
| GO:0010333 | terpene synthase activity | Yes |
| GO:0016829 | lyase activity | Yes |
| GO:0003824 | catalytic activity | No |
| GO:0016835 | carbon-oxygen lyase activity | No |
| GO:0016838 | carbon-oxygen lyase activity, acting on phosphates | No |
| GO:0003674 | molecular_function | No |
| GO:0043169 | cation binding | No |
| GO:0043167 | ion binding | No |
| GO:0005488 | binding | No |
| GO:0046872 | metal ion binding | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 39 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS72_1|g686.t1 MAVTRVQQSISSPTVKIPRQDTSLTIRLPEMFVLFLSGEPIVNRHYKSVKELSEAWISRECYFDERGRRRLQKTD FAYFCSIAAPDAEPEELRTVIDWGNWVFPFDDLFDNGSLKDDPERAQILVEDLRAGMADEAGQRPVLSDYPIVQV HNSVWHRITQAQPIGIRRRFARAMNDYCTGCLAQVRSCSKGELPSLEEMLCLRRQSAGVSPLFALVEYAHKLDIP DHVFECKSIQEIERIGTDLVLLQNDLLSYCKEEKEGVSHNLVAICRHNGMPAQVAFNHVGEMLIERYRDWYLALA ALPTWGERVDADVQEYIRGVQNVVRANLHWSFRSGRYFGKANDQVRKTGMVTVRGNNADFKLSMA* |
| Coding | >Ani_SJS72_1|g686.t1 ATGGCCGTCACAAGAGTCCAGCAGAGTATATCTTCGCCAACAGTCAAGATACCCCGGCAAGATACTTCTCTCACC ATCCGCCTCCCTGAAATGTTCGTGTTGTTCTTGTCGGGCGAACCTATAGTAAATCGGCACTATAAGTCTGTGAAA GAGCTGTCAGAAGCATGGATCTCTAGGGAATGCTACTTTGATGAAAGAGGCCGAAGGCGACTACAAAAGACGGAC TTCGCTTATTTCTGTTCCATCGCAGCTCCAGATGCTGAGCCCGAAGAGTTGCGGACAGTTATTGACTGGGGAAAC TGGGTGTTCCCTTTTGATGACCTCTTCGATAATGGAAGCCTCAAGGACGACCCAGAACGTGCCCAAATACTTGTT GAGGATTTGCGAGCAGGCATGGCCGACGAAGCTGGGCAGAGGCCAGTACTCTCAGATTACCCAATAGTACAGGTG CACAACTCAGTATGGCACCGAATCACTCAGGCTCAACCTATCGGGATTCGTCGCAGGTTTGCACGTGCCATGAAT GACTACTGCACCGGATGCTTGGCTCAAGTACGCTCATGCTCCAAGGGAGAGTTGCCCTCGCTTGAAGAAATGCTC TGTCTGCGTAGGCAGTCTGCAGGTGTTTCGCCGCTCTTTGCCTTAGTAGAATATGCCCACAAACTAGATATCCCA GATCATGTGTTTGAATGCAAGAGCATCCAAGAGATCGAGAGGATTGGTACTGACCTCGTGTTACTGCAAAACGAC CTACTATCATACTGCAAAGAAGAGAAAGAAGGTGTGAGCCATAACTTAGTGGCCATCTGCCGTCACAATGGCATG CCAGCGCAGGTAGCGTTTAATCATGTCGGCGAAATGCTCATTGAGCGCTACCGAGACTGGTACCTTGCTTTGGCA GCACTGCCAACCTGGGGGGAACGGGTCGATGCAGATGTTCAAGAATACATCCGAGGCGTGCAGAATGTCGTTCGC GCTAATCTTCACTGGAGCTTCCGGTCCGGGCGATACTTTGGGAAAGCAAACGACCAAGTGCGGAAGACCGGAATG GTGACTGTGCGGGGCAACAACGCCGACTTCAAGCTGTCTATGGCGTAG |
| Transcript | >Ani_SJS72_1|g686.t1 ATGGCCGTCACAAGAGTCCAGCAGAGTATATCTTCGCCAACAGTCAAGATACCCCGGCAAGATACTTCTCTCACC ATCCGCCTCCCTGAAATGTTCGTGTTGTTCTTGTCGGGCGAACCTATAGTAAATCGGCACTATAAGTCTGTGAAA GAGCTGTCAGAAGCATGGATCTCTAGGGAATGCTACTTTGATGAAAGAGGCCGAAGGCGACTACAAAAGACGGAC TTCGCTTATTTCTGTTCCATCGCAGCTCCAGATGCTGAGCCCGAAGAGTTGCGGACAGTTATTGACTGGGGAAAC TGGGTGTTCCCTTTTGATGACCTCTTCGATAATGGAAGCCTCAAGGACGACCCAGAACGTGCCCAAATACTTGTT GAGGATTTGCGAGCAGGCATGGCCGACGAAGCTGGGCAGAGGCCAGTACTCTCAGATTACCCAATAGTACAGGTG CACAACTCAGTATGGCACCGAATCACTCAGGCTCAACCTATCGGGATTCGTCGCAGGTTTGCACGTGCCATGAAT GACTACTGCACCGGATGCTTGGCTCAAGTACGCTCATGCTCCAAGGGAGAGTTGCCCTCGCTTGAAGAAATGCTC TGTCTGCGTAGGCAGTCTGCAGGTGTTTCGCCGCTCTTTGCCTTAGTAGAATATGCCCACAAACTAGATATCCCA GATCATGTGTTTGAATGCAAGAGCATCCAAGAGATCGAGAGGATTGGTACTGACCTCGTGTTACTGCAAAACGAC CTACTATCATACTGCAAAGAAGAGAAAGAAGGTGTGAGCCATAACTTAGTGGCCATCTGCCGTCACAATGGCATG CCAGCGCAGGTAGCGTTTAATCATGTCGGCGAAATGCTCATTGAGCGCTACCGAGACTGGTACCTTGCTTTGGCA GCACTGCCAACCTGGGGGGAACGGGTCGATGCAGATGTTCAAGAATACATCCGAGGCGTGCAGAATGTCGTTCGC GCTAATCTTCACTGGAGCTTCCGGTCCGGGCGATACTTTGGGAAAGCAAACGACCAAGTGCGGAAGACCGGAATG GTGACTGTGCGGGGCAACAACGCCGACTTCAAGCTGTCTATGGCGTAG |
| Gene | >Ani_SJS72_1|g686.t1 ATGGCCGTCACAAGAGTCCAGCAGAGTATATCTTCGCCAACAGTCAAGATACCCCGGCAAGATACTTCTCTCACC ATCCGCCTCCCTGAAATGTTCGTGTTGTTCTTGTCGGGCGAACCTATAGTAAATCGGCACTATAAGTCTGTGAAA GAGCTGTCAGAAGCATGGATCTCTAGGTGCATATCGCCCCCTAATGTGGGCATCACCTTTCTCTAACCTAGCCAC CGCCATGACAGGGAATGCTACTTTGATGAAAGAGGCCGAAGGCGACTACAAAAGACGGACTTCGCTTATTTCTGT TCCATCGCAGCTCCAGATGCTGAGCCCGAAGAGTTGCGGACAGTTATTGACTGGGGAAACTGGGTGCGTTTCATA ACCACGACCGACCGCATAAAGTTCCACTGACTAGATCTAACCATTATTTCCCAAGCAGGTGTTCCCTTTTGATGA CCGTAAGCACCATCTCTCTTGGAAGGCTTCTGTGTGATGACTGAGCTTCGATTCTAGTCTTCGATAATGGAAGCC TCAAGGACGACCCAGAACGTGCCCAAATACTTGTTGAGGATTTGCGAGCAGGCATGGCCGACGAAGCTGGGCAGA GGCCAGTACTCTCAGATTACCCAATAGTACAGGTGCACAACTCAGTATGGCACCGAATCACTCAGGTACGTTGAT CATTATACTGTACTGGGAGTGCATATTGACGTCTGACGGTATTGCAGGCTCAACCTATCGGTATGTAGCGCTGGG ATTCCTCTACACACTTTAGGGTATCTGCTAACGTCGTTTAAGGGATTCGTCGCAGGTTTGCACGTGCCATGAATG ACTACTGCACCGGATGCTTGGCTCAAGTACGCTCATGCTCCAAGGGAGAGTTGCCCTCGCTTGAAGAAATGCTCT GTCTGCGTAGGCAGTCTGCAGGTGTTTCGCCGCTCTTTGCCTTAGTAGAGTATGTTATGACGTCTGCTTGCCTGT GAATGACACTAACTTGAGGGATATTGCAGATATGCCCACAAACTAGATATCCCAGATCATGTGTTTGAATGCAAG AGCATCCAAGAGATCGAGAGGATTGGTACTGACCTCGTGTTACTGTAGGCTGCCCCAACACATCACCCAACATCT GAATTCACTAACGTATCCTAGGCAAAACGACCTACTATCATACTGCAAAGAAGAGGTTAGTTGTCTACATTGAAA TACCAGCTCTGACCCGCATGACTTACAAAAGAATACAGAAAGAAGGTGTGAGCCATAACTTAGTGGCCATCTGCC GTCACAATGGCATGCCAGCGCAGGTAGCGTTTAATCATGTCGGCGAAATGCTCATTGAGCGCTACCGAGACTGGT ACCTTGCTTTGGCAGCACTGCCAACCTGGGGGGAACGGGTCGATGCAGATGTTCAAGAATACATCCGAGGCGTGC AGAATGTCGTTCGCGCTAATCTTCACTGGAGGTAGGTGTTGACTAGCGATCTTTGTTACCCAAAATACTCACGAT GATGCCATAGCTTCCGGTCCGGGCGATACTTTGGGAAAGCAAACGACCAAGTGCGGAAGACCGGAATGGTGACTG TGCGGGGCAACAACGCCGACTTCAAGCTGTCTATGGCGTAG |