© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS72_1|g6854.t1 |
| Gene name | |
| Location | scaffold_053:78892..80285 |
| Strand | - |
| Gene length (bp) | 1393 |
| Transcript length (bp) | 1326 |
| Coding sequence length (bp) | 1326 |
| Protein length (aa) | 442 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF08426 | ICE2 | ICE2 | 5.6E-153 | 5 | 423 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| Yes | 1 - 19 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 2 | 24 | 22 |
| 2 | 34 | 51 | 17 |
| 3 | 58 | 80 | 22 |
| 4 | 143 | 165 | 22 |
| 5 | 172 | 194 | 22 |
| 6 | 204 | 226 | 22 |
| 7 | 233 | 250 | 17 |
| 8 | 273 | 295 | 22 |
| 9 | 302 | 324 | 22 |
| 10 | 355 | 377 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS72_1|g6854.t1 MWLFRALSSAVFLAVTVSSIPLAFDVGGKTCGLAYSLSLATFYFLFSLLRLTTPDRSWLRSSLIVVISSTQWLII PILLIWSLNRFSIDTDNAGSWVERTFTGKRAHDSSIQEWLFGPDGLVESVTIGNWDKLLRWSTPVFQLVEGFCSL LVIQAAGQITRWLVNRGGRSDSWMIGLLVLSASIISSSVYFLWRVLQFPEISNVDAALIGVSITCAVILCAWGIG SGRGNPVESSLLFAYIVLCIYQIFTDYQPSHPVEQVPSPAQAGDFPPLPPIIMASYTTLMHALSTLPSIIHAAFN VITAVFGAVTPSVLISLTYRILVLYASTRIIPAVREAGARALSQEASLDDSDAAGQFLGVLSYFSPSILIAVYTS LLMQHFASTSQAMGGSGEWWSTQGAGGGNLWRWANLAGTMALYAVELYLGENDDLDSGLAGHWKTD* |
| Coding | >Ani_SJS72_1|g6854.t1 ATGTGGCTCTTCCGCGCCCTTTCGTCGGCCGTCTTTCTGGCCGTCACCGTCTCTTCCATTCCCCTCGCCTTTGAT GTGGGTGGGAAAACATGCGGTCTGGCCTATTCCTTGTCCCTGGCCACCTTCTACTTCCTATTTTCGCTTCTGCGC CTCACTACGCCTGATCGGTCATGGCTCCGCTCCTCCCTGATCGTCGTCATTAGCTCGACGCAATGGCTCATTATT CCGATTCTGCTTATCTGGTCGCTGAACCGCTTCTCGATCGATACCGATAATGCTGGCTCTTGGGTGGAGCGGACC TTCACGGGCAAGAGAGCCCACGACTCATCGATCCAGGAGTGGCTGTTTGGGCCCGATGGGCTGGTAGAATCAGTG ACTATCGGGAACTGGGATAAACTGCTGAGATGGTCGACCCCAGTTTTCCAGCTGGTTGAAGGATTCTGCAGCTTA TTGGTCATACAGGCTGCAGGGCAGATTACCCGCTGGCTTGTCAACCGTGGTGGGCGAAGCGATAGTTGGATGATC GGTCTCCTGGTACTCTCCGCCTCCATCATATCGAGCTCGGTATACTTCCTGTGGCGAGTCCTCCAATTTCCCGAG ATCTCAAATGTTGATGCCGCTTTAATCGGGGTATCCATCACCTGTGCTGTGATCCTTTGCGCGTGGGGTATTGGT AGTGGGCGAGGAAACCCAGTAGAAAGCTCTCTACTGTTCGCATACATCGTTCTTTGCATCTACCAGATCTTCACT GATTACCAGCCGTCACATCCTGTGGAGCAAGTCCCTTCTCCCGCTCAAGCCGGGGATTTCCCACCGCTTCCTCCT ATTATCATGGCTTCCTACACGACCCTGATGCACGCCTTGTCCACCTTGCCCTCCATCATCCACGCCGCCTTCAAC GTCATCACCGCGGTATTCGGTGCCGTCACCCCCTCCGTATTGATCTCGCTCACATACCGGATCCTTGTTCTGTAC GCATCGACTCGCATCATACCCGCTGTCCGCGAAGCGGGTGCACGAGCTCTCTCCCAAGAAGCATCGTTGGATGAC TCCGATGCGGCGGGCCAGTTCTTGGGCGTACTCAGCTACTTCTCTCCGTCGATCCTGATCGCTGTATACACCAGT CTCTTGATGCAGCACTTCGCCTCTACCTCTCAAGCAATGGGTGGCAGTGGCGAGTGGTGGAGCACTCAGGGAGCT GGCGGTGGAAACCTTTGGCGGTGGGCCAACCTCGCTGGCACCATGGCCCTGTACGCTGTTGAGTTATACCTCGGT GAGAACGACGACCTGGACTCCGGACTCGCTGGCCACTGGAAGACCGACTGA |
| Transcript | >Ani_SJS72_1|g6854.t1 ATGTGGCTCTTCCGCGCCCTTTCGTCGGCCGTCTTTCTGGCCGTCACCGTCTCTTCCATTCCCCTCGCCTTTGAT GTGGGTGGGAAAACATGCGGTCTGGCCTATTCCTTGTCCCTGGCCACCTTCTACTTCCTATTTTCGCTTCTGCGC CTCACTACGCCTGATCGGTCATGGCTCCGCTCCTCCCTGATCGTCGTCATTAGCTCGACGCAATGGCTCATTATT CCGATTCTGCTTATCTGGTCGCTGAACCGCTTCTCGATCGATACCGATAATGCTGGCTCTTGGGTGGAGCGGACC TTCACGGGCAAGAGAGCCCACGACTCATCGATCCAGGAGTGGCTGTTTGGGCCCGATGGGCTGGTAGAATCAGTG ACTATCGGGAACTGGGATAAACTGCTGAGATGGTCGACCCCAGTTTTCCAGCTGGTTGAAGGATTCTGCAGCTTA TTGGTCATACAGGCTGCAGGGCAGATTACCCGCTGGCTTGTCAACCGTGGTGGGCGAAGCGATAGTTGGATGATC GGTCTCCTGGTACTCTCCGCCTCCATCATATCGAGCTCGGTATACTTCCTGTGGCGAGTCCTCCAATTTCCCGAG ATCTCAAATGTTGATGCCGCTTTAATCGGGGTATCCATCACCTGTGCTGTGATCCTTTGCGCGTGGGGTATTGGT AGTGGGCGAGGAAACCCAGTAGAAAGCTCTCTACTGTTCGCATACATCGTTCTTTGCATCTACCAGATCTTCACT GATTACCAGCCGTCACATCCTGTGGAGCAAGTCCCTTCTCCCGCTCAAGCCGGGGATTTCCCACCGCTTCCTCCT ATTATCATGGCTTCCTACACGACCCTGATGCACGCCTTGTCCACCTTGCCCTCCATCATCCACGCCGCCTTCAAC GTCATCACCGCGGTATTCGGTGCCGTCACCCCCTCCGTATTGATCTCGCTCACATACCGGATCCTTGTTCTGTAC GCATCGACTCGCATCATACCCGCTGTCCGCGAAGCGGGTGCACGAGCTCTCTCCCAAGAAGCATCGTTGGATGAC TCCGATGCGGCGGGCCAGTTCTTGGGCGTACTCAGCTACTTCTCTCCGTCGATCCTGATCGCTGTATACACCAGT CTCTTGATGCAGCACTTCGCCTCTACCTCTCAAGCAATGGGTGGCAGTGGCGAGTGGTGGAGCACTCAGGGAGCT GGCGGTGGAAACCTTTGGCGGTGGGCCAACCTCGCTGGCACCATGGCCCTGTACGCTGTTGAGTTATACCTCGGT GAGAACGACGACCTGGACTCCGGACTCGCTGGCCACTGGAAGACCGACTGA |
| Gene | >Ani_SJS72_1|g6854.t1 ATGTGGCTCTTCCGCGCCCTTTCGTCGGCCGTCTTTCTGGCCGTCACCGTCTCTTCCATTCCCCTCGCCTTTGAT GTGGGTGGGAAAACATGCGGTCTGGCCTATTCCTTGTCCCTGGCCACCTTCTACTTCCTATTTTCGCTTCTGCGC CTCACTACGCCTGATCGGTCATGGCTCCGCTCCTCCCTGATCGTCGTCATTAGCTCGACGCAATGGCTCATTATT CCGATTCTGCTTATCTGGTCGCTGAACCGCTTCTCGATCGATACCGATAATGCTGGCTCTTGGGTGGAGCGGACC TTCACGGGCAAGAGAGCCCACGACTCATCGATCCAGGAGTGGCTGTTTGGGCCCGATGGGCTGGTAGAATCAGTG ACTATCGGGAACTGGGATAAACTGCTGAGATGGTCGACCCCAGTTTTCCAGCTGGTTGAAGGATTCTGCAGCTTA TTGGTCATACAGGCTGCAGGGCAGATTACCCGCTGGCTTGTCAACCGTGGTGGGCGAAGCGATAGTTGGATGGTA TGTCCACGTCACTCCACAGTCCACATTTTGTGGGGTGCTTATTTGCTAATTCGTGCTTCGCTAGATCGGTCTCCT GGTACTCTCCGCCTCCATCATATCGAGCTCGGTATACTTCCTGTGGCGAGTCCTCCAATTTCCCGAGATCTCAAA TGTTGATGCCGCTTTAATCGGGGTATCCATCACCTGTGCTGTGATCCTTTGCGCGTGGGGTATTGGTAGTGGGCG AGGAAACCCAGTAGAAAGCTCTCTACTGTTCGCATACATCGTTCTTTGCATCTACCAGATCTTCACTGATTACCA GCCGTCACATCCTGTGGAGCAAGTCCCTTCTCCCGCTCAAGCCGGGGATTTCCCACCGCTTCCTCCTATTATCAT GGCTTCCTACACGACCCTGATGCACGCCTTGTCCACCTTGCCCTCCATCATCCACGCCGCCTTCAACGTCATCAC CGCGGTATTCGGTGCCGTCACCCCCTCCGTATTGATCTCGCTCACATACCGGATCCTTGTTCTGTACGCATCGAC TCGCATCATACCCGCTGTCCGCGAAGCGGGTGCACGAGCTCTCTCCCAAGAAGCATCGTTGGATGACTCCGATGC GGCGGGCCAGTTCTTGGGCGTACTCAGCTACTTCTCTCCGTCGATCCTGATCGCTGTATACACCAGTCTCTTGAT GCAGCACTTCGCCTCTACCTCTCAAGCAATGGGTGGCAGTGGCGAGTGGTGGAGCACTCAGGGAGCTGGCGGTGG AAACCTTTGGCGGTGGGCCAACCTCGCTGGCACCATGGCCCTGTACGCTGTTGAGTTATACCTCGGTGAGAACGA CGACCTGGACTCCGGACTCGCTGGCCACTGGAAGACCGACTGA |