Protein ID | Ani_SJS72_1|g6817.t1 |
Gene name | |
Location | scaffold_052:210221..212129 |
Strand | - |
Gene length (bp) | 1908 |
Transcript length (bp) | 1596 |
Coding sequence length (bp) | 1596 |
Protein length (aa) | 532 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF11700 | ATG22 | Vacuole effluxer Atg22 like | 1.6E-134 | 48 | 515 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 48 | 0.45 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 102 | 124 | 22 |
2 | 137 | 154 | 17 |
3 | 164 | 186 | 22 |
4 | 228 | 250 | 22 |
5 | 265 | 284 | 19 |
6 | 321 | 343 | 22 |
7 | 353 | 375 | 22 |
8 | 387 | 409 | 22 |
9 | 419 | 438 | 19 |
10 | 451 | 473 | 22 |
11 | 488 | 510 | 22 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS72_1|g6817.t1 MASLTSASNHPSRDEHKPEKLNVVQELDEDTDVEQRVAPDQIDDNFRTTRWEIWAYYAYYIGNNGLSLFTNTDFA PTACQNLLSQAAGDQGTLYFAGKQRSIDSIVLLSNGISFAIQVVLFLIIGSFADFGNWRPNILIVLSVVAYAIGF AWLGVHEADKWHVGVGLYIVGLIAYQTTLTFWTAAFPGLARNTKEMKDVAEQYVAGSISRDEYDHADTMKRSQLA NIAFYVQSVGELFVLPVIVGIMFALNVDASEQNNNWGLSVLIAFASGVWLLVSLPWFVLEKRRPGQDPQGSNIVV AGLKQLVHAARQVWKLKQSVIYLIGYFLLGDSLNTTVTVISTLQNSIVSYNTLQLTYLLLVGIAAQAVGIYAFWY AQKRLNLSTKTMFNLIAIAIILLDGWGMIGIWTQKFGFHHLWEVWLYQAYYGLFVCPWYSYSQIMISEVTPRGHE FLFFSLFSIVGKTSSFIGPLVSSAIIDASPSGNSSMPFYFLFALSVLSFGFLVAFLDLGVSREEQRGFLKGRGGL DGEELE* |
Coding | >Ani_SJS72_1|g6817.t1 ATGGCTTCTCTTACCTCTGCCTCCAATCATCCATCTCGTGATGAACACAAACCAGAAAAATTGAACGTGGTGCAA GAACTAGACGAGGATACAGATGTCGAGCAACGAGTTGCGCCCGACCAGATCGACGACAACTTTCGCACCACCAGA TGGGAGATCTGGGCTTATTATGCTTACTATATAGGCAACAATGGCCTGTCTCTATTCACAAATACCGACTTTGCA CCCACTGCCTGCCAGAACCTCCTCTCCCAAGCCGCAGGAGATCAAGGCACCCTTTACTTCGCCGGAAAGCAACGA TCCATAGACAGCATCGTTCTGCTAAGCAACGGCATCTCCTTCGCCATCCAAGTCGTCCTCTTCCTGATAATCGGC AGCTTCGCAGACTTTGGCAACTGGCGACCCAATATACTGATCGTACTCTCAGTCGTCGCATACGCCATCGGCTTC GCTTGGCTGGGTGTACACGAAGCAGACAAATGGCACGTCGGAGTCGGACTATATATCGTCGGGCTGATCGCCTAC CAGACCACGCTGACTTTCTGGACGGCAGCGTTTCCGGGTCTCGCACGGAACACGAAGGAGATGAAGGACGTCGCA GAGCAATACGTCGCAGGAAGTATTTCCAGAGATGAGTACGACCATGCCGACACGATGAAGCGCAGTCAGCTTGCG AACATTGCTTTCTATGTGCAATCGGTCGGAGAGCTGTTCGTGCTGCCTGTTATTGTGGGGATTATGTTCGCATTG AATGTCGATGCTAGCGAGCAGAACAATAATTGGGGATTGAGCGTCCTCATTGCTTTCGCTAGCGGTGTTTGGCTT CTCGTCTCGTTACCGTGGTTCGTTCTGGAGAAGAGACGCCCAGGACAGGATCCCCAGGGGAGCAATATTGTTGTT GCTGGGCTGAAGCAGCTCGTTCACGCGGCGAGACAGGTTTGGAAGTTGAAACAGAGCGTTATATATCTTATCGGA TACTTCCTCCTCGGCGATTCCCTCAACACAACAGTGACGGTCATATCCACCTTGCAAAACAGCATCGTCTCCTAC AACACACTCCAATTGACCTATCTGCTCCTAGTCGGCATCGCAGCCCAGGCCGTCGGCATCTACGCCTTCTGGTAC GCCCAAAAACGCCTCAACCTCAGCACCAAAACCATGTTCAACCTCATAGCCATAGCCATCATCCTCCTCGACGGT TGGGGTATGATAGGCATCTGGACCCAGAAGTTCGGCTTCCATCATCTCTGGGAAGTCTGGCTTTATCAAGCCTAC TACGGCCTCTTCGTCTGCCCCTGGTACAGCTACTCCCAGATCATGATATCAGAAGTGACGCCTCGCGGCCACGAA TTTCTCTTCTTCAGTTTATTCAGTATCGTGGGCAAGACGTCCTCATTCATCGGGCCGCTCGTTTCAAGCGCCATC ATCGATGCCTCGCCGTCGGGGAATAGCTCCATGCCATTCTATTTCCTTTTTGCGTTGAGTGTGCTTAGTTTTGGG TTCTTGGTGGCCTTTTTGGATTTGGGAGTGAGTAGGGAGGAGCAGAGGGGTTTCTTGAAGGGGAGGGGAGGGTTG GATGGGGAGGAATTGGAGTAG |
Transcript | >Ani_SJS72_1|g6817.t1 ATGGCTTCTCTTACCTCTGCCTCCAATCATCCATCTCGTGATGAACACAAACCAGAAAAATTGAACGTGGTGCAA GAACTAGACGAGGATACAGATGTCGAGCAACGAGTTGCGCCCGACCAGATCGACGACAACTTTCGCACCACCAGA TGGGAGATCTGGGCTTATTATGCTTACTATATAGGCAACAATGGCCTGTCTCTATTCACAAATACCGACTTTGCA CCCACTGCCTGCCAGAACCTCCTCTCCCAAGCCGCAGGAGATCAAGGCACCCTTTACTTCGCCGGAAAGCAACGA TCCATAGACAGCATCGTTCTGCTAAGCAACGGCATCTCCTTCGCCATCCAAGTCGTCCTCTTCCTGATAATCGGC AGCTTCGCAGACTTTGGCAACTGGCGACCCAATATACTGATCGTACTCTCAGTCGTCGCATACGCCATCGGCTTC GCTTGGCTGGGTGTACACGAAGCAGACAAATGGCACGTCGGAGTCGGACTATATATCGTCGGGCTGATCGCCTAC CAGACCACGCTGACTTTCTGGACGGCAGCGTTTCCGGGTCTCGCACGGAACACGAAGGAGATGAAGGACGTCGCA GAGCAATACGTCGCAGGAAGTATTTCCAGAGATGAGTACGACCATGCCGACACGATGAAGCGCAGTCAGCTTGCG AACATTGCTTTCTATGTGCAATCGGTCGGAGAGCTGTTCGTGCTGCCTGTTATTGTGGGGATTATGTTCGCATTG AATGTCGATGCTAGCGAGCAGAACAATAATTGGGGATTGAGCGTCCTCATTGCTTTCGCTAGCGGTGTTTGGCTT CTCGTCTCGTTACCGTGGTTCGTTCTGGAGAAGAGACGCCCAGGACAGGATCCCCAGGGGAGCAATATTGTTGTT GCTGGGCTGAAGCAGCTCGTTCACGCGGCGAGACAGGTTTGGAAGTTGAAACAGAGCGTTATATATCTTATCGGA TACTTCCTCCTCGGCGATTCCCTCAACACAACAGTGACGGTCATATCCACCTTGCAAAACAGCATCGTCTCCTAC AACACACTCCAATTGACCTATCTGCTCCTAGTCGGCATCGCAGCCCAGGCCGTCGGCATCTACGCCTTCTGGTAC GCCCAAAAACGCCTCAACCTCAGCACCAAAACCATGTTCAACCTCATAGCCATAGCCATCATCCTCCTCGACGGT TGGGGTATGATAGGCATCTGGACCCAGAAGTTCGGCTTCCATCATCTCTGGGAAGTCTGGCTTTATCAAGCCTAC TACGGCCTCTTCGTCTGCCCCTGGTACAGCTACTCCCAGATCATGATATCAGAAGTGACGCCTCGCGGCCACGAA TTTCTCTTCTTCAGTTTATTCAGTATCGTGGGCAAGACGTCCTCATTCATCGGGCCGCTCGTTTCAAGCGCCATC ATCGATGCCTCGCCGTCGGGGAATAGCTCCATGCCATTCTATTTCCTTTTTGCGTTGAGTGTGCTTAGTTTTGGG TTCTTGGTGGCCTTTTTGGATTTGGGAGTGAGTAGGGAGGAGCAGAGGGGTTTCTTGAAGGGGAGGGGAGGGTTG GATGGGGAGGAATTGGAGTAG |
Gene | >Ani_SJS72_1|g6817.t1 ATGGCTTCTCTTACCTCTGCCTCCAATCATCCATCTCGTGATGAACACAAACCAGAAAAATTGAACGTGGTGCAA GAACTAGACGAGGATACAGATGTCGAGCAACGAGTTGCGCCCGACCAGATCGACGACAACTTTCGCACCACCAGA TGGGAGATCTGGGCTTATTATGCGTGCGTTACAGACAATATTCTGTGTACTTGGTACTAAACAACAGCTATCAGT TACTATATAGGCAACAATGGCCTGTCTCTATTCAGTAAGGCCCTCATTTGTCAATCACGGCCGTTTTCCCAGAAA GAAAGCTAACAGCAAATACCGACTTTGCACCCACTGCCTGCCAGAACCTCCTCTCCCAAGCCGCAGGAGATCAAG GCACCCTTTACTTCGCCGGAAAGCAACGATCCATAGACAGCATCGTTCTGCTAAGCAACGGCATCTCCTTCGCCA TCCAAGTCGTCCTCTTCCTGATAATCGGCAGCTTCGCAGACTTTGGCAACTGGCGACCCAATATACTGATCGTAC TCTCAGTCGTCGCATACGCCATCGGCTTCGCTTGGCTGGGTGTACACGAAGCAGACAAATGGCACGTCGGAGTCG GACTATATATCGTCGGGCTGATCGCCTACCAGACCACGCTGACTTTCTGGACGGCAGCGTTTCCGGGTCTCGCAC GGAACACGAAGGAGATGAAGGACGTCGCAGAGCAATACGTCGCAGGAAGTATTTCCAGAGATGAGTACGACCATG CCGACACGATGAAGCGCAGTCAGCTTGCGAACATTGCTTTCTATGTGCAATCGGTCGGAGAGCTGTTCGTGCTGC CTGTTATTGTGGGGATTATGTTCGCATTGAATGTCGATGCTAGCGAGCAGAACAATAATTGGGGATTGAGCGTCC TCATTGCTTTCGCTAGCGGTGTTTGGCTTCTCGTCTCGTTACCGTGGTTCGTTCTGGAGAAGAGACGCCCAGGAC AGGATCCCCAGGGGAGCAATATTGTTGTTGCTGGGCTGAAGCAGCTCGTTCACGCGGCGAGACAGGTTTGGAAGT TGAAACAGAGCGTTATATATCTTATCGGTAGGGATATCTTCATTGTAGCTATTATATGTCACTTTGGTATCATGT ACATACAACTGACAAAAGCATATGACAGGATACTTCCTCCTCGGCGATTCCCTCAACACAACAGTGACGGTCATA TCCACCTTGCAAAACAGCATCGTCTCCTACAACACACTCCAATTGACCTATCTGCTCCTAGTCGGCATCGCAGCC CAGGCCGTCGGCATCTACGCCTTCTGGTACGCCCAAAAACGCCTCAACCTCAGCACCAAAACCATGTTCAACCTC ATAGCCATAGCCATCATCCTCCTCGACGGTTGGGGTATGATAGGCATCTGGACCCAGAAGTTCGGCTTCCATCAT CTCTGGGAAGTCTGGGTGAGTTCCCCATCTTTCACACACACACACACACACACACACACACACAACACCTCCCTT ATATACCACTAAAATATATATCCACCCACCCCCACCTCTCCACCAACTGCTAACCCTTCATCCATGATCTAGCTT TATCAAGCCTACTACGGCCTCTTCGTCTGCCCCTGGTACAGCTACTCCCAGATCATGATATCAGAAGTGACGCCT CGCGGCCACGAATTTCTCTTCTTCAGTTTATTCAGTATCGTGGGCAAGACGTCCTCATTCATCGGGCCGCTCGTT TCAAGCGCCATCATCGATGCCTCGCCGTCGGGGAATAGCTCCATGCCATTCTATTTCCTTTTTGCGTTGAGTGTG CTTAGTTTTGGGTTCTTGGTGGCCTTTTTGGATTTGGGAGTGAGTAGGGAGGAGCAGAGGGGTTTCTTGAAGGGG AGGGGAGGGTTGGATGGGGAGGAATTGGAGTAG |