Protein ID | Ani_SJS72_1|g678.t1 |
Gene name | |
Location | scaffold_003:328007..329756 |
Strand | - |
Gene length (bp) | 1749 |
Transcript length (bp) | 1620 |
Coding sequence length (bp) | 1620 |
Protein length (aa) | 540 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF06398 | Pex24p | Integral peroxisomal membrane peroxin | 1.5E-102 | 84 | 515 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 68 | 0.45 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 138 | 160 | 22 |
2 | 238 | 260 | 22 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS72_1|g678.t1 MEDHTTDALVNRDEPVPVIAAGKHNDDAERSKPGVLKRSVSKAGRSLQDRILSKILEQVMPVEDVDAESVSVGDK PIPIDSKRPAFSLPLMANNFRRFNARIGIVFLFQTRVERLLSWKQTSHTVSFLFVYSFICLDPHLLVIIPFAVLL FFVMVPAFLARHPPPPSTSTSSITPYYSYEGPALAPAKTIKPASETSKDFFRNMRDLQNCMADYSDVHDATVSAF APLTNFSNEKLSSTVFLTCTLMAALLFLTAHLLPWRLIFLVGGNAAILSMHPSFPDLVQSLAEDMLDNTAEEGPA ADKKGQESFNLGGLAMPASPSKAVSLMESLANISLDSSPEEREVEVFEIQYRSLAPYSESQWEHFLFSPMPYDPL SPSRIAGDRPKGCRFFEDVQPPSGWAWKGKKWELDLDCREWVVERMITGVGFEVSGSPSESGMTSGEIGGWVWDL PPASSRYEEAVSTLAYDVLDSINPSKGHDWKGRKKGKERVSQDYEEKVHTGSHVTGEWRRRRWIRIVHRVSLPAA DKYDQAADDDTNDT* |
Coding | >Ani_SJS72_1|g678.t1 ATGGAAGATCACACTACGGACGCCCTCGTCAATCGTGACGAGCCTGTCCCGGTCATCGCCGCTGGGAAGCACAAT GACGATGCCGAAAGATCAAAACCTGGGGTATTGAAGAGATCAGTGTCCAAGGCCGGTCGCTCTCTACAAGATAGG ATTCTCTCCAAGATCTTGGAGCAAGTTATGCCCGTCGAAGACGTCGATGCTGAATCAGTGTCAGTCGGCGACAAG CCAATTCCCATCGACAGTAAACGGCCGGCGTTTAGTCTACCTCTGATGGCCAACAATTTCCGTCGGTTTAATGCA AGGATTGGCATTGTTTTTCTGTTTCAAACCCGTGTGGAGCGTCTGCTCAGTTGGAAACAGACCTCTCACACAGTC TCCTTTCTCTTCGTATATTCCTTCATATGCTTAGATCCCCATCTTCTTGTCATTATTCCGTTCGCCGTACTCTTG TTCTTTGTTATGGTACCTGCGTTCCTCGCACGCCACCCTCCACCTCCCTCGACGTCCACTTCCAGCATCACCCCC TACTACTCATACGAAGGCCCAGCCCTTGCTCCTGCCAAAACCATTAAACCAGCGTCGGAGACGTCTAAGGATTTC TTTCGGAATATGAGAGACTTGCAAAACTGCATGGCAGATTATTCCGATGTACATGATGCGACAGTGTCCGCGTTT GCGCCCTTGACAAACTTCTCGAATGAGAAACTATCATCGACAGTATTTCTTACATGCACGCTCATGGCAGCTCTA TTATTCTTAACCGCTCACCTTCTCCCGTGGCGACTGATTTTCCTTGTTGGTGGCAATGCAGCCATTTTGTCAATG CACCCAAGCTTTCCAGATCTAGTACAGAGTCTTGCAGAGGATATGTTGGATAACACAGCGGAAGAAGGTCCGGCG GCTGATAAAAAGGGCCAGGAATCTTTCAACCTTGGGGGTCTGGCCATGCCTGCTTCGCCCTCAAAAGCCGTGTCT TTAATGGAATCACTGGCCAATATCTCCTTGGACTCCTCCCCAGAGGAGCGGGAGGTTGAGGTATTCGAGATCCAA TACCGCTCCCTTGCTCCTTACTCGGAATCTCAATGGGAACATTTTCTGTTCAGTCCTATGCCATACGATCCGCTC TCTCCCTCACGCATTGCCGGTGATCGTCCCAAGGGTTGTCGATTCTTCGAGGATGTCCAACCCCCGTCTGGATGG GCGTGGAAAGGCAAGAAGTGGGAATTAGATTTAGACTGTCGCGAGTGGGTTGTGGAGCGCATGATCACCGGAGTT GGCTTCGAGGTCTCCGGCAGTCCATCGGAAAGTGGCATGACCAGTGGTGAGATTGGGGGTTGGGTCTGGGACCTG CCTCCAGCCTCCAGCAGATATGAGGAGGCAGTGTCTACGCTAGCATATGATGTCCTAGACTCGATAAACCCATCA AAAGGACATGATTGGAAAGGCAGAAAGAAAGGGAAAGAAAGGGTCTCCCAAGATTACGAGGAGAAGGTGCACACC GGATCCCATGTAACGGGGGAATGGAGAAGGAGACGATGGATTCGCATCGTGCACCGTGTTAGTTTACCGGCTGCC GATAAGTACGATCAAGCAGCTGACGACGATACCAACGATACCTGA |
Transcript | >Ani_SJS72_1|g678.t1 ATGGAAGATCACACTACGGACGCCCTCGTCAATCGTGACGAGCCTGTCCCGGTCATCGCCGCTGGGAAGCACAAT GACGATGCCGAAAGATCAAAACCTGGGGTATTGAAGAGATCAGTGTCCAAGGCCGGTCGCTCTCTACAAGATAGG ATTCTCTCCAAGATCTTGGAGCAAGTTATGCCCGTCGAAGACGTCGATGCTGAATCAGTGTCAGTCGGCGACAAG CCAATTCCCATCGACAGTAAACGGCCGGCGTTTAGTCTACCTCTGATGGCCAACAATTTCCGTCGGTTTAATGCA AGGATTGGCATTGTTTTTCTGTTTCAAACCCGTGTGGAGCGTCTGCTCAGTTGGAAACAGACCTCTCACACAGTC TCCTTTCTCTTCGTATATTCCTTCATATGCTTAGATCCCCATCTTCTTGTCATTATTCCGTTCGCCGTACTCTTG TTCTTTGTTATGGTACCTGCGTTCCTCGCACGCCACCCTCCACCTCCCTCGACGTCCACTTCCAGCATCACCCCC TACTACTCATACGAAGGCCCAGCCCTTGCTCCTGCCAAAACCATTAAACCAGCGTCGGAGACGTCTAAGGATTTC TTTCGGAATATGAGAGACTTGCAAAACTGCATGGCAGATTATTCCGATGTACATGATGCGACAGTGTCCGCGTTT GCGCCCTTGACAAACTTCTCGAATGAGAAACTATCATCGACAGTATTTCTTACATGCACGCTCATGGCAGCTCTA TTATTCTTAACCGCTCACCTTCTCCCGTGGCGACTGATTTTCCTTGTTGGTGGCAATGCAGCCATTTTGTCAATG CACCCAAGCTTTCCAGATCTAGTACAGAGTCTTGCAGAGGATATGTTGGATAACACAGCGGAAGAAGGTCCGGCG GCTGATAAAAAGGGCCAGGAATCTTTCAACCTTGGGGGTCTGGCCATGCCTGCTTCGCCCTCAAAAGCCGTGTCT TTAATGGAATCACTGGCCAATATCTCCTTGGACTCCTCCCCAGAGGAGCGGGAGGTTGAGGTATTCGAGATCCAA TACCGCTCCCTTGCTCCTTACTCGGAATCTCAATGGGAACATTTTCTGTTCAGTCCTATGCCATACGATCCGCTC TCTCCCTCACGCATTGCCGGTGATCGTCCCAAGGGTTGTCGATTCTTCGAGGATGTCCAACCCCCGTCTGGATGG GCGTGGAAAGGCAAGAAGTGGGAATTAGATTTAGACTGTCGCGAGTGGGTTGTGGAGCGCATGATCACCGGAGTT GGCTTCGAGGTCTCCGGCAGTCCATCGGAAAGTGGCATGACCAGTGGTGAGATTGGGGGTTGGGTCTGGGACCTG CCTCCAGCCTCCAGCAGATATGAGGAGGCAGTGTCTACGCTAGCATATGATGTCCTAGACTCGATAAACCCATCA AAAGGACATGATTGGAAAGGCAGAAAGAAAGGGAAAGAAAGGGTCTCCCAAGATTACGAGGAGAAGGTGCACACC GGATCCCATGTAACGGGGGAATGGAGAAGGAGACGATGGATTCGCATCGTGCACCGTGTTAGTTTACCGGCTGCC GATAAGTACGATCAAGCAGCTGACGACGATACCAACGATACCTGA |
Gene | >Ani_SJS72_1|g678.t1 ATGGAAGATCACACTACGGACGCCCTCGTCAATCGTGACGAGCCTGTCCCGGTCATCGCCGCTGGGAAGCACAAT GACGATGCCGAAAGATCAAAACCTGGGGTATTGAAGAGATCAGTGTCCAAGGCCGGTCGCTCTCTACAAGATAGG ATTCTCTCCAAGTAGGCAACTATAAATATCCCCTTCTTATATTAATGTCGCATGAATCGCCTTGGCTGACTGGGT CCGTTTCAGGATCTTGGAGCAAGTTATGCCCGTCGAAGACGTCGATGCTGAATCAGTGTCAGTCGGCGACAAGCC AATTCCCATCGACAGTAAACGGCCGGCGTTTAGTCTACCTCTGATGGCCAACAATTTCCGTCGGTTTAATGCAAG GTGAAAAAACACTCTTCCCAGTATCTGGCTACTTCAAATGCTGATGTATTTGGTAGGATTGGCATTGTTTTTCTG TTTCAAACCCGTGTGGAGCGTCTGCTCAGTTGGAAACAGACCTCTCACACAGTCTCCTTTCTCTTCGTATATTCC TTCATATGCTTAGATCCCCATCTTCTTGTCATTATTCCGTTCGCCGTACTCTTGTTCTTTGTTATGGTACCTGCG TTCCTCGCACGCCACCCTCCACCTCCCTCGACGTCCACTTCCAGCATCACCCCCTACTACTCATACGAAGGCCCA GCCCTTGCTCCTGCCAAAACCATTAAACCAGCGTCGGAGACGTCTAAGGATTTCTTTCGGAATATGAGAGACTTG CAAAACTGCATGGCAGATTATTCCGATGTACATGATGCGACAGTGTCCGCGTTTGCGCCCTTGACAAACTTCTCG AATGAGAAACTATCATCGACAGTATTTCTTACATGCACGCTCATGGCAGCTCTATTATTCTTAACCGCTCACCTT CTCCCGTGGCGACTGATTTTCCTTGTTGGTGGCAATGCAGCCATTTTGTCAATGCACCCAAGCTTTCCAGATCTA GTACAGAGTCTTGCAGAGGATATGTTGGATAACACAGCGGAAGAAGGTCCGGCGGCTGATAAAAAGGGCCAGGAA TCTTTCAACCTTGGGGGTCTGGCCATGCCTGCTTCGCCCTCAAAAGCCGTGTCTTTAATGGAATCACTGGCCAAT ATCTCCTTGGACTCCTCCCCAGAGGAGCGGGAGGTTGAGGTATTCGAGATCCAATACCGCTCCCTTGCTCCTTAC TCGGAATCTCAATGGGAACATTTTCTGTTCAGTCCTATGCCATACGATCCGCTCTCTCCCTCACGCATTGCCGGT GATCGTCCCAAGGGTTGTCGATTCTTCGAGGATGTCCAACCCCCGTCTGGATGGGCGTGGAAAGGCAAGAAGTGG GAATTAGATTTAGACTGTCGCGAGTGGGTTGTGGAGCGCATGATCACCGGAGTTGGCTTCGAGGTCTCCGGCAGT CCATCGGAAAGTGGCATGACCAGTGGTGAGATTGGGGGTTGGGTCTGGGACCTGCCTCCAGCCTCCAGCAGATAT GAGGAGGCAGTGTCTACGCTAGCATATGATGTCCTAGACTCGATAAACCCATCAAAAGGACATGATTGGAAAGGC AGAAAGAAAGGGAAAGAAAGGGTCTCCCAAGATTACGAGGAGAAGGTGCACACCGGATCCCATGTAACGGGGGAA TGGAGAAGGAGACGATGGATTCGCATCGTGCACCGTGTTAGTTTACCGGCTGCCGATAAGTACGATCAAGCAGCT GACGACGATACCAACGATACCTGA |