© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS72_1|g669.t1 |
| Gene name | |
| Location | scaffold_003:302080..303902 |
| Strand | - |
| Gene length (bp) | 1822 |
| Transcript length (bp) | 1599 |
| Coding sequence length (bp) | 1599 |
| Protein length (aa) | 533 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF13520 | AA_permease_2 | Amino acid permease | 5.0E-65 | 35 | 482 |
| PF00324 | AA_permease | Amino acid permease | 1.0E-21 | 60 | 492 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0055085 | transmembrane transport | Yes |
| GO:0016020 | membrane | Yes |
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0009987 | cellular process | No |
| GO:0110165 | cellular anatomical entity | No |
| GO:0005215 | transporter activity | No |
| GO:0005575 | cellular_component | No |
| GO:0003674 | molecular_function | No |
| GO:0006810 | transport | No |
| GO:0008150 | biological_process | No |
| GO:0051234 | establishment of localization | No |
| GO:0051179 | localization | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 66 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 37 | 59 | 22 |
| 2 | 69 | 86 | 17 |
| 3 | 123 | 145 | 22 |
| 4 | 160 | 180 | 20 |
| 5 | 187 | 209 | 22 |
| 6 | 232 | 249 | 17 |
| 7 | 270 | 292 | 22 |
| 8 | 319 | 341 | 22 |
| 9 | 371 | 386 | 15 |
| 10 | 401 | 423 | 22 |
| 11 | 436 | 458 | 22 |
| 12 | 473 | 495 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS72_1|g669.t1 MAVSEDEIQPVGPLTTGEDVRLEHLGYEQELKRSFGLLGMIGFSFSVVTSWTALSGVFIVGVTSGGPPVMVFSFI GVSLLTLAVAIPMAEMCSMYPVAGGQYSWVAALAPPKISRELSYITGWFMLIGLLAMGATNNSIAAQFVLGMANL VFPSYEIQRWQTVLVAYLVAILAAVINIWGPHLLNRLARFILVWNITAFFITVVVLLATNDHKQSASFVFVEFQN FTGWDRAMAAIVGILQACFGMCCYDAPSHMTEEMKSASKQAPQAIIMSVVLGAVTGFAFLLVLCFCIGDIATTQN SPTGVPVIQIFYDSTGSKVAACFLASMIAVIVIVAGNNILAEGSRCVYAFARDNGLPFSKFLAKVDKKRQVPINA VLLTLVVQLALDAIDFGTSTGFETVIAISTEGFYLSYAMALGSRLLGYVTNHRRTLTGPFALPTSMSISLNVLGL LFLLFASITFNFPESFPVTKDSMNYTSAAIGVIAVISVATWVVTGRKHFTGPGAWDGSDSRVTEGKVVELNEEQE TEIEKKG* |
| Coding | >Ani_SJS72_1|g669.t1 ATGGCGGTATCAGAAGATGAGATCCAGCCCGTGGGCCCTCTTACGACAGGGGAGGATGTGAGATTGGAGCATCTG GGCTATGAGCAGGAGCTCAAACGGTCATTTGGCCTCCTGGGTATGATCGGATTCAGTTTCAGCGTCGTCACCTCA TGGACCGCATTAAGTGGTGTCTTCATCGTTGGCGTCACGTCGGGCGGGCCCCCAGTTATGGTCTTTAGTTTCATT GGTGTCAGTCTTCTTACCCTAGCCGTCGCCATCCCCATGGCCGAAATGTGTTCGATGTATCCAGTGGCTGGAGGC CAATACTCGTGGGTGGCCGCCTTGGCTCCCCCCAAAATTTCCCGGGAGTTATCATACATTACTGGATGGTTCATG CTGATAGGACTGCTCGCAATGGGCGCAACGAACAATTCCATCGCCGCACAGTTCGTACTCGGAATGGCAAACCTC GTCTTCCCATCCTACGAGATCCAGCGCTGGCAAACCGTCTTAGTAGCCTACCTCGTGGCCATCCTTGCTGCTGTT ATCAACATCTGGGGGCCCCATCTGCTAAACCGGCTCGCTCGTTTCATTCTTGTCTGGAATATAACCGCTTTCTTC ATCACTGTCGTCGTCCTCCTGGCGACAAATGACCATAAGCAGTCTGCATCTTTTGTCTTTGTCGAGTTCCAGAAT TTTACCGGCTGGGACCGGGCAATGGCAGCCATTGTAGGCATCCTACAGGCCTGCTTCGGTATGTGCTGCTACGAC GCCCCCTCACACATGACCGAGGAAATGAAATCCGCCTCCAAGCAAGCACCGCAAGCAATCATAATGTCCGTTGTC CTTGGCGCCGTCACCGGCTTTGCTTTCCTTCTAGTACTCTGCTTCTGCATTGGTGATATCGCCACCACTCAGAAC TCCCCTACCGGAGTGCCTGTCATCCAGATCTTTTACGACTCAACTGGTAGCAAAGTGGCTGCCTGCTTCTTGGCC AGCATGATTGCTGTAATAGTTATTGTCGCAGGGAACAACATCCTTGCAGAGGGCTCCCGCTGTGTCTACGCCTTC GCCCGCGACAACGGCCTCCCGTTCAGCAAATTCCTCGCCAAAGTCGACAAAAAGCGCCAGGTCCCCATCAATGCC GTCCTGCTCACCCTGGTCGTTCAGCTCGCATTGGATGCAATTGACTTTGGCACCTCGACAGGCTTCGAGACCGTC ATTGCCATTTCCACTGAGGGATTCTATTTATCCTACGCAATGGCCCTTGGAAGTCGCCTGCTAGGCTATGTGACC AACCACCGACGTACCCTTACGGGCCCATTCGCGCTACCCACCTCAATGTCTATTAGTCTGAACGTGCTTGGGCTG CTGTTCTTGCTGTTTGCGTCCATCACGTTCAACTTTCCCGAGTCGTTCCCGGTGACGAAGGACTCGATGAATTAC ACCAGTGCTGCGATTGGAGTGATTGCAGTGATTAGCGTGGCGACATGGGTAGTGACGGGGCGAAAGCATTTCACA GGCCCAGGGGCGTGGGACGGAAGTGACAGTAGGGTTACAGAGGGGAAAGTGGTTGAGTTGAACGAGGAGCAAGAG ACTGAGATAGAGAAGAAGGGATGA |
| Transcript | >Ani_SJS72_1|g669.t1 ATGGCGGTATCAGAAGATGAGATCCAGCCCGTGGGCCCTCTTACGACAGGGGAGGATGTGAGATTGGAGCATCTG GGCTATGAGCAGGAGCTCAAACGGTCATTTGGCCTCCTGGGTATGATCGGATTCAGTTTCAGCGTCGTCACCTCA TGGACCGCATTAAGTGGTGTCTTCATCGTTGGCGTCACGTCGGGCGGGCCCCCAGTTATGGTCTTTAGTTTCATT GGTGTCAGTCTTCTTACCCTAGCCGTCGCCATCCCCATGGCCGAAATGTGTTCGATGTATCCAGTGGCTGGAGGC CAATACTCGTGGGTGGCCGCCTTGGCTCCCCCCAAAATTTCCCGGGAGTTATCATACATTACTGGATGGTTCATG CTGATAGGACTGCTCGCAATGGGCGCAACGAACAATTCCATCGCCGCACAGTTCGTACTCGGAATGGCAAACCTC GTCTTCCCATCCTACGAGATCCAGCGCTGGCAAACCGTCTTAGTAGCCTACCTCGTGGCCATCCTTGCTGCTGTT ATCAACATCTGGGGGCCCCATCTGCTAAACCGGCTCGCTCGTTTCATTCTTGTCTGGAATATAACCGCTTTCTTC ATCACTGTCGTCGTCCTCCTGGCGACAAATGACCATAAGCAGTCTGCATCTTTTGTCTTTGTCGAGTTCCAGAAT TTTACCGGCTGGGACCGGGCAATGGCAGCCATTGTAGGCATCCTACAGGCCTGCTTCGGTATGTGCTGCTACGAC GCCCCCTCACACATGACCGAGGAAATGAAATCCGCCTCCAAGCAAGCACCGCAAGCAATCATAATGTCCGTTGTC CTTGGCGCCGTCACCGGCTTTGCTTTCCTTCTAGTACTCTGCTTCTGCATTGGTGATATCGCCACCACTCAGAAC TCCCCTACCGGAGTGCCTGTCATCCAGATCTTTTACGACTCAACTGGTAGCAAAGTGGCTGCCTGCTTCTTGGCC AGCATGATTGCTGTAATAGTTATTGTCGCAGGGAACAACATCCTTGCAGAGGGCTCCCGCTGTGTCTACGCCTTC GCCCGCGACAACGGCCTCCCGTTCAGCAAATTCCTCGCCAAAGTCGACAAAAAGCGCCAGGTCCCCATCAATGCC GTCCTGCTCACCCTGGTCGTTCAGCTCGCATTGGATGCAATTGACTTTGGCACCTCGACAGGCTTCGAGACCGTC ATTGCCATTTCCACTGAGGGATTCTATTTATCCTACGCAATGGCCCTTGGAAGTCGCCTGCTAGGCTATGTGACC AACCACCGACGTACCCTTACGGGCCCATTCGCGCTACCCACCTCAATGTCTATTAGTCTGAACGTGCTTGGGCTG CTGTTCTTGCTGTTTGCGTCCATCACGTTCAACTTTCCCGAGTCGTTCCCGGTGACGAAGGACTCGATGAATTAC ACCAGTGCTGCGATTGGAGTGATTGCAGTGATTAGCGTGGCGACATGGGTAGTGACGGGGCGAAAGCATTTCACA GGCCCAGGGGCGTGGGACGGAAGTGACAGTAGGGTTACAGAGGGGAAAGTGGTTGAGTTGAACGAGGAGCAAGAG ACTGAGATAGAGAAGAAGGGATGA |
| Gene | >Ani_SJS72_1|g669.t1 ATGGCGGTATCAGAAGATGAGATCCAGCCCGTGGGCCCTCTTACGACAGGGGAGGATGTGAGATTGGAGCATCTG GGCTATGAGCAGGGTATGTTGACTGGACTGGGGCCCGTGAAAGTGTGCTAATTTCCGCAGAGCTCAAACGGTCAT TTGGCCTCCTGGGTATGATCGGATTCAGTTTCAGCGTCGTCACCTCGTAAGCCATTCCCATCGAGATATAGAGCC CATTGTGCTGACTCTGCCTCAAGATGGACCGCATTAAGTGGTGTCTTCATCGTTGGCGTCACGTCGGGCGGGCCC CCAGTTATGGTCTTTAGTTTCATTGGTGTCAGTCTTCTTACCCTAGCCGTCGCCATCCCCATGGCCGAAATGTGT TCGATGTATCCAGTGGCTGGAGGCCAATACTCGTGGGTGGCCGCCTTGGCTCCCCCCAAAATTTCCCGGGAGTTA TCATACATTACTGGATGGTTCATGCTGATAGGTATGACTCCAACAACATTCGCACTGTAAGCGCTGAGCAAAACT CACCAGATACCTACTAGGACTGCTCGCAATGGGCGCAACGAACAATTCCATCGCCGCACAGTTCGTACTCGGAAT GGCAAACCTCGTCTTCCCATCCTACGAGATCCAGCGCTGGCAAACCGTCTTAGTAGCCTACCTCGTGGCCATCCT TGCTGCTGTTATCAACATCTGGGGGCCCCATCTGCTAAACCGGCTCGCTCGTTTCATTCTTGTCTGGAATATAAC CGCTTTCTTCATCACTGTCGTCGTCCTCCTGGCGACAAATGACCATAAGCAGTCTGCATCTTTTGTCTTTGTCGA GTTCCAGAATTTTACCGGCTGGGACCGGGCAATGGCAGCCATTGTAGGCATCCTACAGGCCTGCTTCGGTATGTG CTGCTACGACGCCCCCTCACACATGACCGAGGAAATGAAATCCGCCTCCAAGCAAGCACCGCAAGCAATCATAAT GTCCGTTGTCCTTGGCGCCGTCACCGGCTTTGCTTTCCTTCTAGTACTCTGCTTCTGCATTGGTGATATCGCCAC CACTCAGAACTCCCCTACCGGAGTGCCTGTCATCCAGATCTTTTACGACTCAACTGGTAGCAAAGTGGCTGCCTG CTTCTTGGCCAGCATGATTGCTGTAATAGTTATTGTCGCAGGGAACAACATCCTTGCAGAGGGCTCCCGCTGTGT CTACGCCTTCGCCCGCGACAACGGCCTCCCGTTCAGCAAATTCCTCGCCAAAGTCGACAAAAAGCGCCAGGTCCC CATCAATGCCGTCCTGCTCACCCTGGTCGTTCAGCTCGCATTGGATGCAATTGACTTTGGCACCTCGACAGGCTT CGAGACCGTCATTGCCATTTCCACTGAGGGATTCTGTAGGTCTCTCCACATATATCCCCCAATAATAAATAGCAA ACACATAACTAACAGAGTATTAGATTTATCCTACGCAATGGCCCTTGGAAGTCGCCTGCTAGGCTATGTGACCAA CCACCGACGTACCCTTACGGGCCCATTCGCGCTACCCACCTCAATGTCTATTAGTCTGAACGTGCTTGGGCTGCT GTTCTTGCTGTTTGCGTCCATCACGTTCAACTTTCCCGAGTCGTTCCCGGTGACGAAGGACTCGATGAATTACAC CAGTGCTGCGATTGGAGTGATTGCAGTGATTAGCGTGGCGACATGGGTAGTGACGGGGCGAAAGCATTTCACAGG CCCAGGGGCGTGGGACGGAAGTGACAGTAGGGTTACAGAGGGGAAAGTGGTTGAGTTGAACGAGGAGCAAGAGAC TGAGATAGAGAAGAAGGGATGA |