© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS72_1|g6579.t1 |
| Gene name | |
| Location | scaffold_049:216028..217474 |
| Strand | - |
| Gene length (bp) | 1446 |
| Transcript length (bp) | 1344 |
| Coding sequence length (bp) | 1344 |
| Protein length (aa) | 448 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00155 | Aminotran_1_2 | Aminotransferase class I and II | 2.5E-30 | 59 | 408 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0030170 | pyridoxal phosphate binding | Yes |
| GO:0009058 | biosynthetic process | Yes |
| GO:0019842 | vitamin binding | No |
| GO:0008152 | metabolic process | No |
| GO:1901363 | heterocyclic compound binding | No |
| GO:0036094 | small molecule binding | No |
| GO:0003674 | molecular_function | No |
| GO:0043167 | ion binding | No |
| GO:0043168 | anion binding | No |
| GO:0070279 | vitamin B6 binding | No |
| GO:0097159 | organic cyclic compound binding | No |
| GO:0008150 | biological_process | No |
| GO:0005488 | binding | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 22 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS72_1|g6579.t1 MPPSSTGTWKKSSTCAEPSTAASLHTKEQTSMVDFSSTDILGLSTSGSVRKGYLDELAQHPDFTLSSHGSRLTDG NSRYLEDVERELAAFHGAEAALIVNTGSLGNAAIFSVIPRPGDAIVYDELIHASVHDGMKDSLALCRKAFRHNDA ESLYDALVAVQESQPQIRNRTRSVLVAVESVYSMDGDICPLQELIETAKEVFPDGNVQFVIDEAHSTGVIGPNGA GLVSALGLESEVAIRLHTFGKALAATGAVILCNETVRTMLINYARSIMFSVAPSFPMLASIRATYQLLRSGETQE QAQDRVQEIVKFFLETMTSNPIWSRASDTGLLRLPTYEDADVQPFLTQIIQLRTRTKHNFYLAFHLQRAGFSVFP ISYPVVPKGTERVRIIFHASNTDAEVNSLVAAIAEWAQEMLEIESSGDRTRVPAAARHVYALIAQANLNGSG* |
| Coding | >Ani_SJS72_1|g6579.t1 ATGCCTCCGTCTTCTACCGGAACCTGGAAGAAGAGCTCGACGTGCGCCGAGCCCAGCACGGCTGCATCGCTGCAC ACCAAAGAGCAAACCTCCATGGTGGACTTTTCCTCTACCGATATCCTCGGGCTGAGCACCTCGGGCTCCGTCCGC AAAGGCTACCTGGACGAGCTGGCCCAACACCCCGATTTCACGCTCAGCAGCCACGGCTCACGTCTGACCGACGGC AACTCCAGATACCTGGAAGACGTCGAGCGTGAGCTGGCTGCATTTCACGGCGCCGAGGCTGCGTTGATTGTCAAC ACGGGGAGCCTGGGCAATGCCGCCATTTTCTCCGTTATTCCACGCCCCGGCGATGCCATTGTGTATGATGAGCTC ATTCACGCCAGCGTGCACGATGGTATGAAGGACAGCTTGGCCCTGTGTCGCAAGGCCTTCCGCCACAATGATGCC GAATCGCTGTATGATGCCCTGGTGGCCGTCCAGGAATCGCAGCCCCAGATCCGCAACCGCACCCGATCGGTTTTG GTGGCGGTTGAGTCGGTCTATAGCATGGACGGGGATATCTGCCCGCTCCAGGAGCTGATTGAAACAGCCAAGGAG GTGTTTCCGGACGGCAATGTTCAATTTGTCATTGACGAGGCGCACAGCACTGGGGTGATTGGGCCCAACGGTGCT GGGTTGGTGAGCGCCCTGGGGCTGGAAAGCGAAGTGGCGATCCGACTGCATACGTTTGGGAAGGCGCTGGCTGCG ACAGGAGCCGTAATCCTATGCAACGAGACCGTGCGCACAATGCTGATCAACTACGCCCGCAGCATCATGTTCTCC GTGGCGCCGTCCTTCCCCATGCTGGCCTCCATTCGCGCTACATACCAGCTCCTGCGCAGTGGCGAGACACAAGAG CAGGCCCAGGACCGCGTCCAGGAGATCGTGAAATTCTTCCTGGAGACCATGACCTCCAATCCGATCTGGAGCAGG GCCAGCGACACCGGGCTTCTCCGTCTTCCCACGTACGAAGACGCGGATGTCCAACCATTCCTCACCCAAATCATC CAGCTACGGACGCGCACCAAGCACAACTTCTACCTTGCGTTCCACCTGCAACGGGCCGGGTTCTCCGTTTTCCCT ATCTCGTATCCGGTGGTACCCAAGGGGACGGAACGCGTTCGGATCATCTTCCATGCGTCGAACACGGACGCGGAG GTGAATTCCCTGGTTGCTGCGATTGCGGAATGGGCCCAGGAGATGTTGGAGATTGAGAGTAGCGGGGATCGAACG AGGGTGCCAGCTGCGGCGCGGCATGTGTATGCGTTGATTGCCCAGGCTAATCTGAATGGGAGCGGGTAG |
| Transcript | >Ani_SJS72_1|g6579.t1 ATGCCTCCGTCTTCTACCGGAACCTGGAAGAAGAGCTCGACGTGCGCCGAGCCCAGCACGGCTGCATCGCTGCAC ACCAAAGAGCAAACCTCCATGGTGGACTTTTCCTCTACCGATATCCTCGGGCTGAGCACCTCGGGCTCCGTCCGC AAAGGCTACCTGGACGAGCTGGCCCAACACCCCGATTTCACGCTCAGCAGCCACGGCTCACGTCTGACCGACGGC AACTCCAGATACCTGGAAGACGTCGAGCGTGAGCTGGCTGCATTTCACGGCGCCGAGGCTGCGTTGATTGTCAAC ACGGGGAGCCTGGGCAATGCCGCCATTTTCTCCGTTATTCCACGCCCCGGCGATGCCATTGTGTATGATGAGCTC ATTCACGCCAGCGTGCACGATGGTATGAAGGACAGCTTGGCCCTGTGTCGCAAGGCCTTCCGCCACAATGATGCC GAATCGCTGTATGATGCCCTGGTGGCCGTCCAGGAATCGCAGCCCCAGATCCGCAACCGCACCCGATCGGTTTTG GTGGCGGTTGAGTCGGTCTATAGCATGGACGGGGATATCTGCCCGCTCCAGGAGCTGATTGAAACAGCCAAGGAG GTGTTTCCGGACGGCAATGTTCAATTTGTCATTGACGAGGCGCACAGCACTGGGGTGATTGGGCCCAACGGTGCT GGGTTGGTGAGCGCCCTGGGGCTGGAAAGCGAAGTGGCGATCCGACTGCATACGTTTGGGAAGGCGCTGGCTGCG ACAGGAGCCGTAATCCTATGCAACGAGACCGTGCGCACAATGCTGATCAACTACGCCCGCAGCATCATGTTCTCC GTGGCGCCGTCCTTCCCCATGCTGGCCTCCATTCGCGCTACATACCAGCTCCTGCGCAGTGGCGAGACACAAGAG CAGGCCCAGGACCGCGTCCAGGAGATCGTGAAATTCTTCCTGGAGACCATGACCTCCAATCCGATCTGGAGCAGG GCCAGCGACACCGGGCTTCTCCGTCTTCCCACGTACGAAGACGCGGATGTCCAACCATTCCTCACCCAAATCATC CAGCTACGGACGCGCACCAAGCACAACTTCTACCTTGCGTTCCACCTGCAACGGGCCGGGTTCTCCGTTTTCCCT ATCTCGTATCCGGTGGTACCCAAGGGGACGGAACGCGTTCGGATCATCTTCCATGCGTCGAACACGGACGCGGAG GTGAATTCCCTGGTTGCTGCGATTGCGGAATGGGCCCAGGAGATGTTGGAGATTGAGAGTAGCGGGGATCGAACG AGGGTGCCAGCTGCGGCGCGGCATGTGTATGCGTTGATTGCCCAGGCTAATCTGAATGGGAGCGGGTAG |
| Gene | >Ani_SJS72_1|g6579.t1 ATGCCTCCGTCTTCTACCGGAACCTGGAAGAAGAGCTCGACGTGCGCCGAGCCCAGCACGGCTGCATCGCTGCAC ACCAAAGAGCAAACCTCCATGGTGGACTTTTCCTCTACCGATATCCTCGGGCTGAGCACCTCGGGCTCCGTCCGC AAAGGCTACCTGGACGAGCTGGCCCAACACCCCGATTTCACGCTCAGCAGCCACGGCTCACGTCTGACCGACGGC AACTCCAGATACCTGGAAGACGTCGAGCGTGAGCTGGCTGCATTTCACGGCGCCGAGGCTGCGTTGATTGTCAAC ACGGGGAGCCTGGGCAATGCCGCCATTTTCTCCGTTATTCCACGCCCCGGCGATGCCATTGTGTATGATGAGCTC ATTCACGCCAGCGTGCACGATGGTATGAAGGACAGCTTGGCCCTGTGTCGCAAGGCCTTCCGCCACAATGATGCC GAATCGCTGTATGATGCCCTGGTGGCCGTCCAGGAATCGCAGCCCCAGATCCGCAACCGCACCCGATCGGTTTTG GTGGCGGTTGAGTCGGTCTATAGCATGGACGGGGATATCTGCCCGCTCCAGGAGCTGATTGAAACAGCCAAGGAG GTGTTTCCGGACGGCAATGTTCAATTTGTCATTGACGAGGCGCACAGCACTGGGGTGATTGGGCCCAACGGTGCT GGGTTGGTGAGCGCCCTGGGGCTGGAAAGCGAAGTGGCGATCCGACTGCATACGTTTGGGAAGGCGCTGGCTGCG ACAGGAGGTAAGACACGATTGAACCGGTGTTGCTGAAGGATACACTGACTTGACTCGGTAGCCGTAATCCTATGC AACGAGACCGTGCGCACAATGCTGATCAACTACGCCCGCAGCATCATGTTCTCCGTGGCGCCGTCCTTCCCCATG CTGGCCTCCATTCGCGCTACATACCAGCTCCTGCGCAGTGGCGAGACACAAGAGGTATAATGTGGCTCCCTACTT TACCGAAAGCTTAAGCTGACACGGCAGCAGGCCCAGGACCGCGTCCAGGAGATCGTGAAATTCTTCCTGGAGACC ATGACCTCCAATCCGATCTGGAGCAGGGCCAGCGACACCGGGCTTCTCCGTCTTCCCACGTACGAAGACGCGGAT GTCCAACCATTCCTCACCCAAATCATCCAGCTACGGACGCGCACCAAGCACAACTTCTACCTTGCGTTCCACCTG CAACGGGCCGGGTTCTCCGTTTTCCCTATCTCGTATCCGGTGGTACCCAAGGGGACGGAACGCGTTCGGATCATC TTCCATGCGTCGAACACGGACGCGGAGGTGAATTCCCTGGTTGCTGCGATTGCGGAATGGGCCCAGGAGATGTTG GAGATTGAGAGTAGCGGGGATCGAACGAGGGTGCCAGCTGCGGCGCGGCATGTGTATGCGTTGATTGCCCAGGCT AATCTGAATGGGAGCGGGTAG |