© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS72_1|g6540.t1 |
| Gene name | |
| Location | scaffold_049:110474..112463 |
| Strand | + |
| Gene length (bp) | 1989 |
| Transcript length (bp) | 1662 |
| Coding sequence length (bp) | 1662 |
| Protein length (aa) | 554 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00083 | Sugar_tr | Sugar (and other) transporter | 7.6E-13 | 120 | 506 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0055085 | transmembrane transport | Yes |
| GO:0016021 | integral component of membrane | Yes |
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0009987 | cellular process | No |
| GO:0110165 | cellular anatomical entity | No |
| GO:0005215 | transporter activity | No |
| GO:0005575 | cellular_component | No |
| GO:0031224 | intrinsic component of membrane | No |
| GO:0003674 | molecular_function | No |
| GO:0006810 | transport | No |
| GO:0008150 | biological_process | No |
| GO:0051234 | establishment of localization | No |
| GO:0051179 | localization | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 12 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 70 | 89 | 19 |
| 2 | 127 | 149 | 22 |
| 3 | 156 | 178 | 22 |
| 4 | 198 | 220 | 22 |
| 5 | 227 | 249 | 22 |
| 6 | 337 | 359 | 22 |
| 7 | 371 | 393 | 22 |
| 8 | 398 | 420 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS72_1|g6540.t1 MSLATEFDKAQILLEADEFVTRYNLHDSRDLIRKGALLSYDPHDYARVDGLSEDEITALQNGNVDRPSRLWLFCV LAGLLYVLLGISLPPDDFSIFWGASSGHFRMVLSVAIPLLEHPLVGLLSNCIGRRQALCTASILAILRACLAILL KRFQYWLLPGFAALFVDRLLAGVALATLSFNMPLHLAESVPAPVRGRAMVFWPLVLGAFEFPLRSLLLWASIPLY QYVTRVHISIIPVAASLILSLRYMTLESPYQLVARGHIASALQTLYKSRLSKIVAARDLYRIYATSSFESSLASQ SARRATTYSITFMLTRALIISPELLTEHLLNRPETDISRLTLMISSKGFGLGAIAIIWYWTDCDRLGERRFMLLR VLIMQLLYLILPLDPYVYDSLVYFCIQIALSVGLSVVTMVYAVEVFPYSCRDQGYAITVSVYNIVRVVMQIIGSQ PSYPSRYPDGDPRHLDCFIALYRAIQKYTIPIVSVLTWVFMRETAKIPLEDMEKLFEARNRDILLYQVKIVWPYL FKKYIFWQNVVLEPFDESRYGTSAIALV* |
| Coding | >Ani_SJS72_1|g6540.t1 ATGAGTCTTGCAACTGAGTTTGATAAAGCACAGATCCTCCTCGAAGCCGATGAGTTTGTGACCAGGTACAATCTG CACGATTCCCGAGACTTGATTAGAAAGGGCGCTCTATTATCCTACGATCCTCATGATTACGCTCGCGTTGATGGA CTGAGCGAAGACGAGATCACCGCATTGCAAAATGGCAACGTGGACCGCCCGTCAAGACTCTGGTTGTTTTGCGTT CTGGCAGGTCTTCTGTATGTTCTGCTGGGCATCTCACTTCCCCCAGATGATTTCTCTATATTCTGGGGAGCTTCC TCCGGTCATTTTCGCATGGTCCTATCAGTTGCAATTCCACTGCTAGAACACCCGCTTGTTGGACTTTTAAGTAAC TGCATTGGTCGACGTCAAGCGCTTTGTACCGCATCAATTCTCGCCATACTGAGAGCATGTCTTGCTATACTCCTG AAACGTTTCCAATATTGGCTGCTACCAGGGTTTGCAGCACTCTTTGTCGACCGTTTACTCGCCGGAGTGGCATTA GCGACACTATCGTTCAACATGCCTCTACATCTCGCCGAATCTGTCCCGGCTCCAGTCCGGGGCCGTGCGATGGTA TTTTGGCCTCTGGTATTAGGCGCCTTTGAATTTCCTTTGAGATCCCTTTTATTGTGGGCATCTATCCCACTCTAT CAATATGTGACCCGGGTCCATATCTCAATTATACCTGTCGCAGCATCATTGATCTTGTCATTGCGGTATATGACT TTAGAGTCACCATACCAGCTTGTCGCACGAGGCCACATAGCATCTGCCCTTCAGACACTGTACAAGTCTCGTCTA TCGAAAATTGTTGCCGCTCGTGACCTCTATCGAATTTACGCCACCAGCTCTTTTGAGTCATCTCTAGCAAGCCAA TCCGCCAGACGAGCCACCACCTACTCAATCACATTTATGCTCACCAGGGCCCTGATAATCTCCCCTGAGCTGCTG ACAGAACATCTTTTAAACAGACCCGAGACTGATATTTCTCGACTCACGTTGATGATTTCCTCCAAAGGCTTTGGT CTCGGTGCAATTGCTATTATCTGGTACTGGACTGACTGTGACCGATTGGGAGAACGCCGTTTCATGTTGCTCCGG GTATTGATCATGCAATTGCTGTATCTAATACTACCACTGGATCCATACGTTTATGACTCACTCGTATATTTTTGC ATTCAAATCGCGCTGTCCGTCGGTCTTTCCGTCGTGACCATGGTGTACGCTGTCGAGGTCTTTCCTTACAGTTGT CGGGACCAAGGATACGCGATCACGGTATCAGTCTACAATATCGTGCGCGTTGTAATGCAAATCATAGGCTCGCAG CCTTCTTACCCATCTCGCTACCCAGATGGTGACCCGAGACATTTGGACTGTTTTATTGCGTTATACCGAGCAATA CAAAAATACACCATTCCGATTGTTTCTGTGTTGACATGGGTTTTTATGCGGGAGACTGCAAAGATCCCACTCGAG GATATGGAGAAACTATTCGAGGCACGAAACCGGGATATTCTATTGTATCAGGTGAAGATTGTCTGGCCATATTTG TTCAAAAAGTATATTTTTTGGCAAAATGTGGTTCTTGAGCCGTTCGATGAGTCAAGGTATGGTACCAGTGCTATT GCTTTGGTGTAA |
| Transcript | >Ani_SJS72_1|g6540.t1 ATGAGTCTTGCAACTGAGTTTGATAAAGCACAGATCCTCCTCGAAGCCGATGAGTTTGTGACCAGGTACAATCTG CACGATTCCCGAGACTTGATTAGAAAGGGCGCTCTATTATCCTACGATCCTCATGATTACGCTCGCGTTGATGGA CTGAGCGAAGACGAGATCACCGCATTGCAAAATGGCAACGTGGACCGCCCGTCAAGACTCTGGTTGTTTTGCGTT CTGGCAGGTCTTCTGTATGTTCTGCTGGGCATCTCACTTCCCCCAGATGATTTCTCTATATTCTGGGGAGCTTCC TCCGGTCATTTTCGCATGGTCCTATCAGTTGCAATTCCACTGCTAGAACACCCGCTTGTTGGACTTTTAAGTAAC TGCATTGGTCGACGTCAAGCGCTTTGTACCGCATCAATTCTCGCCATACTGAGAGCATGTCTTGCTATACTCCTG AAACGTTTCCAATATTGGCTGCTACCAGGGTTTGCAGCACTCTTTGTCGACCGTTTACTCGCCGGAGTGGCATTA GCGACACTATCGTTCAACATGCCTCTACATCTCGCCGAATCTGTCCCGGCTCCAGTCCGGGGCCGTGCGATGGTA TTTTGGCCTCTGGTATTAGGCGCCTTTGAATTTCCTTTGAGATCCCTTTTATTGTGGGCATCTATCCCACTCTAT CAATATGTGACCCGGGTCCATATCTCAATTATACCTGTCGCAGCATCATTGATCTTGTCATTGCGGTATATGACT TTAGAGTCACCATACCAGCTTGTCGCACGAGGCCACATAGCATCTGCCCTTCAGACACTGTACAAGTCTCGTCTA TCGAAAATTGTTGCCGCTCGTGACCTCTATCGAATTTACGCCACCAGCTCTTTTGAGTCATCTCTAGCAAGCCAA TCCGCCAGACGAGCCACCACCTACTCAATCACATTTATGCTCACCAGGGCCCTGATAATCTCCCCTGAGCTGCTG ACAGAACATCTTTTAAACAGACCCGAGACTGATATTTCTCGACTCACGTTGATGATTTCCTCCAAAGGCTTTGGT CTCGGTGCAATTGCTATTATCTGGTACTGGACTGACTGTGACCGATTGGGAGAACGCCGTTTCATGTTGCTCCGG GTATTGATCATGCAATTGCTGTATCTAATACTACCACTGGATCCATACGTTTATGACTCACTCGTATATTTTTGC ATTCAAATCGCGCTGTCCGTCGGTCTTTCCGTCGTGACCATGGTGTACGCTGTCGAGGTCTTTCCTTACAGTTGT CGGGACCAAGGATACGCGATCACGGTATCAGTCTACAATATCGTGCGCGTTGTAATGCAAATCATAGGCTCGCAG CCTTCTTACCCATCTCGCTACCCAGATGGTGACCCGAGACATTTGGACTGTTTTATTGCGTTATACCGAGCAATA CAAAAATACACCATTCCGATTGTTTCTGTGTTGACATGGGTTTTTATGCGGGAGACTGCAAAGATCCCACTCGAG GATATGGAGAAACTATTCGAGGCACGAAACCGGGATATTCTATTGTATCAGGTGAAGATTGTCTGGCCATATTTG TTCAAAAAGTATATTTTTTGGCAAAATGTGGTTCTTGAGCCGTTCGATGAGTCAAGGTATGGTACCAGTGCTATT GCTTTGGTGTAA |
| Gene | >Ani_SJS72_1|g6540.t1 ATGAGGTATTCTAGGCCCTATTTCTGGATACCCTCAACCTTTCTTTTGTCCGCTAAAGACTAACAAAGAAAGTCT TGCAACTGAGTTTGATAAAGCACAGATCCTCCTCGAAGCCGATGAGTTTGTGACCAGGTACAATCTGCACGATTC CCGAGACTTGATTAGAAAGGGCGCTCTATTATCCTACGATCCTCATGATTACGCTCGCGTTGATGGACTGAGCGA AGACGAGATCACCGCATTGCAAAATGGCAACGTGGACCGCCCGTCAAGACTCTGGTTGTTTTGCGTTCTGGCAGG TCTTCTGTAGTCAGTCATCTTACTGGCACGGCCATCGAGTGATTTTTTTATAATTCAGCTAACCTGCTAGTGTTC TGCTGGGCATCTCACTTCCCCCAGATGATTTCTCTATATTCTGGGGAGCTTCCTCCGGTCATTTTCGCATGTAAG GCAACTTCATCCCACTTACCTAACATCGCTAAGATCTCCTTGACAGGGTCCTATCAGTTGCAATTCCACTGCTAG AACACCCGCTTGTTGGACTTTTAAGTAACTGCATTGGTCGACGTCAAGCGCTTTGTACCGCATCAATTCTCGCCA TACTGAGAGCATGTCTTGCTATACTCCTGAAACGTTTCCAATATTGGCTGCTACCAGGGTTTGCAGCACTCTTTG TCGACCGTTTACTCGCCGGAGTGGCATTAGCGACACTATCGTTCAACATGCCTCTACATCTCGCCGAATCTGTCC CGGCTCCAGTCCGGGGCCGTGCGATGGTATTTTGGCCTCTGTATGTCTCCAGTTTCAAGTCAAATCGGCGCCCAT TAACATCATCACCTTCAAACAGGGTATTAGGCGCCTTTGAATTTCCTTTGAGATCCCTTTTATTGTGGGCATCTA TCCCACTCTATCAATATGTGACCCGGGTCCATATCTCAATTATACCTGTCGCAGCATCATTGATCTTGTCATTGC GGTATATGACTTTAGAGTCACCATACCAGCTTGTCGCACGAGGCCACATAGCATCTGCCCTTCAGACACTGTACA AGTCTCGTCTATCGAAAATTGTTGCCGCTCGTGACCTCTATCGAATTTACGCCACCAGCTCTTTTGAGTCATCTC TAGCAAGCCAATCCGCCAGACGAGCCACCACCTACTCAATCACATTTATGCTCACCAGGGCCCTGATAATCTCCC CTGAGCTGCTGACAGAACATCTTTTAAACAGACCCGAGACTGATATTTCTCGACTCACGTTGATGATTTCCTCCA AAGGCTTTGGTCTCGGTGCAATTGCTATTATCTGGTACTGGACTGACTGTGACCGATTGGGAGAACGCCGTTTCA TGTTGCTCCGGGTATTGATCATGCAATTGCTGTATCTAATACTACCACTGGATCCATACGTTTATGACTCACTCG TATATTTTTGCATTCAAATCGCGCTGTCCGTCGGTCTTTCCGTCGTGACCATGGTGTACGCTGTCGAGGTCTTTC CTTACAGTTGTCGGGGTATGGATTCCAGTTCAAATGCTGCAGTCGTTGAAAGATTGCTTCAGGCAATAAAGCAAT ACGCATGACTAACAGGCACTATCTCCTACAGACCAAGGATACGCGATCACGGTATCAGTCTACAATATCGTGCGC GTTGTAATGCAAATCATAGGCTCGCAGCCTTCTTACCCATCTCGCTACCCAGATGGTGACCCGAGACATTTGGAC TGTTTTATTGCGTTATACCGAGCAATACAAAAATACACCATTCCGATTGTTTCTGTGTTGACATGGGTTTTTATG CGGGAGACTGCAAAGATCCCACTCGAGGATATGGAGAAACTATTCGAGGCACGAAACCGGGATATTCTATTGTAT CAGGTGAAGATTGTCTGGCCATATTTGTTCAAAAAGTATATTTTTTGGCAAAATGTGGTTCTTGAGCCGTTCGAT GAGTCAAGGTATGGTACCAGTGCTATTGCTTTGGTGTAA |