Protein ID | Ani_SJS72_1|g6540.t1 |
Gene name | |
Location | scaffold_049:110474..112463 |
Strand | + |
Gene length (bp) | 1989 |
Transcript length (bp) | 1662 |
Coding sequence length (bp) | 1662 |
Protein length (aa) | 554 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF00083 | Sugar_tr | Sugar (and other) transporter | 7.6E-13 | 120 | 506 |
GO Term | Description | Terminal node |
---|---|---|
GO:0055085 | transmembrane transport | Yes |
GO:0016021 | integral component of membrane | Yes |
GO:0022857 | transmembrane transporter activity | Yes |
GO:0009987 | cellular process | No |
GO:0110165 | cellular anatomical entity | No |
GO:0005215 | transporter activity | No |
GO:0005575 | cellular_component | No |
GO:0031224 | intrinsic component of membrane | No |
GO:0003674 | molecular_function | No |
GO:0006810 | transport | No |
GO:0008150 | biological_process | No |
GO:0051234 | establishment of localization | No |
GO:0051179 | localization | No |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 12 | 0.45 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 70 | 89 | 19 |
2 | 127 | 149 | 22 |
3 | 156 | 178 | 22 |
4 | 198 | 220 | 22 |
5 | 227 | 249 | 22 |
6 | 337 | 359 | 22 |
7 | 371 | 393 | 22 |
8 | 398 | 420 | 22 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS72_1|g6540.t1 MSLATEFDKAQILLEADEFVTRYNLHDSRDLIRKGALLSYDPHDYARVDGLSEDEITALQNGNVDRPSRLWLFCV LAGLLYVLLGISLPPDDFSIFWGASSGHFRMVLSVAIPLLEHPLVGLLSNCIGRRQALCTASILAILRACLAILL KRFQYWLLPGFAALFVDRLLAGVALATLSFNMPLHLAESVPAPVRGRAMVFWPLVLGAFEFPLRSLLLWASIPLY QYVTRVHISIIPVAASLILSLRYMTLESPYQLVARGHIASALQTLYKSRLSKIVAARDLYRIYATSSFESSLASQ SARRATTYSITFMLTRALIISPELLTEHLLNRPETDISRLTLMISSKGFGLGAIAIIWYWTDCDRLGERRFMLLR VLIMQLLYLILPLDPYVYDSLVYFCIQIALSVGLSVVTMVYAVEVFPYSCRDQGYAITVSVYNIVRVVMQIIGSQ PSYPSRYPDGDPRHLDCFIALYRAIQKYTIPIVSVLTWVFMRETAKIPLEDMEKLFEARNRDILLYQVKIVWPYL FKKYIFWQNVVLEPFDESRYGTSAIALV* |
Coding | >Ani_SJS72_1|g6540.t1 ATGAGTCTTGCAACTGAGTTTGATAAAGCACAGATCCTCCTCGAAGCCGATGAGTTTGTGACCAGGTACAATCTG CACGATTCCCGAGACTTGATTAGAAAGGGCGCTCTATTATCCTACGATCCTCATGATTACGCTCGCGTTGATGGA CTGAGCGAAGACGAGATCACCGCATTGCAAAATGGCAACGTGGACCGCCCGTCAAGACTCTGGTTGTTTTGCGTT CTGGCAGGTCTTCTGTATGTTCTGCTGGGCATCTCACTTCCCCCAGATGATTTCTCTATATTCTGGGGAGCTTCC TCCGGTCATTTTCGCATGGTCCTATCAGTTGCAATTCCACTGCTAGAACACCCGCTTGTTGGACTTTTAAGTAAC TGCATTGGTCGACGTCAAGCGCTTTGTACCGCATCAATTCTCGCCATACTGAGAGCATGTCTTGCTATACTCCTG AAACGTTTCCAATATTGGCTGCTACCAGGGTTTGCAGCACTCTTTGTCGACCGTTTACTCGCCGGAGTGGCATTA GCGACACTATCGTTCAACATGCCTCTACATCTCGCCGAATCTGTCCCGGCTCCAGTCCGGGGCCGTGCGATGGTA TTTTGGCCTCTGGTATTAGGCGCCTTTGAATTTCCTTTGAGATCCCTTTTATTGTGGGCATCTATCCCACTCTAT CAATATGTGACCCGGGTCCATATCTCAATTATACCTGTCGCAGCATCATTGATCTTGTCATTGCGGTATATGACT TTAGAGTCACCATACCAGCTTGTCGCACGAGGCCACATAGCATCTGCCCTTCAGACACTGTACAAGTCTCGTCTA TCGAAAATTGTTGCCGCTCGTGACCTCTATCGAATTTACGCCACCAGCTCTTTTGAGTCATCTCTAGCAAGCCAA TCCGCCAGACGAGCCACCACCTACTCAATCACATTTATGCTCACCAGGGCCCTGATAATCTCCCCTGAGCTGCTG ACAGAACATCTTTTAAACAGACCCGAGACTGATATTTCTCGACTCACGTTGATGATTTCCTCCAAAGGCTTTGGT CTCGGTGCAATTGCTATTATCTGGTACTGGACTGACTGTGACCGATTGGGAGAACGCCGTTTCATGTTGCTCCGG GTATTGATCATGCAATTGCTGTATCTAATACTACCACTGGATCCATACGTTTATGACTCACTCGTATATTTTTGC ATTCAAATCGCGCTGTCCGTCGGTCTTTCCGTCGTGACCATGGTGTACGCTGTCGAGGTCTTTCCTTACAGTTGT CGGGACCAAGGATACGCGATCACGGTATCAGTCTACAATATCGTGCGCGTTGTAATGCAAATCATAGGCTCGCAG CCTTCTTACCCATCTCGCTACCCAGATGGTGACCCGAGACATTTGGACTGTTTTATTGCGTTATACCGAGCAATA CAAAAATACACCATTCCGATTGTTTCTGTGTTGACATGGGTTTTTATGCGGGAGACTGCAAAGATCCCACTCGAG GATATGGAGAAACTATTCGAGGCACGAAACCGGGATATTCTATTGTATCAGGTGAAGATTGTCTGGCCATATTTG TTCAAAAAGTATATTTTTTGGCAAAATGTGGTTCTTGAGCCGTTCGATGAGTCAAGGTATGGTACCAGTGCTATT GCTTTGGTGTAA |
Transcript | >Ani_SJS72_1|g6540.t1 ATGAGTCTTGCAACTGAGTTTGATAAAGCACAGATCCTCCTCGAAGCCGATGAGTTTGTGACCAGGTACAATCTG CACGATTCCCGAGACTTGATTAGAAAGGGCGCTCTATTATCCTACGATCCTCATGATTACGCTCGCGTTGATGGA CTGAGCGAAGACGAGATCACCGCATTGCAAAATGGCAACGTGGACCGCCCGTCAAGACTCTGGTTGTTTTGCGTT CTGGCAGGTCTTCTGTATGTTCTGCTGGGCATCTCACTTCCCCCAGATGATTTCTCTATATTCTGGGGAGCTTCC TCCGGTCATTTTCGCATGGTCCTATCAGTTGCAATTCCACTGCTAGAACACCCGCTTGTTGGACTTTTAAGTAAC TGCATTGGTCGACGTCAAGCGCTTTGTACCGCATCAATTCTCGCCATACTGAGAGCATGTCTTGCTATACTCCTG AAACGTTTCCAATATTGGCTGCTACCAGGGTTTGCAGCACTCTTTGTCGACCGTTTACTCGCCGGAGTGGCATTA GCGACACTATCGTTCAACATGCCTCTACATCTCGCCGAATCTGTCCCGGCTCCAGTCCGGGGCCGTGCGATGGTA TTTTGGCCTCTGGTATTAGGCGCCTTTGAATTTCCTTTGAGATCCCTTTTATTGTGGGCATCTATCCCACTCTAT CAATATGTGACCCGGGTCCATATCTCAATTATACCTGTCGCAGCATCATTGATCTTGTCATTGCGGTATATGACT TTAGAGTCACCATACCAGCTTGTCGCACGAGGCCACATAGCATCTGCCCTTCAGACACTGTACAAGTCTCGTCTA TCGAAAATTGTTGCCGCTCGTGACCTCTATCGAATTTACGCCACCAGCTCTTTTGAGTCATCTCTAGCAAGCCAA TCCGCCAGACGAGCCACCACCTACTCAATCACATTTATGCTCACCAGGGCCCTGATAATCTCCCCTGAGCTGCTG ACAGAACATCTTTTAAACAGACCCGAGACTGATATTTCTCGACTCACGTTGATGATTTCCTCCAAAGGCTTTGGT CTCGGTGCAATTGCTATTATCTGGTACTGGACTGACTGTGACCGATTGGGAGAACGCCGTTTCATGTTGCTCCGG GTATTGATCATGCAATTGCTGTATCTAATACTACCACTGGATCCATACGTTTATGACTCACTCGTATATTTTTGC ATTCAAATCGCGCTGTCCGTCGGTCTTTCCGTCGTGACCATGGTGTACGCTGTCGAGGTCTTTCCTTACAGTTGT CGGGACCAAGGATACGCGATCACGGTATCAGTCTACAATATCGTGCGCGTTGTAATGCAAATCATAGGCTCGCAG CCTTCTTACCCATCTCGCTACCCAGATGGTGACCCGAGACATTTGGACTGTTTTATTGCGTTATACCGAGCAATA CAAAAATACACCATTCCGATTGTTTCTGTGTTGACATGGGTTTTTATGCGGGAGACTGCAAAGATCCCACTCGAG GATATGGAGAAACTATTCGAGGCACGAAACCGGGATATTCTATTGTATCAGGTGAAGATTGTCTGGCCATATTTG TTCAAAAAGTATATTTTTTGGCAAAATGTGGTTCTTGAGCCGTTCGATGAGTCAAGGTATGGTACCAGTGCTATT GCTTTGGTGTAA |
Gene | >Ani_SJS72_1|g6540.t1 ATGAGGTATTCTAGGCCCTATTTCTGGATACCCTCAACCTTTCTTTTGTCCGCTAAAGACTAACAAAGAAAGTCT TGCAACTGAGTTTGATAAAGCACAGATCCTCCTCGAAGCCGATGAGTTTGTGACCAGGTACAATCTGCACGATTC CCGAGACTTGATTAGAAAGGGCGCTCTATTATCCTACGATCCTCATGATTACGCTCGCGTTGATGGACTGAGCGA AGACGAGATCACCGCATTGCAAAATGGCAACGTGGACCGCCCGTCAAGACTCTGGTTGTTTTGCGTTCTGGCAGG TCTTCTGTAGTCAGTCATCTTACTGGCACGGCCATCGAGTGATTTTTTTATAATTCAGCTAACCTGCTAGTGTTC TGCTGGGCATCTCACTTCCCCCAGATGATTTCTCTATATTCTGGGGAGCTTCCTCCGGTCATTTTCGCATGTAAG GCAACTTCATCCCACTTACCTAACATCGCTAAGATCTCCTTGACAGGGTCCTATCAGTTGCAATTCCACTGCTAG AACACCCGCTTGTTGGACTTTTAAGTAACTGCATTGGTCGACGTCAAGCGCTTTGTACCGCATCAATTCTCGCCA TACTGAGAGCATGTCTTGCTATACTCCTGAAACGTTTCCAATATTGGCTGCTACCAGGGTTTGCAGCACTCTTTG TCGACCGTTTACTCGCCGGAGTGGCATTAGCGACACTATCGTTCAACATGCCTCTACATCTCGCCGAATCTGTCC CGGCTCCAGTCCGGGGCCGTGCGATGGTATTTTGGCCTCTGTATGTCTCCAGTTTCAAGTCAAATCGGCGCCCAT TAACATCATCACCTTCAAACAGGGTATTAGGCGCCTTTGAATTTCCTTTGAGATCCCTTTTATTGTGGGCATCTA TCCCACTCTATCAATATGTGACCCGGGTCCATATCTCAATTATACCTGTCGCAGCATCATTGATCTTGTCATTGC GGTATATGACTTTAGAGTCACCATACCAGCTTGTCGCACGAGGCCACATAGCATCTGCCCTTCAGACACTGTACA AGTCTCGTCTATCGAAAATTGTTGCCGCTCGTGACCTCTATCGAATTTACGCCACCAGCTCTTTTGAGTCATCTC TAGCAAGCCAATCCGCCAGACGAGCCACCACCTACTCAATCACATTTATGCTCACCAGGGCCCTGATAATCTCCC CTGAGCTGCTGACAGAACATCTTTTAAACAGACCCGAGACTGATATTTCTCGACTCACGTTGATGATTTCCTCCA AAGGCTTTGGTCTCGGTGCAATTGCTATTATCTGGTACTGGACTGACTGTGACCGATTGGGAGAACGCCGTTTCA TGTTGCTCCGGGTATTGATCATGCAATTGCTGTATCTAATACTACCACTGGATCCATACGTTTATGACTCACTCG TATATTTTTGCATTCAAATCGCGCTGTCCGTCGGTCTTTCCGTCGTGACCATGGTGTACGCTGTCGAGGTCTTTC CTTACAGTTGTCGGGGTATGGATTCCAGTTCAAATGCTGCAGTCGTTGAAAGATTGCTTCAGGCAATAAAGCAAT ACGCATGACTAACAGGCACTATCTCCTACAGACCAAGGATACGCGATCACGGTATCAGTCTACAATATCGTGCGC GTTGTAATGCAAATCATAGGCTCGCAGCCTTCTTACCCATCTCGCTACCCAGATGGTGACCCGAGACATTTGGAC TGTTTTATTGCGTTATACCGAGCAATACAAAAATACACCATTCCGATTGTTTCTGTGTTGACATGGGTTTTTATG CGGGAGACTGCAAAGATCCCACTCGAGGATATGGAGAAACTATTCGAGGCACGAAACCGGGATATTCTATTGTAT CAGGTGAAGATTGTCTGGCCATATTTGTTCAAAAAGTATATTTTTTGGCAAAATGTGGTTCTTGAGCCGTTCGAT GAGTCAAGGTATGGTACCAGTGCTATTGCTTTGGTGTAA |