Protein ID | Ani_SJS72_1|g6497.t1 |
Gene name | |
Location | scaffold_048:241569..242766 |
Strand | - |
Gene length (bp) | 1197 |
Transcript length (bp) | 1197 |
Coding sequence length (bp) | 1197 |
Protein length (aa) | 399 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF07993 | NAD_binding_4 | Male sterility protein | 1.3E-34 | 15 | 281 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 14 | 0.5 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 12 | 34 | 22 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS72_1|g6497.t1 MDKHIEWYRDQVIFLTGGTGNLGACLLYKLTLQLPTKKIFLLCRGSVQRALDKLEAAMADQFDDVLDSHRVQFMV GDTSKPCLGLKPSDLRLLQEEVTVVINAAADISLQQPLHLSIQPNCIAHLQLLTLLREFSRLKSFLHVSSTSVNS FLPDGIIEERIYPLCDEDLDPEKVLSQILSTGQSDYTEKFIAPYALCKYLTERLILKQDNLSFDTLIVRPSLIGP AIRDPYPFYGHDEGMPLQSAIHSLATDPDYGLDKLGKGINLDAVFDEIPVDLVANTCLAQLAAGKVGIVQAAGSL YVASTTGEITTTMIQCVAPMGIEKIRRGEIRQSQNLAPIFYQVARKYMRNWDIRCDRSEHLREETGVLGLSLNGH DPKAFMKHRWENVSNSVFGLSAT* |
Coding | >Ani_SJS72_1|g6497.t1 ATGGATAAACATATTGAATGGTATCGCGATCAAGTGATTTTCCTGACTGGGGGGACAGGAAATCTAGGAGCATGC CTTCTATACAAGCTCACTCTACAGTTGCCCACCAAAAAGATCTTTCTGCTTTGTCGTGGCTCCGTGCAACGTGCC CTCGATAAGCTGGAGGCAGCAATGGCGGATCAATTTGATGATGTCTTAGACTCTCATCGCGTCCAATTCATGGTG GGAGATACCTCCAAACCTTGTCTCGGGTTAAAGCCTTCGGATCTGCGACTACTCCAAGAGGAGGTCACTGTGGTC ATCAATGCAGCGGCGGACATTTCGCTACAACAGCCACTTCATCTCAGCATCCAGCCAAATTGCATAGCTCATCTG CAGTTACTCACATTGCTTCGTGAATTCAGTCGTCTCAAGTCATTCCTGCACGTATCATCTACATCTGTCAACAGC TTTCTTCCTGATGGTATTATTGAAGAACGTATATACCCGCTTTGCGATGAGGATCTAGACCCAGAGAAAGTTCTG TCACAGATTCTCAGTACTGGACAGTCAGACTACACTGAGAAATTTATCGCACCCTACGCATTATGCAAATACCTT ACGGAGAGGTTGATCTTGAAGCAAGATAACCTCTCCTTTGACACACTAATTGTGCGACCATCCCTTATCGGGCCA GCCATTCGCGACCCATATCCATTCTATGGCCACGATGAAGGCATGCCCTTACAGTCTGCGATCCACAGCCTGGCG ACAGACCCTGATTATGGGTTAGATAAGCTTGGTAAAGGGATCAACCTGGATGCTGTCTTCGACGAGATCCCTGTC GACCTGGTCGCCAATACTTGTCTAGCCCAACTGGCCGCGGGTAAAGTAGGGATTGTCCAGGCTGCGGGTAGTCTC TATGTGGCATCGACCACTGGTGAAATTACTACCACCATGATTCAGTGCGTGGCACCCATGGGGATAGAAAAGATC CGTCGCGGAGAGATACGCCAGAGTCAGAACTTGGCACCCATATTTTACCAGGTGGCTCGAAAATATATGCGCAAC TGGGATATTCGCTGTGATCGATCAGAGCATCTGAGGGAGGAGACTGGTGTCTTGGGGCTTAGCCTCAATGGGCAT GATCCGAAGGCTTTCATGAAACATCGTTGGGAGAACGTGTCTAACTCGGTCTTCGGTTTGTCTGCAACTTAG |
Transcript | >Ani_SJS72_1|g6497.t1 ATGGATAAACATATTGAATGGTATCGCGATCAAGTGATTTTCCTGACTGGGGGGACAGGAAATCTAGGAGCATGC CTTCTATACAAGCTCACTCTACAGTTGCCCACCAAAAAGATCTTTCTGCTTTGTCGTGGCTCCGTGCAACGTGCC CTCGATAAGCTGGAGGCAGCAATGGCGGATCAATTTGATGATGTCTTAGACTCTCATCGCGTCCAATTCATGGTG GGAGATACCTCCAAACCTTGTCTCGGGTTAAAGCCTTCGGATCTGCGACTACTCCAAGAGGAGGTCACTGTGGTC ATCAATGCAGCGGCGGACATTTCGCTACAACAGCCACTTCATCTCAGCATCCAGCCAAATTGCATAGCTCATCTG CAGTTACTCACATTGCTTCGTGAATTCAGTCGTCTCAAGTCATTCCTGCACGTATCATCTACATCTGTCAACAGC TTTCTTCCTGATGGTATTATTGAAGAACGTATATACCCGCTTTGCGATGAGGATCTAGACCCAGAGAAAGTTCTG TCACAGATTCTCAGTACTGGACAGTCAGACTACACTGAGAAATTTATCGCACCCTACGCATTATGCAAATACCTT ACGGAGAGGTTGATCTTGAAGCAAGATAACCTCTCCTTTGACACACTAATTGTGCGACCATCCCTTATCGGGCCA GCCATTCGCGACCCATATCCATTCTATGGCCACGATGAAGGCATGCCCTTACAGTCTGCGATCCACAGCCTGGCG ACAGACCCTGATTATGGGTTAGATAAGCTTGGTAAAGGGATCAACCTGGATGCTGTCTTCGACGAGATCCCTGTC GACCTGGTCGCCAATACTTGTCTAGCCCAACTGGCCGCGGGTAAAGTAGGGATTGTCCAGGCTGCGGGTAGTCTC TATGTGGCATCGACCACTGGTGAAATTACTACCACCATGATTCAGTGCGTGGCACCCATGGGGATAGAAAAGATC CGTCGCGGAGAGATACGCCAGAGTCAGAACTTGGCACCCATATTTTACCAGGTGGCTCGAAAATATATGCGCAAC TGGGATATTCGCTGTGATCGATCAGAGCATCTGAGGGAGGAGACTGGTGTCTTGGGGCTTAGCCTCAATGGGCAT GATCCGAAGGCTTTCATGAAACATCGTTGGGAGAACGTGTCTAACTCGGTCTTCGGTTTGTCTGCAACTTAG |
Gene | >Ani_SJS72_1|g6497.t1 ATGGATAAACATATTGAATGGTATCGCGATCAAGTGATTTTCCTGACTGGGGGGACAGGAAATCTAGGAGCATGC CTTCTATACAAGCTCACTCTACAGTTGCCCACCAAAAAGATCTTTCTGCTTTGTCGTGGCTCCGTGCAACGTGCC CTCGATAAGCTGGAGGCAGCAATGGCGGATCAATTTGATGATGTCTTAGACTCTCATCGCGTCCAATTCATGGTG GGAGATACCTCCAAACCTTGTCTCGGGTTAAAGCCTTCGGATCTGCGACTACTCCAAGAGGAGGTCACTGTGGTC ATCAATGCAGCGGCGGACATTTCGCTACAACAGCCACTTCATCTCAGCATCCAGCCAAATTGCATAGCTCATCTG CAGTTACTCACATTGCTTCGTGAATTCAGTCGTCTCAAGTCATTCCTGCACGTATCATCTACATCTGTCAACAGC TTTCTTCCTGATGGTATTATTGAAGAACGTATATACCCGCTTTGCGATGAGGATCTAGACCCAGAGAAAGTTCTG TCACAGATTCTCAGTACTGGACAGTCAGACTACACTGAGAAATTTATCGCACCCTACGCATTATGCAAATACCTT ACGGAGAGGTTGATCTTGAAGCAAGATAACCTCTCCTTTGACACACTAATTGTGCGACCATCCCTTATCGGGCCA GCCATTCGCGACCCATATCCATTCTATGGCCACGATGAAGGCATGCCCTTACAGTCTGCGATCCACAGCCTGGCG ACAGACCCTGATTATGGGTTAGATAAGCTTGGTAAAGGGATCAACCTGGATGCTGTCTTCGACGAGATCCCTGTC GACCTGGTCGCCAATACTTGTCTAGCCCAACTGGCCGCGGGTAAAGTAGGGATTGTCCAGGCTGCGGGTAGTCTC TATGTGGCATCGACCACTGGTGAAATTACTACCACCATGATTCAGTGCGTGGCACCCATGGGGATAGAAAAGATC CGTCGCGGAGAGATACGCCAGAGTCAGAACTTGGCACCCATATTTTACCAGGTGGCTCGAAAATATATGCGCAAC TGGGATATTCGCTGTGATCGATCAGAGCATCTGAGGGAGGAGACTGGTGTCTTGGGGCTTAGCCTCAATGGGCAT GATCCGAAGGCTTTCATGAAACATCGTTGGGAGAACGTGTCTAACTCGGTCTTCGGTTTGTCTGCAACTTAG |