© 2022 - Robin Ohm - Utrecht University - The Netherlands
Built with Python Django and Wagtail
| Protein ID | Ani_SJS72_1|g6482.t1 |
| Gene name | |
| Location | scaffold_048:207931..209492 |
| Strand | + |
| Gene length (bp) | 1561 |
| Transcript length (bp) | 1392 |
| Coding sequence length (bp) | 1392 |
| Protein length (aa) | 464 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF05978 | UNC-93 | Ion channel regulatory protein UNC-93 | 8.8E-11 | 74 | 324 |
| PF07690 | MFS_1 | Major Facilitator Superfamily | 1.7E-10 | 50 | 408 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0055085 | transmembrane transport | Yes |
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0009987 | cellular process | No |
| GO:0005215 | transporter activity | No |
| GO:0003674 | molecular_function | No |
| GO:0006810 | transport | No |
| GO:0008150 | biological_process | No |
| GO:0051234 | establishment of localization | No |
| GO:0051179 | localization | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 56 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 39 | 61 | 22 |
| 2 | 76 | 98 | 22 |
| 3 | 100 | 117 | 17 |
| 4 | 127 | 149 | 22 |
| 5 | 162 | 184 | 22 |
| 6 | 194 | 216 | 22 |
| 7 | 253 | 275 | 22 |
| 8 | 285 | 307 | 22 |
| 9 | 320 | 342 | 22 |
| 10 | 362 | 384 | 22 |
| 11 | 427 | 449 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS72_1|g6482.t1 MSLEKQPSSTDEEVQDTPSIPIEHTRDHKVKWYRSTTYNALVLGLCNFLAPGIWTAMNSLGGGGSESPYLVDAAN ALTFGLMVFSCFFGSIVVRIVGIKWTLILGTVGYAPYAAGLYTHNRFGTDWLVLFGAALCGLSAGIFWMAESAIA LSYPEPENQGRFLGLWLSFRVGGQILGGAINLGLNVHRNTAGSVSYAVFGVFIALQALGPAAGLLLTEPGKVMRR DGMKVKLRIAHSAWYEIKAMTRLFFRKEFLCIVPLIAQATYTEAVMFTYLDLWFSVRVRALGSFLSGVLALVSGN VLGAFLDSTKRFGLKTRSRGAFFVVLGLQGGWWIWATVVTTQYTNEGRSGIDWVDEGFAKGFVLYLMWVAGFQLN YMFLYFVVGNLAADEEEVVRISGLLRGMESAVQAVSYGLSSVGIMASVGGTYLNFGLWGISLLPAWLVIRQFGVS LEDRKLVRDYGRD* |
| Coding | >Ani_SJS72_1|g6482.t1 ATGTCTCTCGAAAAACAACCCTCATCAACAGATGAAGAGGTACAAGATACACCCTCTATTCCAATCGAACACACC CGGGATCACAAAGTAAAATGGTACCGGTCAACAACCTACAACGCCCTTGTCCTCGGGCTCTGCAACTTCCTAGCC CCAGGAATCTGGACCGCAATGAACAGTCTCGGCGGCGGCGGGTCCGAAAGTCCTTACCTCGTCGACGCGGCCAAC GCACTCACCTTCGGCCTGATGGTCTTCTCCTGTTTCTTCGGAAGCATTGTCGTGCGCATCGTCGGTATAAAGTGG ACGCTCATCCTGGGGACAGTCGGATACGCACCATACGCCGCAGGATTATACACCCATAACCGATTCGGGACGGAC TGGCTGGTTCTCTTCGGCGCAGCGCTGTGCGGTCTCTCAGCGGGTATATTCTGGATGGCGGAGAGTGCCATTGCC TTATCGTATCCGGAGCCGGAGAATCAGGGACGGTTCCTGGGTTTGTGGTTGAGTTTTCGTGTCGGAGGGCAGATC CTCGGCGGGGCAATTAACCTGGGTTTGAATGTTCACCGGAATACAGCGGGAAGTGTGAGTTATGCTGTCTTTGGG GTGTTTATTGCCTTGCAGGCACTCGGGCCTGCGGCGGGCTTGTTGCTCACTGAGCCGGGGAAGGTGATGAGACGG GATGGGATGAAGGTGAAGTTACGGATTGCGCATAGCGCATGGTACGAAATAAAGGCCATGACGCGGTTGTTCTTC CGGAAGGAGTTCCTGTGTATAGTGCCGCTGATCGCGCAGGCGACGTACACGGAGGCGGTGATGTTCACGTACTTG GATCTGTGGTTCAGTGTGCGGGTGCGGGCGCTGGGCAGTTTCTTGTCGGGTGTGTTGGCGCTGGTGTCTGGCAAT GTGTTGGGGGCGTTCTTGGATAGTACGAAGCGGTTTGGGTTGAAGACGAGGAGTCGGGGGGCGTTTTTTGTGGTG TTGGGGTTGCAGGGAGGGTGGTGGATTTGGGCGACGGTTGTGACGACGCAGTATACGAATGAGGGGAGGAGTGGG ATTGACTGGGTGGATGAGGGGTTTGCGAAGGGCTTTGTGCTCTATTTGATGTGGGTTGCTGGGTTTCAGTTGAAT TATATGTTCCTGTACTTTGTGGTTGGCAATTTGGCGGCTGATGAGGAAGAGGTCGTGCGGATTAGTGGGTTGTTG CGGGGGATGGAGTCGGCTGTGCAGGCTGTTTCGTATGGTTTGAGCAGTGTTGGTATCATGGCTTCTGTGGGAGGC ACCTATCTCAATTTTGGCCTTTGGGGCATCTCGCTGCTGCCGGCGTGGCTTGTGATTCGCCAGTTTGGCGTAAGC TTGGAGGATCGCAAGTTGGTGAGAGATTACGGACGTGATTAG |
| Transcript | >Ani_SJS72_1|g6482.t1 ATGTCTCTCGAAAAACAACCCTCATCAACAGATGAAGAGGTACAAGATACACCCTCTATTCCAATCGAACACACC CGGGATCACAAAGTAAAATGGTACCGGTCAACAACCTACAACGCCCTTGTCCTCGGGCTCTGCAACTTCCTAGCC CCAGGAATCTGGACCGCAATGAACAGTCTCGGCGGCGGCGGGTCCGAAAGTCCTTACCTCGTCGACGCGGCCAAC GCACTCACCTTCGGCCTGATGGTCTTCTCCTGTTTCTTCGGAAGCATTGTCGTGCGCATCGTCGGTATAAAGTGG ACGCTCATCCTGGGGACAGTCGGATACGCACCATACGCCGCAGGATTATACACCCATAACCGATTCGGGACGGAC TGGCTGGTTCTCTTCGGCGCAGCGCTGTGCGGTCTCTCAGCGGGTATATTCTGGATGGCGGAGAGTGCCATTGCC TTATCGTATCCGGAGCCGGAGAATCAGGGACGGTTCCTGGGTTTGTGGTTGAGTTTTCGTGTCGGAGGGCAGATC CTCGGCGGGGCAATTAACCTGGGTTTGAATGTTCACCGGAATACAGCGGGAAGTGTGAGTTATGCTGTCTTTGGG GTGTTTATTGCCTTGCAGGCACTCGGGCCTGCGGCGGGCTTGTTGCTCACTGAGCCGGGGAAGGTGATGAGACGG GATGGGATGAAGGTGAAGTTACGGATTGCGCATAGCGCATGGTACGAAATAAAGGCCATGACGCGGTTGTTCTTC CGGAAGGAGTTCCTGTGTATAGTGCCGCTGATCGCGCAGGCGACGTACACGGAGGCGGTGATGTTCACGTACTTG GATCTGTGGTTCAGTGTGCGGGTGCGGGCGCTGGGCAGTTTCTTGTCGGGTGTGTTGGCGCTGGTGTCTGGCAAT GTGTTGGGGGCGTTCTTGGATAGTACGAAGCGGTTTGGGTTGAAGACGAGGAGTCGGGGGGCGTTTTTTGTGGTG TTGGGGTTGCAGGGAGGGTGGTGGATTTGGGCGACGGTTGTGACGACGCAGTATACGAATGAGGGGAGGAGTGGG ATTGACTGGGTGGATGAGGGGTTTGCGAAGGGCTTTGTGCTCTATTTGATGTGGGTTGCTGGGTTTCAGTTGAAT TATATGTTCCTGTACTTTGTGGTTGGCAATTTGGCGGCTGATGAGGAAGAGGTCGTGCGGATTAGTGGGTTGTTG CGGGGGATGGAGTCGGCTGTGCAGGCTGTTTCGTATGGTTTGAGCAGTGTTGGTATCATGGCTTCTGTGGGAGGC ACCTATCTCAATTTTGGCCTTTGGGGCATCTCGCTGCTGCCGGCGTGGCTTGTGATTCGCCAGTTTGGCGTAAGC TTGGAGGATCGCAAGTTGGTGAGAGATTACGGACGTGATTAG |
| Gene | >Ani_SJS72_1|g6482.t1 ATGTCTCTCGAAAAACAACCCTCATCAACAGATGAAGAGGTACAAGATACACCCTCTATTCCAATCGAACACACC CGGGATCACAAAGGTACCCCCTCCTCCCTATCTCCCAGGTACTACCCCAACCCTAACCACTCACCATGGCAAAAT AGTAAAATGGTACCGGTCAACAACCTACAACGCCCTTGTCCTCGGGCTCTGCAACTTCCTAGCCCCAGGAATCTG GACCGCAATGAACAGTCTCGGCGGCGGCGGGTCCGAAAGTCCTTACCTCGTCGACGCGGCCAACGCACTCACCTT CGGCCTGATGGTCTTCTCCTGTTTCTTCGGAAGCATTGTCGTGCGCATCGTCGGTATAAAGTGGACGCTCATCCT GGGGACAGTCGGATACGCACCATACGCCGCAGGATTATACACCCATAACCGATTCGGGACGGACTGGCTGGTTCT CTTCGGCGCAGCGCTGTGCGGTCTCTCAGCGGGTATATTCTGGATGGCGGAGAGTGCCATTGCCTTATCGTATCC GGAGCCGGAGAATCAGGGACGGTTCCTGGGTTTGTGGTTGAGTTTTCGTGTCGGAGGGCAGATCCTCGGCGGGGC AATTAACCTGGGTTTGAATGTTCACCGGAATACAGCGGGAAGTGTGAGTTATGCTGTCTTTGGGGTGTTTATTGC CTTGCAGGCACTCGGGCCTGCGGCGGGCTTGTTGCTCACTGAGCCGGGGAAGGTGATGAGACGGGATGGGATGAA GGTGAAGTTACGGATTGCGCATAGCGCATGGTACGAAATAAAGGCCATGACGCGGTTGTTCTTCCGGAAGGAGTT CCTGTGTATAGTGCCGCTGATCGCGCAGGCGACGTACACGGAGGCGGTGATGTTCACGTACTTGGATCTGTGGTT CAGTGTGCGGGTGCGGGCGCTGGGCAGTTTCTTGTCGGGTGTGTTGGCGCTGGTGTCTGGCAATGTGTTGGGGGC GTTCTTGGATAGTACGAAGCGGTTTGGGTTGAAGACGAGGAGTCGGGGGGCGTTTTTTGTGGTGTTGGGGTTGCA GGGAGGGTGGTGGATTTGGGCGACGGTTGTGACGACGCAGTATACGAATGAGGGGAGGAGTGGGATTGACTGGGT GGATGAGGGGTTTGCGAAGGGCTTTGTGCTCTATTTGATGTGGGTTGCTGGGTTTCAGTTGAATTATATGTTCCT GTGAGTGCTCCTGCTGACTGGGGGTGGTTGGGATGGGTGTGCTAACTGGGGTTATAGGTACTTTGTGGTTGGCAA TTTGGCGGCTGATGAGGAAGAGGTCGTGCGGATTAGTGGGTTGTTGCGGGGGATGGAGTCGGCTGTGCAGGCTGT TTCGGTAAGTTTCTCGATCTGTTGTGTTGATGGTGGGTGCTGATGAGTGTAGTATGGTTTGAGCAGTGTTGGTAT CATGGCTTCTGTGGGAGGCACCTATCTCAATTTTGGCCTTTGGGGCATCTCGCTGCTGCCGGCGTGGCTTGTGAT TCGCCAGTTTGGCGTAAGCTTGGAGGATCGCAAGTTGGTGAGAGATTACGGACGTGATTAG |