Fungal Genomics

at Utrecht University

General Properties

Protein ID	Ani_SJS72_1\|g6446.t1
Gene name
Location	scaffold_048:99910..100749
Strand	+
Gene length (bp)	839
Transcript length (bp)	669
Coding sequence length (bp)	669
Protein length (aa)	223

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF13460	NAD_binding_10	NAD(P)H-binding	7.7E-36	7	210
PF01370	Epimerase	NAD dependent epimerase/dehydratase family	1.8E-07	3	116

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 12	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Ani_SJS72_1\|g6446.t1 MRVLVIGGSGRCGKLVIDDLLSRGHQVTTLARKPESLGGARAGLKVVQGTPTELEDVRAAFQADIPDVVIVTLNA PRASDSPFAAPISPPRLMTDCNSNVLAAMKEFGVRKTVILQAFGVGESWDNMHCVLRLLMKKSNMSYQYDDHNAT AKAVQASGLDYVMVRPSRLVETPDANQPVKVWPDHGKGVPMMASTSRITVARWLVDAAESNKWDNTAPVITN*
Coding	>Ani_SJS72_1\|g6446.t1 ATGCGCGTTCTTGTGATTGGCGGAAGTGGACGGTGTGGCAAGCTGGTCATCGATGACCTGCTGAGTCGTGGCCAC CAAGTTACGACGTTGGCCCGCAAGCCCGAATCTCTCGGTGGAGCTCGTGCCGGGCTGAAGGTAGTCCAAGGAACC CCCACCGAACTCGAGGATGTCCGCGCCGCGTTCCAAGCCGACATTCCCGATGTGGTAATTGTGACCCTCAACGCC CCACGGGCCAGCGACAGCCCCTTTGCGGCGCCCATCTCACCCCCTCGGCTAATGACTGACTGCAACTCCAACGTG CTGGCGGCGATGAAGGAGTTTGGGGTACGCAAAACGGTCATCCTGCAGGCGTTTGGGGTTGGGGAATCGTGGGAC AACATGCACTGCGTGCTGCGGCTGCTGATGAAGAAGTCCAACATGTCGTATCAGTATGACGATCACAACGCGACG GCCAAGGCGGTGCAGGCGAGTGGACTGGACTATGTGATGGTGCGACCGTCGCGGCTGGTGGAGACGCCCGATGCC AACCAGCCGGTCAAAGTGTGGCCGGATCATGGCAAGGGCGTGCCCATGATGGCCAGCACCAGTCGCATCACGGTG GCCCGCTGGTTGGTGGACGCCGCGGAGAGCAACAAATGGGATAACACGGCACCCGTGATCACCAACTAG
Transcript	>Ani_SJS72_1\|g6446.t1 ATGCGCGTTCTTGTGATTGGCGGAAGTGGACGGTGTGGCAAGCTGGTCATCGATGACCTGCTGAGTCGTGGCCAC CAAGTTACGACGTTGGCCCGCAAGCCCGAATCTCTCGGTGGAGCTCGTGCCGGGCTGAAGGTAGTCCAAGGAACC CCCACCGAACTCGAGGATGTCCGCGCCGCGTTCCAAGCCGACATTCCCGATGTGGTAATTGTGACCCTCAACGCC CCACGGGCCAGCGACAGCCCCTTTGCGGCGCCCATCTCACCCCCTCGGCTAATGACTGACTGCAACTCCAACGTG CTGGCGGCGATGAAGGAGTTTGGGGTACGCAAAACGGTCATCCTGCAGGCGTTTGGGGTTGGGGAATCGTGGGAC AACATGCACTGCGTGCTGCGGCTGCTGATGAAGAAGTCCAACATGTCGTATCAGTATGACGATCACAACGCGACG GCCAAGGCGGTGCAGGCGAGTGGACTGGACTATGTGATGGTGCGACCGTCGCGGCTGGTGGAGACGCCCGATGCC AACCAGCCGGTCAAAGTGTGGCCGGATCATGGCAAGGGCGTGCCCATGATGGCCAGCACCAGTCGCATCACGGTG GCCCGCTGGTTGGTGGACGCCGCGGAGAGCAACAAATGGGATAACACGGCACCCGTGATCACCAACTAG
Gene	>Ani_SJS72_1\|g6446.t1 ATGCGCGTTCTTGTGATTGGCGGAAGTGGACGGTGTGGCAAGCTGGTCATCGATGACCTGCTGAGTCGTGGTAAG TGTCTCTCGCATCAACCTGCATGTCATTGGTTGTATCGGCTAAATTGCTAACAATGAGATCCAGGCCACCAAGTT ACGACGTTGGCCCGCAAGCCCGAATCTCTCGGTGGAGCTCGTGCCGGGCTGAAGGTAGTCCAAGGTGAGTCTTAG TCGTAGTCTTAGTGCCTCTTAGTCCTCGCAGTCCCTCTGGATATGCGCGAAGGAATATCGACTCCAGATTGACTA ACAGAAATCCATCAGGAACCCCCACCGAACTCGAGGATGTCCGCGCCGCGTTCCAAGCCGACATTCCCGATGTGG TAATTGTGACCCTCAACGCCCCACGGGCCAGCGACAGCCCCTTTGCGGCGCCCATCTCACCCCCTCGGCTAATGA CTGACTGCAACTCCAACGTGCTGGCGGCGATGAAGGAGTTTGGGGTACGCAAAACGGTCATCCTGCAGGCGTTTG GGGTTGGGGAATCGTGGGACAACATGCACTGCGTGCTGCGGCTGCTGATGAAGAAGTCCAACATGTCGTATCAGT ATGACGATCACAACGCGACGGCCAAGGCGGTGCAGGCGAGTGGACTGGACTATGTGATGGTGCGACCGTCGCGGC TGGTGGAGACGCCCGATGCCAACCAGCCGGTCAAAGTGTGGCCGGATCATGGCAAGGGCGTGCCCATGATGGCCA GCACCAGTCGCATCACGGTGGCCCGCTGGTTGGTGGACGCCGCGGAGAGCAACAAATGGGATAACACGGCACCCG TGATCACCAACTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail