Fungal Genomics

at Utrecht University

General Properties

Protein ID	Ani_SJS72_1\|g6411.t1
Gene name
Location	scaffold_047:270133..270974
Strand	+
Gene length (bp)	841
Transcript length (bp)	501
Coding sequence length (bp)	501
Protein length (aa)	167

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF05730	CFEM	CFEM domain	7.8E-06	68	125

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 52	0.5

Transmembrane Domains

Domain #	Start	End	Length
1	30	52	22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Ani_SJS72_1\|g6411.t1 MAERGLTPMLARLDSLCSVTFYVHRCFYKMFIPAGRLFTIILLMLTSLAYGSQTTNPTASATSLSGLIPSCAADC IEEFIISDYPKGACSEWDLDCLCRTNTTSGYTLGEAAFRCSLSLCSMKTVFSADFDANRIKSHAKDCNDDDDSDG AIYLQLQFGLQHWVRV*
Coding	>Ani_SJS72_1\|g6411.t1 ATGGCAGAACGTGGTTTGACGCCCATGTTGGCAAGGTTGGATTCCCTCTGTAGCGTCACTTTTTACGTGCATAGA TGCTTTTACAAGATGTTTATACCTGCTGGACGGTTATTCACGATAATACTGTTGATGCTGACAAGTCTCGCCTAT GGTTCCCAGACCACCAATCCTACCGCATCAGCAACATCTTTGTCCGGTCTGATCCCAAGCTGTGCGGCAGACTGC ATCGAAGAATTTATAATCTCCGATTACCCAAAGGGCGCATGCTCGGAGTGGGATCTCGACTGTCTCTGTCGGACG AACACGACAAGCGGCTATACGCTTGGGGAGGCGGCATTTCGCTGTAGCCTTTCCTTATGTTCTATGAAAACAGTC TTCAGCGCCGACTTTGATGCCAACAGGATCAAGTCCCACGCAAAGGACTGCAACGACGACGACGACAGCGACGGT GCCATCTACCTCCAGCTCCAGTTCGGCCTCCAACACTGGGTCCGGGTCTAG
Transcript	>Ani_SJS72_1\|g6411.t1 ATGGCAGAACGTGGTTTGACGCCCATGTTGGCAAGGTTGGATTCCCTCTGTAGCGTCACTTTTTACGTGCATAGA TGCTTTTACAAGATGTTTATACCTGCTGGACGGTTATTCACGATAATACTGTTGATGCTGACAAGTCTCGCCTAT GGTTCCCAGACCACCAATCCTACCGCATCAGCAACATCTTTGTCCGGTCTGATCCCAAGCTGTGCGGCAGACTGC ATCGAAGAATTTATAATCTCCGATTACCCAAAGGGCGCATGCTCGGAGTGGGATCTCGACTGTCTCTGTCGGACG AACACGACAAGCGGCTATACGCTTGGGGAGGCGGCATTTCGCTGTAGCCTTTCCTTATGTTCTATGAAAACAGTC TTCAGCGCCGACTTTGATGCCAACAGGATCAAGTCCCACGCAAAGGACTGCAACGACGACGACGACAGCGACGGT GCCATCTACCTCCAGCTCCAGTTCGGCCTCCAACACTGGGTCCGGGTCTAG
Gene	>Ani_SJS72_1\|g6411.t1 ATGGCAGAACGTGGTTTGACGCCCATGTTGGCAGTATGCGGTACATCGTGCTGGTCCCTGAAGTCGCTCCTTCCC CCCTTATCGCAGCCGCTTCTGTCTTGAAGTTGGTGCTTCTCCATGCTGTTTGGAAACCATCGCTTCTCCAGATCC TCAGTGTTCTTTGCACTCTTTCTTCCTTGATCATCTTAGGATGATATCCTACGATTATCAATGACTCCAGAGGTT GGATTCCCTCTGTAGCGTCACTTTTTACGTGCATAGGTAAGGTATCGACCCTGTGACCTCCCGTTCGCGACTCCT TGGCTTGCATTATACCTGGCGGTGATAGTCTACTAACCCGAAAACGAAGATGCTTTTACAAGATGTTTATACCTG CTGGACGGTTATTCACGATAATACTGTTGATGCTGACAAGTCTCGCCTATGGTTCCCAGACCACCAATCCTACCG CATCAGCAACATCTTTGTCCGGTCTGATCCCAAGCTGTGCGGCAGACTGCATCGAAGAATTTATAATCTCCGATT ACCCAAAGGGCGCATGCTCGGAGTGGGATCTCGACTGTCTCTGTCGGACGAACACGACAAGCGGCTATACGCTTG GGGAGGCGGCATTTCGCTGTAGCCTTTCCTTATGTTCTATGAAAACAGTCTTCAGCGCCGACTTGTACGACATTT GCGACTCGGTACCTGGAGCTTTGCCACGGACTCATGCTACGATCACCGCGACAGTGATGCCAACAGGATCAAGTC CCACGCAAAGGACTGCAACGACGACGACGACAGCGACGGTGCCATCTACCTCCAGCTCCAGTTCGGCCTCCAACA CTGGGTCCGGGTCTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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