© 2022 - Robin Ohm - Utrecht University - The Netherlands
Built with Python Django and Wagtail
| Protein ID | Ani_SJS72_1|g6367.t1 |
| Gene name | |
| Location | scaffold_047:120643..122463 |
| Strand | - |
| Gene length (bp) | 1820 |
| Transcript length (bp) | 1605 |
| Coding sequence length (bp) | 1605 |
| Protein length (aa) | 535 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00083 | Sugar_tr | Sugar (and other) transporter | 1.9E-92 | 27 | 498 |
| PF07690 | MFS_1 | Major Facilitator Superfamily | 2.1E-22 | 31 | 367 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0055085 | transmembrane transport | Yes |
| GO:0016021 | integral component of membrane | Yes |
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0009987 | cellular process | No |
| GO:0110165 | cellular anatomical entity | No |
| GO:0005215 | transporter activity | No |
| GO:0005575 | cellular_component | No |
| GO:0031224 | intrinsic component of membrane | No |
| GO:0003674 | molecular_function | No |
| GO:0006810 | transport | No |
| GO:0008150 | biological_process | No |
| GO:0051234 | establishment of localization | No |
| GO:0051179 | localization | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 39 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 19 | 36 | 17 |
| 2 | 72 | 93 | 21 |
| 3 | 100 | 117 | 17 |
| 4 | 127 | 149 | 22 |
| 5 | 156 | 178 | 22 |
| 6 | 193 | 215 | 22 |
| 7 | 287 | 309 | 22 |
| 8 | 324 | 346 | 22 |
| 9 | 355 | 377 | 22 |
| 10 | 397 | 419 | 22 |
| 11 | 431 | 453 | 22 |
| 12 | 463 | 482 | 19 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS72_1|g6367.t1 MGLITETRKAIQDAPKGMFNAYVLMCTCVFAFAGVAKGFDEGNIASLVTQPHFKAKFGIDHLSEEDYADTKGWIV SITTAGAVFGCLGCPRINDRLGRRWTFRLSTLIYIAGILGQGLCNGNLSGLYASRFIAGLGLGVLTIVPPIYISE IAPKTIRGLLTLQHAACQQLGVVFGFFINYGVTKSYPGGDKQWMLPTLLQLLPATIWLVGSFLCCESPRWLLYKG KRHEAATNLVKLRHLPLDHPIIVAELAGMDAQLLLETESVGEATIWELLKETLTPIENRRRFFLIFMANLFSQWS GANAITQYSPTIFGYLGISGEESTFLATGIYGVVKFASTLAFALFIVDFIGRRRSLITGICLQIVTLVYVGAYLG ATKDMTSTQIRNTPSAAHASTAAIVAIYIHAVAWSIGWFGIPYLIGSEIFPIRIRSLNVSISMAFHWAFYFGCSR AMPSLLAATHRWGAFLFFGCICLSGLVYVFFAMPDTTGRSLEALDSLFQRPWYTVYRVAYPSSEAVQVEREDAKL GDAEHVERA* |
| Coding | >Ani_SJS72_1|g6367.t1 ATGGGTCTTATCACTGAGACGAGGAAGGCAATTCAGGATGCTCCGAAGGGCATGTTCAATGCTTATGTGTTGATG TGTACGTGTGTTTTTGCTTTCGCTGGTGTTGCGAAGGGGTTTGATGAAGGAAATATTGCATCGCTTGTTACTCAG CCGCATTTCAAGGCGAAGTTTGGCATTGATCATCTGTCGGAAGAGGACTATGCGGATACAAAGGGGTGGATTGTC TCTATTACCACTGCAGGTGCTGTTTTTGGATGTCTTGGTTGTCCTCGAATCAACGACCGACTCGGACGACGATGG ACCTTTCGTCTTTCGACGCTCATCTATATCGCAGGGATTCTCGGGCAAGGACTATGCAATGGGAATCTTTCGGGG CTTTATGCTTCGAGGTTTATTGCGGGATTGGGGTTGGGTGTGCTTACTATTGTGCCGCCTATCTATATTTCAGAG ATCGCACCAAAAACAATTAGAGGTCTTCTCACACTGCAACATGCTGCCTGTCAACAGTTAGGTGTCGTATTCGGC TTCTTCATCAACTACGGGGTGACTAAAAGCTACCCTGGCGGTGATAAACAGTGGATGCTCCCTACCCTACTACAG CTTCTCCCCGCCACCATATGGCTAGTAGGATCCTTCCTCTGCTGCGAATCACCGCGGTGGCTACTATATAAAGGC AAAAGGCACGAAGCAGCCACTAACTTAGTCAAACTGCGCCATCTACCCCTCGACCATCCCATAATAGTAGCCGAG CTAGCAGGCATGGACGCCCAACTCCTTCTCGAGACCGAATCAGTCGGCGAAGCCACCATATGGGAGCTCCTGAAA GAGACACTCACCCCAATTGAGAACCGACGTCGCTTCTTCCTCATCTTCATGGCAAACCTCTTCTCCCAATGGTCC GGAGCCAACGCCATCACGCAATACTCACCCACTATCTTCGGCTACCTCGGCATATCTGGTGAAGAGTCAACCTTC CTAGCAACGGGAATCTACGGCGTGGTCAAATTCGCCAGTACTCTCGCGTTTGCCCTGTTCATCGTTGACTTCATC GGCCGTCGTCGATCACTAATAACAGGCATCTGCCTACAAATCGTCACATTAGTCTATGTTGGAGCGTACCTCGGC GCTACAAAGGACATGACCTCAACCCAGATCAGAAATACACCCAGTGCCGCGCACGCCTCGACGGCAGCTATAGTG GCTATTTACATCCACGCTGTGGCGTGGAGTATCGGGTGGTTCGGCATTCCGTATCTTATCGGGTCAGAGATTTTC CCCATTAGGATCCGGTCGCTGAATGTGTCCATCTCGATGGCGTTCCATTGGGCATTCTATTTTGGGTGTTCGAGG GCCATGCCGAGTTTGTTGGCTGCTACGCATCGGTGGGGTGCGTTTCTGTTCTTTGGCTGTATCTGTCTGAGTGGG CTGGTGTATGTGTTTTTTGCTATGCCGGATACGACTGGACGGTCGCTGGAGGCGCTGGATAGTCTGTTTCAGCGT CCTTGGTATACGGTGTATCGGGTTGCTTATCCGTCTAGTGAAGCTGTTCAGGTGGAGAGGGAGGATGCGAAGTTG GGGGATGCTGAGCATGTTGAGAGGGCGTGA |
| Transcript | >Ani_SJS72_1|g6367.t1 ATGGGTCTTATCACTGAGACGAGGAAGGCAATTCAGGATGCTCCGAAGGGCATGTTCAATGCTTATGTGTTGATG TGTACGTGTGTTTTTGCTTTCGCTGGTGTTGCGAAGGGGTTTGATGAAGGAAATATTGCATCGCTTGTTACTCAG CCGCATTTCAAGGCGAAGTTTGGCATTGATCATCTGTCGGAAGAGGACTATGCGGATACAAAGGGGTGGATTGTC TCTATTACCACTGCAGGTGCTGTTTTTGGATGTCTTGGTTGTCCTCGAATCAACGACCGACTCGGACGACGATGG ACCTTTCGTCTTTCGACGCTCATCTATATCGCAGGGATTCTCGGGCAAGGACTATGCAATGGGAATCTTTCGGGG CTTTATGCTTCGAGGTTTATTGCGGGATTGGGGTTGGGTGTGCTTACTATTGTGCCGCCTATCTATATTTCAGAG ATCGCACCAAAAACAATTAGAGGTCTTCTCACACTGCAACATGCTGCCTGTCAACAGTTAGGTGTCGTATTCGGC TTCTTCATCAACTACGGGGTGACTAAAAGCTACCCTGGCGGTGATAAACAGTGGATGCTCCCTACCCTACTACAG CTTCTCCCCGCCACCATATGGCTAGTAGGATCCTTCCTCTGCTGCGAATCACCGCGGTGGCTACTATATAAAGGC AAAAGGCACGAAGCAGCCACTAACTTAGTCAAACTGCGCCATCTACCCCTCGACCATCCCATAATAGTAGCCGAG CTAGCAGGCATGGACGCCCAACTCCTTCTCGAGACCGAATCAGTCGGCGAAGCCACCATATGGGAGCTCCTGAAA GAGACACTCACCCCAATTGAGAACCGACGTCGCTTCTTCCTCATCTTCATGGCAAACCTCTTCTCCCAATGGTCC GGAGCCAACGCCATCACGCAATACTCACCCACTATCTTCGGCTACCTCGGCATATCTGGTGAAGAGTCAACCTTC CTAGCAACGGGAATCTACGGCGTGGTCAAATTCGCCAGTACTCTCGCGTTTGCCCTGTTCATCGTTGACTTCATC GGCCGTCGTCGATCACTAATAACAGGCATCTGCCTACAAATCGTCACATTAGTCTATGTTGGAGCGTACCTCGGC GCTACAAAGGACATGACCTCAACCCAGATCAGAAATACACCCAGTGCCGCGCACGCCTCGACGGCAGCTATAGTG GCTATTTACATCCACGCTGTGGCGTGGAGTATCGGGTGGTTCGGCATTCCGTATCTTATCGGGTCAGAGATTTTC CCCATTAGGATCCGGTCGCTGAATGTGTCCATCTCGATGGCGTTCCATTGGGCATTCTATTTTGGGTGTTCGAGG GCCATGCCGAGTTTGTTGGCTGCTACGCATCGGTGGGGTGCGTTTCTGTTCTTTGGCTGTATCTGTCTGAGTGGG CTGGTGTATGTGTTTTTTGCTATGCCGGATACGACTGGACGGTCGCTGGAGGCGCTGGATAGTCTGTTTCAGCGT CCTTGGTATACGGTGTATCGGGTTGCTTATCCGTCTAGTGAAGCTGTTCAGGTGGAGAGGGAGGATGCGAAGTTG GGGGATGCTGAGCATGTTGAGAGGGCGTGA |
| Gene | >Ani_SJS72_1|g6367.t1 ATGGGTCTTATCACTGAGACGAGGAAGGCAATTCAGGATGCTCCGAAGGGCATGTTCAATGCTTATGTGTTGATG TGTACGTGTGTTTTTGCTTTCGCTGGTGTTGCGAAGGGGTTTGATGAAGGTATTTACATGGACTCACTGAGTGAA GTTAGAATGGCTAATGGATTGTCTGTTGCGGGTAGGAAATATTGCATCGCTTGTTACTCAGCCGCATTTCAAGGC GAAGTTTGGCATTGATCATCTGTCGGAAGAGGACTATGCGGATACAAAGGGGTGGATTGTCTCTATTACCACTGC AGGTGCTGTTTTTGGATGTCTTGGTGTATGTTTGGCTCAATGTTATCTGTGGTCTGGGGCATACTAATGTCAGTG CAGTGTCCTCGAATCAACGACCGACTCGGACGACGATGGACCTTTCGTCTTTCGACGCTCATCTATATCGCAGGG ATTCTCGGGCAAGGACTATGCAATGGGAATCTTTCGGGGCTTTATGCTTCGAGGTTTATTGCGGGATTGGGGTTG GGTGTGCTTACTATTGTGCCGCCTATCTATATTTCAGAGGTATATACTCCAGAGGGATAACATGTGCATTGTACT AACAGATTTAGATCGCACCAAAAACAATTAGAGGTCTTCTCACACTGCAACATGCTGCCTGTCAACAGTTAGGTG TCGTATTCGGCTTCTTCATCAACTACGGGGTGACTAAAAGCTACCCTGGCGGTGATAAACAGTGGATGCTCCCTA CCCTACTACAGCTTCTCCCCGCCACCATATGGCTAGTAGGATCCTTCCTCTGCTGCGAATCACCGCGGTGGCTAC TATATAAAGGCAAAAGGCACGAAGCAGCCACTAACTTAGTCAAACTGCGCCATCTACCCCTCGACCATCCCATAA TAGTAGCCGAGCTAGCAGGCATGGACGCCCAACTCCTTCTCGAGACCGAATCAGTCGGCGAAGCCACCATATGGG AGCTCCTGAAAGAGACACTCACCCCAATTGAGAACCGACGTCGCTTCTTCCTCATCTTCATGGCAAACCTCTTCT CCCAATGGTCCGGAGCCAACGCCATCACGCAATACTCACCCACTATCTTCGGCTACCTCGGCATATCTGGTGAAG AGTCAACCTTCCTAGCAACGGGAATCTACGGCGTGGTCAAATTCGCCAGTACTCTCGCGTTTGCCCTGTTCATCG TTGACTTCATCGGCCGTCGTCGATCACTAATAACAGGCATCTGCCTACAAATCGTCACATTAGTCTATGTTGGAG CGTACCTCGGCGCTACAAAGGACATGACCTCAACCCAGATCAGAAATACACCCAGTGCCGCGCACGCCTCGACGG CAGCTATAGTGGCTATTTACATCCACGCTGTGGCGTGGAGTATCGGGTGGTTCGGCATTCCGTATCTTATCGGGT CAGAGATTTTCCCCATTAGGATCCGGTCGCTGAATGTGTCCATCTCGATGGCGTTCCATTGGGCATTCTATTTTG GGTGTTCGAGGGCCATGCCGAGTTTGTTGGCTGCTACGCATCGGTGGGGTGCGTTTCTGTTCTTTGGCTGTATCT GTCTGAGTGGGCTGGTGTATGTGTTTTTTGCTATGCCGGTGAGTATATTCTGCTTTTTTTGGATGGGCTGGGATG GGACTAACTGGGCATAGGATACGACTGGACGGTCGCTGGAGGCGCTGGATAGTCTGTTTCAGCGTCCTTGGTATA CGGTGTATCGGGTTGCTTATCCGTCTAGTGAAGCTGTTCAGGTGGAGAGGGAGGATGCGAAGTTGGGGGATGCTG AGCATGTTGAGAGGGCGTGA |