© 2022 - Robin Ohm - Utrecht University - The Netherlands
Built with Python Django and Wagtail
| Protein ID | Ani_SJS72_1|g6342.t1 |
| Gene name | |
| Location | scaffold_047:46866..48499 |
| Strand | - |
| Gene length (bp) | 1633 |
| Transcript length (bp) | 1344 |
| Coding sequence length (bp) | 1344 |
| Protein length (aa) | 448 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF07690 | MFS_1 | Major Facilitator Superfamily | 6.9E-25 | 67 | 399 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0055085 | transmembrane transport | Yes |
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0009987 | cellular process | No |
| GO:0005215 | transporter activity | No |
| GO:0003674 | molecular_function | No |
| GO:0006810 | transport | No |
| GO:0008150 | biological_process | No |
| GO:0051234 | establishment of localization | No |
| GO:0051179 | localization | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 59 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 62 | 81 | 19 |
| 2 | 96 | 113 | 17 |
| 3 | 126 | 145 | 19 |
| 4 | 150 | 172 | 22 |
| 5 | 184 | 203 | 19 |
| 6 | 213 | 235 | 22 |
| 7 | 256 | 278 | 22 |
| 8 | 293 | 315 | 22 |
| 9 | 322 | 344 | 22 |
| 10 | 348 | 370 | 22 |
| 11 | 382 | 404 | 22 |
| 12 | 414 | 436 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS72_1|g6342.t1 MTDNGRVEAYPDAVTEFDEKTINNETIKEKKWGILSKSQSVASWKDPGPPPDGGVLAWTQVLVGHLIIMNTWGYM NSFGIFQTYYVDFLNRSDSDVSWIGSVQVFIVFFIGTFTGRLTDAGHFRPVFVVGTILSVLGMFMASISTEYYQV FLAQGICCGIGNGCLFCPALSVTSTYFAKRKMLAVGICACGSATGGLIFTVMFQHLIPQIGYGWTMRVFGFFTLA CLIICNILARPRVPPRKTGPLIELAAFKEPSYTLFAVGIFLTFWGVYFAFYYLSSFGVAIIKISQEESLTFTLIL NGLGIIGRPVPAYLADRYTGPMNILIVVTLFSIICAFAMIGVTSISGLYAWTVVYGIVGNGLQGMFPATLSSLTT DLQKAGVRMGMIFTIVSFAVLTGPPIAGVLITRDNGRYVYAQLFAACSMLVGFCLLCAARLARTGKVLKYKI* |
| Coding | >Ani_SJS72_1|g6342.t1 ATGACCGACAATGGCAGGGTCGAAGCATACCCAGATGCAGTAACCGAGTTCGACGAAAAGACAATAAACAATGAG ACCATCAAGGAAAAGAAATGGGGAATCCTGTCAAAATCACAAAGCGTCGCGAGTTGGAAAGATCCCGGTCCCCCT CCAGATGGCGGAGTTCTCGCATGGACACAGGTCCTAGTGGGACACTTGATCATCATGAATACCTGGGGCTACATG AATTCGTTTGGTATCTTTCAGACTTATTACGTCGATTTTCTCAATCGCTCGGATTCGGATGTTTCATGGATTGGA AGCGTTCAGGTCTTTATTGTCTTCTTTATTGGTACTTTTACTGGGAGGCTTACAGATGCGGGCCACTTTCGGCCG GTTTTTGTTGTCGGAACCATCCTCAGTGTCCTCGGCATGTTCATGGCCTCCATATCAACAGAGTATTACCAAGTA TTCCTCGCCCAAGGAATCTGCTGCGGTATCGGCAACGGATGTCTATTCTGTCCAGCGCTGTCAGTAACTTCCACC TACTTCGCGAAACGCAAGATGCTCGCCGTCGGCATCTGCGCATGCGGCAGCGCCACAGGCGGCCTAATCTTCACA GTAATGTTCCAGCACCTGATCCCACAGATTGGCTACGGATGGACGATGCGAGTCTTCGGCTTCTTCACCCTAGCC TGTCTAATCATCTGCAACATTCTAGCCAGACCGAGAGTGCCCCCTCGGAAAACCGGCCCTCTTATTGAACTCGCT GCTTTCAAGGAACCATCATACACCTTGTTTGCGGTCGGCATCTTCTTGACTTTCTGGGGTGTTTATTTCGCTTTT TATTATCTGAGCTCGTTCGGTGTTGCCATCATCAAGATCTCTCAGGAAGAATCGCTTACTTTCACGCTTATCTTG AATGGTCTGGGTATCATTGGTCGTCCGGTCCCTGCCTACCTGGCTGATCGGTATACCGGTCCGATGAATATTCTC ATTGTCGTCACTCTGTTCTCCATCATTTGCGCTTTTGCCATGATTGGTGTCACTTCTATATCGGGGCTCTATGCA TGGACTGTGGTCTATGGTATTGTGGGAAATGGTTTGCAGGGAATGTTTCCCGCTACGTTGAGCAGCTTGACGACT GATTTGCAGAAAGCGGGTGTCAGGATGGGAATGATTTTCACTATCGTCAGTTTCGCTGTATTGACAGGTCCACCT ATCGCTGGTGTCTTGATCACCAGAGACAATGGCCGCTATGTATATGCGCAGCTCTTCGCGGCGTGCTCGATGCTC GTCGGCTTTTGTCTGCTCTGTGCGGCTAGATTGGCGAGGACTGGAAAGGTCTTGAAGTATAAGATTTAG |
| Transcript | >Ani_SJS72_1|g6342.t1 ATGACCGACAATGGCAGGGTCGAAGCATACCCAGATGCAGTAACCGAGTTCGACGAAAAGACAATAAACAATGAG ACCATCAAGGAAAAGAAATGGGGAATCCTGTCAAAATCACAAAGCGTCGCGAGTTGGAAAGATCCCGGTCCCCCT CCAGATGGCGGAGTTCTCGCATGGACACAGGTCCTAGTGGGACACTTGATCATCATGAATACCTGGGGCTACATG AATTCGTTTGGTATCTTTCAGACTTATTACGTCGATTTTCTCAATCGCTCGGATTCGGATGTTTCATGGATTGGA AGCGTTCAGGTCTTTATTGTCTTCTTTATTGGTACTTTTACTGGGAGGCTTACAGATGCGGGCCACTTTCGGCCG GTTTTTGTTGTCGGAACCATCCTCAGTGTCCTCGGCATGTTCATGGCCTCCATATCAACAGAGTATTACCAAGTA TTCCTCGCCCAAGGAATCTGCTGCGGTATCGGCAACGGATGTCTATTCTGTCCAGCGCTGTCAGTAACTTCCACC TACTTCGCGAAACGCAAGATGCTCGCCGTCGGCATCTGCGCATGCGGCAGCGCCACAGGCGGCCTAATCTTCACA GTAATGTTCCAGCACCTGATCCCACAGATTGGCTACGGATGGACGATGCGAGTCTTCGGCTTCTTCACCCTAGCC TGTCTAATCATCTGCAACATTCTAGCCAGACCGAGAGTGCCCCCTCGGAAAACCGGCCCTCTTATTGAACTCGCT GCTTTCAAGGAACCATCATACACCTTGTTTGCGGTCGGCATCTTCTTGACTTTCTGGGGTGTTTATTTCGCTTTT TATTATCTGAGCTCGTTCGGTGTTGCCATCATCAAGATCTCTCAGGAAGAATCGCTTACTTTCACGCTTATCTTG AATGGTCTGGGTATCATTGGTCGTCCGGTCCCTGCCTACCTGGCTGATCGGTATACCGGTCCGATGAATATTCTC ATTGTCGTCACTCTGTTCTCCATCATTTGCGCTTTTGCCATGATTGGTGTCACTTCTATATCGGGGCTCTATGCA TGGACTGTGGTCTATGGTATTGTGGGAAATGGTTTGCAGGGAATGTTTCCCGCTACGTTGAGCAGCTTGACGACT GATTTGCAGAAAGCGGGTGTCAGGATGGGAATGATTTTCACTATCGTCAGTTTCGCTGTATTGACAGGTCCACCT ATCGCTGGTGTCTTGATCACCAGAGACAATGGCCGCTATGTATATGCGCAGCTCTTCGCGGCGTGCTCGATGCTC GTCGGCTTTTGTCTGCTCTGTGCGGCTAGATTGGCGAGGACTGGAAAGGTCTTGAAGTATAAGATTTAG |
| Gene | >Ani_SJS72_1|g6342.t1 ATGACCGACAATGGCAGGGTCGAAGCATACCCAGATGCAGTAACCGAGTTCGACGAAAAGACAATAAACAATGAG ACCATCAAGGAAAAGAAATGGGGAATCCTGTCAAAATCACAAAGCGTCGCGAGTTGGAAAGATCCCGGTCCCCCT CCAGATGGCGGAGTTCTCGCATGGACACAGGTCCTAGTGGGACACTTGATCATCATGAATACCTGGTAGGTTCCA ATGCTTTGCTTTCGCACTTGTCAAAGCTCAGGTGGTTCCTCCAGGAGTGTGGTTACACTTTGCGCTGGCCCAATT GTGAAAAGTATGCTGAAATAGGGCCAGGGGCTACATGAATTCGTTTGGTATCTTTCAGACTTATTACGTCGATTT TCTCAATCGCTCGGATTCGGATGTTTCATGGATTGGAAGCGTTCAGGTCTTTATTGTCTTCTTTATTGGTACTTT TACTGGGAGGCTTACAGATGCGGGCCACTTTCGGCCGGTTTTTGGTGAGTTTTCTTGTCTACTTTGCACAGTCTT CAGAGATACGTCTCAGTGCTTTAACTTACAGATTATTTCAATCCCCGCTATTGAAGAAATATGCTAATTACTGTA CTGTAGTTGTCGGAACCATCCTCAGTGTCCTCGGCATGTTCATGGCCTCCATATCAACAGAGTATTACCAAGTAT TCCTCGCCCAAGGAATCTGCTGCGGTATCGGCAACGGATGTCTATTCTGTCCAGCGCTGTCAGTAACTTCCACCT ACTTCGCGAAACGCAAGATGCTCGCCGTCGGCATCTGCGCATGCGGCAGCGCCACAGGCGGCCTAATCTTCACAG TAATGTTCCAGCACCTGATCCCACAGATTGGCTACGGATGGACGATGCGAGTCTTCGGCTTCTTCACCCTAGCCT GTCTAATCATCTGCAACATTCTAGCCAGACCGAGAGTGCCCCCTCGGAAAACCGGCCCTCTTATTGAACTCGCTG CTTTCAAGGAACCATCATACACCTTGTTTGCGGTCGGCATCTTCTTGACTTTCTGGGGTGTTTATTTCGCTTTTT ATTATCTGAGCTCGTTCGGTGTTGCCATCATCAAGATCTCTCAGGAAGAATCGCTTACTTTCACGCTTATCTTGA ATGGTCTGGGTATCATTGGTCGTCCGGTCCCTGCCTACCTGGCTGATCGGTATACCGGTCCGATGAATATTCTCA TTGTCGTCACTCTGTTCTCCATCATTTGCGCTTTTGCCATGATTGGTGTCACTTCTATATCGGGGCTCTATGCAT GGACTGTGGTCTATGGTATTGTGGGAAATGGTTTGCAGGGAATGTTTCCCGCTACGTTGAGCAGCTTGACGACTG ATTTGCAGAAAGCGGGTGTCAGGATGGGAATGATTTTCGTGAGTTCTCCGTCCTCCCAAGTTGCTGTGGGAAAGA GTGAGCTTCATGACTAATTTGGGTATAGACTATCGTCAGTTTCGCTGTATTGACAGGTCCACCTATCGCTGGTGT CTTGATCACCAGAGACAATGGCCGCTATGTATATGCGCAGCTCTTCGCGGCGTGCTCGATGCTCGTCGGCTTTTG TCTGCTCTGTGCGGCTAGATTGGCGAGGACTGGAAAGGTCTTGAAGTATAAGATTTAG |