Fungal Genomics

at Utrecht University

General Properties

Protein IDAni_SJS72_1|g6340.t1
Gene name
Locationscaffold_047:34904..36116
Strand-
Gene length (bp)1212
Transcript length (bp)927
Coding sequence length (bp)927
Protein length (aa) 309

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00804 Syntaxin Syntaxin 1.3E-11 98 240
PF05739 SNARE SNARE domain 3.3E-11 244 294

GO

GO Term Description Terminal node
GO:0016020 membrane Yes
GO:0110165 cellular anatomical entity No
GO:0005575 cellular_component No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 57 0.45

Transmembrane Domains

Domain # Start End Length
1 280 302 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ani_SJS72_1|g6340.t1
MSYGGNQGGYGQYNPYGQQDANPYSDANAMEQGNGSYEMGSYNQPADATTLLNKCREINDGIADLRAKREGQLAA
AQNALLDSSTGKEDQVARQTLDYIEDEVNNGFRYLRDLLKKVKQTPGSGDSRVQTQIDVTSRNLRREIEQYQRCQ
SDFQKRLREQVRRRYEIANPEASPEEIEQGVDNVLLGQEQSFQVTGSRTRQANDARQAALERSAAIRKIEQDMME
LGRLYQEVAELVHQQEPAVEQINQDADNVAQNVSNANNQITEAIASARRARKWKWYALLVVILIIAIVVGVAVGV
TEANKSSK*
Coding >Ani_SJS72_1|g6340.t1
ATGAGTTACGGTGGAAACCAGGGTGGCTACGGCCAGTACAACCCCTATGGCCAGCAAGATGCCAACCCCTACAGC
GACGCCAATGCCATGGAGCAGGGCAACGGTAGCTACGAAATGGGCTCTTACAACCAGCCTGCGGACGCGACGACG
CTGCTGAACAAGTGCAGAGAGATCAACGACGGTATTGCGGATCTCCGCGCCAAGCGCGAGGGCCAGCTTGCGGCC
GCCCAGAACGCCTTGCTCGATTCGAGTACCGGAAAGGAGGACCAGGTCGCTCGCCAGACTCTGGACTACATTGAG
GATGAAGTGAACAACGGATTCCGTTACCTCCGCGATCTTCTGAAGAAGGTCAAGCAGACCCCCGGCTCCGGAGAC
AGCCGTGTGCAGACCCAGATCGACGTCACTAGCCGGAACCTCCGTCGAGAGATCGAACAGTACCAGAGATGCCAG
TCCGACTTCCAGAAGCGCCTGCGGGAGCAGGTTCGCAGACGTTATGAGATCGCCAACCCCGAAGCTTCCCCCGAG
GAGATCGAGCAGGGTGTTGACAATGTCTTGTTGGGCCAGGAGCAGAGCTTCCAGGTTACTGGTAGCCGGACTAGA
CAGGCCAACGACGCCAGGCAGGCCGCTTTGGAGCGATCGGCCGCCATTCGCAAGATCGAGCAGGATATGATGGAG
CTTGGCCGCCTGTACCAGGAAGTGGCGGAGCTTGTCCACCAGCAGGAGCCTGCTGTGGAGCAGATCAACCAGGAT
GCAGACAATGTTGCGCAGAACGTTTCGAACGCGAACAACCAGATCACGGAAGCTATCGCCAGCGCTCGTCGGGCG
AGAAAGTGGAAGTGGTATGCTCTGCTTGTCGTCATCCTCATCATCGCCATCGTCGTCGGTGTTGCTGTCGGTGTC
ACGGAAGCCAACAAGTCCTCGAAATAG
Transcript >Ani_SJS72_1|g6340.t1
ATGAGTTACGGTGGAAACCAGGGTGGCTACGGCCAGTACAACCCCTATGGCCAGCAAGATGCCAACCCCTACAGC
GACGCCAATGCCATGGAGCAGGGCAACGGTAGCTACGAAATGGGCTCTTACAACCAGCCTGCGGACGCGACGACG
CTGCTGAACAAGTGCAGAGAGATCAACGACGGTATTGCGGATCTCCGCGCCAAGCGCGAGGGCCAGCTTGCGGCC
GCCCAGAACGCCTTGCTCGATTCGAGTACCGGAAAGGAGGACCAGGTCGCTCGCCAGACTCTGGACTACATTGAG
GATGAAGTGAACAACGGATTCCGTTACCTCCGCGATCTTCTGAAGAAGGTCAAGCAGACCCCCGGCTCCGGAGAC
AGCCGTGTGCAGACCCAGATCGACGTCACTAGCCGGAACCTCCGTCGAGAGATCGAACAGTACCAGAGATGCCAG
TCCGACTTCCAGAAGCGCCTGCGGGAGCAGGTTCGCAGACGTTATGAGATCGCCAACCCCGAAGCTTCCCCCGAG
GAGATCGAGCAGGGTGTTGACAATGTCTTGTTGGGCCAGGAGCAGAGCTTCCAGGTTACTGGTAGCCGGACTAGA
CAGGCCAACGACGCCAGGCAGGCCGCTTTGGAGCGATCGGCCGCCATTCGCAAGATCGAGCAGGATATGATGGAG
CTTGGCCGCCTGTACCAGGAAGTGGCGGAGCTTGTCCACCAGCAGGAGCCTGCTGTGGAGCAGATCAACCAGGAT
GCAGACAATGTTGCGCAGAACGTTTCGAACGCGAACAACCAGATCACGGAAGCTATCGCCAGCGCTCGTCGGGCG
AGAAAGTGGAAGTGGTATGCTCTGCTTGTCGTCATCCTCATCATCGCCATCGTCGTCGGTGTTGCTGTCGGTGTC
ACGGAAGCCAACAAGTCCTCGAAATAG
Gene >Ani_SJS72_1|g6340.t1
ATGAGTGTATGTCGAGACCCAGAACGTCATTATCTTGACCCTCTCCGCTACCCCACCCCTTATTATTCACCACCT
GCGCATCGTCAAATAGCCTGCTAACTCGCCGATTTTCTAGTACGGTGGAAACCAGGGTGGCTACGGCCAGTACAA
CCCCTATGGCCAGCAAGATGCCAACCCCTACAGCGACGCCAATGCCATGGAGCAGGGCAACGGTAGCTACGGTAA
GCGCACCATGTCCAGTACCCTCCCAGCCTGACCCGACGATTGCCTAACATGCGTTCGCATATCAGAAATGGGCTC
TTACAACCAGCCTGCGGACGCGACGACGCTGCTGAACAAGTGCAGAGAGATCAACGACGGTATTGCGGATCTCCG
CGCCAAGCGCGAGGGCCAGCTTGCGGCCGCCCAGAACGCCTTGCTCGATTCGAGTACCGGAAAGGAGGACCAGGT
CGCTCGCCAGACTCTGGACTACATTGAGGATGAAGTGAACAACGGATTCCGTTACCTCCGCGATCTTCTGAAGAA
GGTCAAGCAGACCCCCGGCTCCGGAGACAGCCGTGTGCAGACCCAGATCGACGTCACTAGCCGGAACCTCCGTCG
AGAGATCGAACAGTACCAGAGATGCCAGTCCGACTTCCAGAAGCGCCTGCGGGAGCAGGTTCGCAGACGTTATGA
GATCGCCAACCCCGAAGCTTCCCCCGAGGAGATCGAGCAGGGTGTTGACAATGTCTTGTTGGGCCAGGAGCAGAG
CTTCCAGGTATGCTCTTTCGAGAGATTTCAGAAAGTCCATGCTAACGTTTCGGTTAGGTTACTGGTAGCCGGACT
AGACAGGCCAACGACGCCAGGCAGGCCGCTTTGGAGCGATCGGCCGCCATTCGCAAGATCGAGCAGGATATGATG
GAGCTTGGCCGCCTGTACCAGGAAGTGGCGGAGCTTGTCCACCAGCAGGAGCCTGCTGTGGAGCAGATCAACCAG
GATGCAGACAATGTTGCGCAGAACGTTTCGAACGCGAACAACCAGATCACGGAAGCTATCGCCAGCGCTCGTCGG
GCGAGAAAGTGGAAGTGGTATGCTCTGCTTGTCGTCAGTAAGTGTCCCCGATGTGAGTACCCACTTAATAGGCCA
GGCTGACAATTATCTTTAGTCCTCATCATCGCCATCGTCGTCGGTGTTGCTGTCGGTGTCACGGAAGCCAACAAG
TCCTCGAAATAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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