Protein ID | Ani_SJS72_1|g6340.t1 |
Gene name | |
Location | scaffold_047:34904..36116 |
Strand | - |
Gene length (bp) | 1212 |
Transcript length (bp) | 927 |
Coding sequence length (bp) | 927 |
Protein length (aa) | 309 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF00804 | Syntaxin | Syntaxin | 1.3E-11 | 98 | 240 |
PF05739 | SNARE | SNARE domain | 3.3E-11 | 244 | 294 |
GO Term | Description | Terminal node |
---|---|---|
GO:0016020 | membrane | Yes |
GO:0110165 | cellular anatomical entity | No |
GO:0005575 | cellular_component | No |
Domain # | Start | End | Length |
---|---|---|---|
1 | 280 | 302 | 22 |
Orthofinder run ID | 3 |
Orthogroup | 4273 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS72_1|g6340.t1 MSYGGNQGGYGQYNPYGQQDANPYSDANAMEQGNGSYEMGSYNQPADATTLLNKCREINDGIADLRAKREGQLAA AQNALLDSSTGKEDQVARQTLDYIEDEVNNGFRYLRDLLKKVKQTPGSGDSRVQTQIDVTSRNLRREIEQYQRCQ SDFQKRLREQVRRRYEIANPEASPEEIEQGVDNVLLGQEQSFQVTGSRTRQANDARQAALERSAAIRKIEQDMME LGRLYQEVAELVHQQEPAVEQINQDADNVAQNVSNANNQITEAIASARRARKWKWYALLVVILIIAIVVGVAVGV TEANKSSK* |
Coding | >Ani_SJS72_1|g6340.t1 ATGAGTTACGGTGGAAACCAGGGTGGCTACGGCCAGTACAACCCCTATGGCCAGCAAGATGCCAACCCCTACAGC GACGCCAATGCCATGGAGCAGGGCAACGGTAGCTACGAAATGGGCTCTTACAACCAGCCTGCGGACGCGACGACG CTGCTGAACAAGTGCAGAGAGATCAACGACGGTATTGCGGATCTCCGCGCCAAGCGCGAGGGCCAGCTTGCGGCC GCCCAGAACGCCTTGCTCGATTCGAGTACCGGAAAGGAGGACCAGGTCGCTCGCCAGACTCTGGACTACATTGAG GATGAAGTGAACAACGGATTCCGTTACCTCCGCGATCTTCTGAAGAAGGTCAAGCAGACCCCCGGCTCCGGAGAC AGCCGTGTGCAGACCCAGATCGACGTCACTAGCCGGAACCTCCGTCGAGAGATCGAACAGTACCAGAGATGCCAG TCCGACTTCCAGAAGCGCCTGCGGGAGCAGGTTCGCAGACGTTATGAGATCGCCAACCCCGAAGCTTCCCCCGAG GAGATCGAGCAGGGTGTTGACAATGTCTTGTTGGGCCAGGAGCAGAGCTTCCAGGTTACTGGTAGCCGGACTAGA CAGGCCAACGACGCCAGGCAGGCCGCTTTGGAGCGATCGGCCGCCATTCGCAAGATCGAGCAGGATATGATGGAG CTTGGCCGCCTGTACCAGGAAGTGGCGGAGCTTGTCCACCAGCAGGAGCCTGCTGTGGAGCAGATCAACCAGGAT GCAGACAATGTTGCGCAGAACGTTTCGAACGCGAACAACCAGATCACGGAAGCTATCGCCAGCGCTCGTCGGGCG AGAAAGTGGAAGTGGTATGCTCTGCTTGTCGTCATCCTCATCATCGCCATCGTCGTCGGTGTTGCTGTCGGTGTC ACGGAAGCCAACAAGTCCTCGAAATAG |
Transcript | >Ani_SJS72_1|g6340.t1 ATGAGTTACGGTGGAAACCAGGGTGGCTACGGCCAGTACAACCCCTATGGCCAGCAAGATGCCAACCCCTACAGC GACGCCAATGCCATGGAGCAGGGCAACGGTAGCTACGAAATGGGCTCTTACAACCAGCCTGCGGACGCGACGACG CTGCTGAACAAGTGCAGAGAGATCAACGACGGTATTGCGGATCTCCGCGCCAAGCGCGAGGGCCAGCTTGCGGCC GCCCAGAACGCCTTGCTCGATTCGAGTACCGGAAAGGAGGACCAGGTCGCTCGCCAGACTCTGGACTACATTGAG GATGAAGTGAACAACGGATTCCGTTACCTCCGCGATCTTCTGAAGAAGGTCAAGCAGACCCCCGGCTCCGGAGAC AGCCGTGTGCAGACCCAGATCGACGTCACTAGCCGGAACCTCCGTCGAGAGATCGAACAGTACCAGAGATGCCAG TCCGACTTCCAGAAGCGCCTGCGGGAGCAGGTTCGCAGACGTTATGAGATCGCCAACCCCGAAGCTTCCCCCGAG GAGATCGAGCAGGGTGTTGACAATGTCTTGTTGGGCCAGGAGCAGAGCTTCCAGGTTACTGGTAGCCGGACTAGA CAGGCCAACGACGCCAGGCAGGCCGCTTTGGAGCGATCGGCCGCCATTCGCAAGATCGAGCAGGATATGATGGAG CTTGGCCGCCTGTACCAGGAAGTGGCGGAGCTTGTCCACCAGCAGGAGCCTGCTGTGGAGCAGATCAACCAGGAT GCAGACAATGTTGCGCAGAACGTTTCGAACGCGAACAACCAGATCACGGAAGCTATCGCCAGCGCTCGTCGGGCG AGAAAGTGGAAGTGGTATGCTCTGCTTGTCGTCATCCTCATCATCGCCATCGTCGTCGGTGTTGCTGTCGGTGTC ACGGAAGCCAACAAGTCCTCGAAATAG |
Gene | >Ani_SJS72_1|g6340.t1 ATGAGTGTATGTCGAGACCCAGAACGTCATTATCTTGACCCTCTCCGCTACCCCACCCCTTATTATTCACCACCT GCGCATCGTCAAATAGCCTGCTAACTCGCCGATTTTCTAGTACGGTGGAAACCAGGGTGGCTACGGCCAGTACAA CCCCTATGGCCAGCAAGATGCCAACCCCTACAGCGACGCCAATGCCATGGAGCAGGGCAACGGTAGCTACGGTAA GCGCACCATGTCCAGTACCCTCCCAGCCTGACCCGACGATTGCCTAACATGCGTTCGCATATCAGAAATGGGCTC TTACAACCAGCCTGCGGACGCGACGACGCTGCTGAACAAGTGCAGAGAGATCAACGACGGTATTGCGGATCTCCG CGCCAAGCGCGAGGGCCAGCTTGCGGCCGCCCAGAACGCCTTGCTCGATTCGAGTACCGGAAAGGAGGACCAGGT CGCTCGCCAGACTCTGGACTACATTGAGGATGAAGTGAACAACGGATTCCGTTACCTCCGCGATCTTCTGAAGAA GGTCAAGCAGACCCCCGGCTCCGGAGACAGCCGTGTGCAGACCCAGATCGACGTCACTAGCCGGAACCTCCGTCG AGAGATCGAACAGTACCAGAGATGCCAGTCCGACTTCCAGAAGCGCCTGCGGGAGCAGGTTCGCAGACGTTATGA GATCGCCAACCCCGAAGCTTCCCCCGAGGAGATCGAGCAGGGTGTTGACAATGTCTTGTTGGGCCAGGAGCAGAG CTTCCAGGTATGCTCTTTCGAGAGATTTCAGAAAGTCCATGCTAACGTTTCGGTTAGGTTACTGGTAGCCGGACT AGACAGGCCAACGACGCCAGGCAGGCCGCTTTGGAGCGATCGGCCGCCATTCGCAAGATCGAGCAGGATATGATG GAGCTTGGCCGCCTGTACCAGGAAGTGGCGGAGCTTGTCCACCAGCAGGAGCCTGCTGTGGAGCAGATCAACCAG GATGCAGACAATGTTGCGCAGAACGTTTCGAACGCGAACAACCAGATCACGGAAGCTATCGCCAGCGCTCGTCGG GCGAGAAAGTGGAAGTGGTATGCTCTGCTTGTCGTCAGTAAGTGTCCCCGATGTGAGTACCCACTTAATAGGCCA GGCTGACAATTATCTTTAGTCCTCATCATCGCCATCGTCGTCGGTGTTGCTGTCGGTGTCACGGAAGCCAACAAG TCCTCGAAATAG |