© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS72_1|g6303.t1 |
| Gene name | |
| Location | scaffold_046:206070..207447 |
| Strand | + |
| Gene length (bp) | 1377 |
| Transcript length (bp) | 879 |
| Coding sequence length (bp) | 879 |
| Protein length (aa) | 293 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF02585 | PIG-L | GlcNAc-PI de-N-acetylase | 1.2E-21 | 62 | 185 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 12 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 21 | 43 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS72_1|g6303.t1 MCEASGMRLLRQVRRHDWRCLMAYSALIIPSAAVFLYLLLAYYLAGDPRLVPHTIQQARNVLLVTAHPDDETLFF SPTILHGRNNPDVTRSLLVLSTGDYHGQGDIRKGEIERSCAALGIPSDRCVVLEHGALQDNPKKWWRQDVIQDIV AHYVHMWKVDLIYTFDDGGVSGHINHRAVSAGVRKYAESFPHAPPVYALQSTFLLRKYSSLIDLILTSVPFSWRI GAAVLTAPPVPTEHDTYGNKALLVSPWQTYLTARTAFSQHDSQYSWDRVLYLVVSRYMWFNNLYRIA* |
| Coding | >Ani_SJS72_1|g6303.t1 ATGTGCGAAGCTTCTGGTATGCGCCTTCTTCGCCAAGTGCGGCGACATGACTGGAGATGTCTGATGGCATATTCA GCGCTGATCATCCCATCGGCTGCCGTCTTTCTGTATCTTCTTCTGGCATACTACCTGGCGGGAGATCCCCGGCTT GTTCCACACACCATCCAGCAAGCGCGGAACGTTCTCCTTGTCACGGCACATCCCGATGACGAGACTCTGTTCTTT AGCCCAACTATTCTTCACGGCCGCAACAACCCGGACGTCACCCGTTCCTTGTTGGTATTATCGACAGGCGACTAT CATGGCCAAGGAGATATCCGCAAAGGGGAGATCGAACGCAGTTGCGCGGCTCTCGGCATCCCCTCCGATCGCTGT GTCGTCCTCGAGCATGGTGCATTACAGGATAACCCAAAGAAGTGGTGGCGCCAGGATGTCATCCAGGATATAGTG GCTCATTACGTTCACATGTGGAAAGTGGATCTAATCTATACTTTCGACGATGGTGGAGTATCCGGCCATATCAAC CATAGGGCCGTCAGTGCCGGAGTTCGGAAATATGCAGAGAGCTTTCCGCATGCCCCGCCGGTCTACGCGCTACAG AGTACATTCCTCCTGCGCAAGTACTCGTCGCTTATTGATCTGATCTTGACATCAGTGCCATTCTCATGGCGCATC GGAGCAGCGGTCTTGACAGCCCCACCGGTGCCCACAGAGCACGATACATATGGAAATAAAGCGCTGCTGGTAAGC CCGTGGCAGACCTATCTTACTGCGCGAACAGCATTCAGTCAGCATGATAGTCAGTACTCGTGGGATCGCGTGCTG TACTTGGTAGTGAGCCGTTATATGTGGTTCAATAATCTATACCGGATAGCCTAA |
| Transcript | >Ani_SJS72_1|g6303.t1 ATGTGCGAAGCTTCTGGTATGCGCCTTCTTCGCCAAGTGCGGCGACATGACTGGAGATGTCTGATGGCATATTCA GCGCTGATCATCCCATCGGCTGCCGTCTTTCTGTATCTTCTTCTGGCATACTACCTGGCGGGAGATCCCCGGCTT GTTCCACACACCATCCAGCAAGCGCGGAACGTTCTCCTTGTCACGGCACATCCCGATGACGAGACTCTGTTCTTT AGCCCAACTATTCTTCACGGCCGCAACAACCCGGACGTCACCCGTTCCTTGTTGGTATTATCGACAGGCGACTAT CATGGCCAAGGAGATATCCGCAAAGGGGAGATCGAACGCAGTTGCGCGGCTCTCGGCATCCCCTCCGATCGCTGT GTCGTCCTCGAGCATGGTGCATTACAGGATAACCCAAAGAAGTGGTGGCGCCAGGATGTCATCCAGGATATAGTG GCTCATTACGTTCACATGTGGAAAGTGGATCTAATCTATACTTTCGACGATGGTGGAGTATCCGGCCATATCAAC CATAGGGCCGTCAGTGCCGGAGTTCGGAAATATGCAGAGAGCTTTCCGCATGCCCCGCCGGTCTACGCGCTACAG AGTACATTCCTCCTGCGCAAGTACTCGTCGCTTATTGATCTGATCTTGACATCAGTGCCATTCTCATGGCGCATC GGAGCAGCGGTCTTGACAGCCCCACCGGTGCCCACAGAGCACGATACATATGGAAATAAAGCGCTGCTGGTAAGC CCGTGGCAGACCTATCTTACTGCGCGAACAGCATTCAGTCAGCATGATAGTCAGTACTCGTGGGATCGCGTGCTG TACTTGGTAGTGAGCCGTTATATGTGGTTCAATAATCTATACCGGATAGCCTAA |
| Gene | >Ani_SJS72_1|g6303.t1 ATGTGCGAAGCTTCTGGTGCGTGTGATTGTGCGAGCTGCGAAACCCCCAAATCTCCGTCACGAGCGGTATTATTA CTGACCATACTTACAACCCGATGTATTTCATAGGTATGTATTACAATACATTACATAGACAACATAGAGTTTGTC CGCGGATCCCGAGACGACTTCGGCCTTCGAGGAACTGATGGTCTTCTTTTGTTCTCTTTTACTGTCGGAACAACT TGCCTCAGGGCTGTGCCGCACACTGAATTGCCGTGCAGGGCTTGATTCCACCCAGCGATAACAGCATCTTGGCAC CACCTCCGTACAAAGAACCTCGACCTCATCGATGGGATCCCCAACCCGCATGCTCAGGCGCCTTCTTCGCCAAGT GCGGCGACATGACTGGAGATGTCTGATGGCATATTCAGCGCTGATCATCCCATCGGCTGCCGTCTTTCTGTATCT TCTTCTGGCATACTACCTGGCGGGAGATCCCCGGCTTGTTCCACACACCATCCAGCAAGCGCGGAACGTTCTCCT TGTCACGGCACATCCCGATGACGAGACTCTGTTCTTTAGCCCAACTATTCTTCACGGCCGCAACAACCCGGACGT CACCCGTTCCTTGTTGGTATTATCGACAGGCGAGTCCTCCCTTCACTTAGAATTTCCGAGGAGTGAATTTTTTAA TGTGATGCAGGCGACTATCATGGCCAAGGAGATATCCGCAAAGGGGAGATCGAACGCAGTTGCGCGGCTCTCGGC ATCCCCTCCGATCGCTGTGTCGTCCTCGAGCATGGTGCATTACAGGATAACCCAAAGAAGTGGTGGCGCCAGGAT GTCATCCAGGATATAGTGGCTCATTACGTTCACATGTGGAAAGTGGATCTAGTAAGTTGCCCCAACACTCTTTCA CGATAGTACACAGGAGCACTAAGACTACAGAAGATCTATACTTTCGACGATGGTGGAGTATCCGGCCATATCAAC CATAGGGCCGTCAGTGCCGGAGTTCGGTACGTCGACCATACATCACCACTGCGAAAAAGTCTGACTGTGAGTAGG AAATATGCAGAGAGCTTTCCGCATGCCCCGCCGGTCTACGCGCTACAGAGTACATTCCTCCTGCGCAAGTACTCG TCGCTTATTGATCTGATCTTGACATCAGTGCCATTCTCATGGCGCATCGGAGCAGCGGTCTTGACAGCCCCACCG GTGCCCACAGAGCACGATACATATGGAAATAAAGCGCTGCTGGTAAGCCCGTGGCAGACCTATCTTACTGCGCGA ACAGCATTCAGTCAGCATGATAGTCAGTACTCGTGGGATCGCGTGCTGTACTTGGTAGTGAGCCGTTATATGTGG TTCAATAATCTATACCGGATAGCCTAA |