© 2022 - Robin Ohm - Utrecht University - The Netherlands
Built with Python Django and Wagtail
| Protein ID | Ani_SJS72_1|g6244.t1 |
| Gene name | |
| Location | scaffold_046:47356..49154 |
| Strand | - |
| Gene length (bp) | 1798 |
| Transcript length (bp) | 1599 |
| Coding sequence length (bp) | 1599 |
| Protein length (aa) | 533 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF13520 | AA_permease_2 | Amino acid permease | 5.6E-56 | 60 | 503 |
| PF00324 | AA_permease | Amino acid permease | 2.0E-30 | 81 | 512 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0055085 | transmembrane transport | Yes |
| GO:0016020 | membrane | Yes |
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0009987 | cellular process | No |
| GO:0110165 | cellular anatomical entity | No |
| GO:0005215 | transporter activity | No |
| GO:0005575 | cellular_component | No |
| GO:0003674 | molecular_function | No |
| GO:0006810 | transport | No |
| GO:0008150 | biological_process | No |
| GO:0051234 | establishment of localization | No |
| GO:0051179 | localization | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 50 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 56 | 78 | 22 |
| 2 | 88 | 110 | 22 |
| 3 | 144 | 166 | 22 |
| 4 | 181 | 203 | 22 |
| 5 | 210 | 232 | 22 |
| 6 | 247 | 269 | 22 |
| 7 | 290 | 312 | 22 |
| 8 | 339 | 361 | 22 |
| 9 | 392 | 410 | 18 |
| 10 | 420 | 442 | 22 |
| 11 | 463 | 482 | 19 |
| 12 | 492 | 514 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS72_1|g6244.t1 MAFTQNTQQDAAKESVVTGSHTVEVDASSQEEGINGTRYDVTEMDRMGKTQQFKRNIQSFAALSFSAVLQSTWEY IMLSDYEGLQDGGLAGMLWTYVWSAIGFGFIIVSISEMASMAPTSGGQYHWVSEFASPRYQKFLSYVTGWMSVLA WQAGTASGSFLTGTIIQGLISVRDPNYDPTGWQGTLFVFAMILIAFFFNIYGAGFMARMQNVLLATHVLCWLVVV VTLWVLAPLQPAEAVFTKFENFGGWSSMGLTVMVGQLAAIYGCLSCDATAHMSEEIKDAGRYVPIAITWSYFANA ILALVVLITMLFATPSVEDSLNDDTGFPFIYVFKQATNTAGVNGLTAIILIPVIISNILFNASTARQTFSFARDR GLPFSNWIAKVDEKRKLPVNSIILSCIISALLSLINIGSETAFNAIVSLNVAALMFSYSISMSCLIWRKIFHPHT LPPARWGLGRYGLAVNIIGWLYVLFALFWSFWPESTPVTTETFNWSVVIFVAVFLVSLVMYVVQGRRHYDGPVTE VKRCEDL* |
| Coding | >Ani_SJS72_1|g6244.t1 ATGGCCTTCACCCAGAACACGCAGCAGGATGCTGCCAAGGAATCCGTAGTTACTGGCTCGCACACTGTAGAAGTC GATGCTTCCAGTCAGGAGGAGGGTATCAATGGCACACGCTACGACGTGACTGAAATGGATCGGATGGGAAAGACC CAGCAGTTCAAGCGAAACATCCAGTCTTTTGCCGCCCTCAGTTTTTCGGCCGTATTGCAGTCTACGTGGGAGTAC ATCATGCTGTCGGACTATGAAGGGTTGCAAGATGGTGGATTGGCAGGTATGCTGTGGACCTATGTCTGGAGCGCC ATTGGATTTGGGTTCATCATCGTCTCTATCTCTGAGATGGCCTCGATGGCGCCTACTTCTGGAGGCCAGTACCAT TGGGTCTCCGAGTTTGCATCTCCCCGCTACCAGAAATTCCTTAGCTACGTGACTGGCTGGATGTCTGTTTTGGCG TGGCAGGCAGGAACCGCATCGGGCTCATTCTTGACTGGAACCATCATCCAGGGCCTGATTAGCGTCCGCGACCCC AACTACGACCCCACCGGATGGCAAGGCACATTGTTTGTGTTTGCGATGATTCTCATTGCGTTCTTCTTCAACATA TACGGTGCGGGATTCATGGCCCGTATGCAAAATGTGCTTCTGGCAACTCACGTCCTCTGCTGGCTGGTTGTTGTG GTGACACTTTGGGTCCTGGCCCCGCTACAGCCTGCTGAAGCAGTCTTCACGAAGTTTGAGAACTTCGGTGGATGG TCATCCATGGGTCTAACTGTGATGGTGGGTCAGCTTGCGGCCATCTATGGCTGTCTCAGTTGCGATGCAACGGCC CACATGTCAGAGGAAATCAAAGATGCAGGCCGTTACGTGCCTATTGCCATCACCTGGTCTTATTTCGCCAACGCT ATCTTAGCACTAGTCGTGCTCATCACAATGCTCTTCGCAACACCATCAGTTGAAGACTCACTCAACGATGACACC GGCTTTCCCTTCATCTACGTTTTCAAACAAGCGACCAACACAGCAGGCGTCAACGGTCTAACTGCCATTATTCTC ATTCCCGTGATAATAAGCAACATACTCTTCAACGCCTCCACTGCACGACAAACATTCTCCTTCGCTCGCGATCGC GGGCTCCCATTCTCCAACTGGATCGCCAAAGTCGACGAAAAGCGCAAGTTACCAGTCAACTCCATCATCCTCAGC TGCATCATCAGCGCCCTACTATCCCTTATCAACATCGGGTCCGAGACCGCCTTCAACGCCATTGTCTCTCTCAAC GTAGCGGCCCTCATGTTCTCCTACTCCATCTCCATGAGCTGTCTGATCTGGCGAAAGATCTTCCACCCGCATACT CTGCCCCCTGCTCGCTGGGGGCTAGGACGCTATGGTCTGGCGGTAAATATCATTGGCTGGTTGTACGTACTGTTT GCCCTGTTTTGGTCGTTCTGGCCGGAGTCGACACCCGTCACGACTGAGACGTTTAACTGGAGTGTGGTGATTTTC GTGGCGGTATTTTTGGTGAGTTTGGTTATGTATGTGGTTCAGGGGAGACGCCACTATGATGGGCCGGTGACGGAG GTGAAGAGGTGTGAGGATTTGTAG |
| Transcript | >Ani_SJS72_1|g6244.t1 ATGGCCTTCACCCAGAACACGCAGCAGGATGCTGCCAAGGAATCCGTAGTTACTGGCTCGCACACTGTAGAAGTC GATGCTTCCAGTCAGGAGGAGGGTATCAATGGCACACGCTACGACGTGACTGAAATGGATCGGATGGGAAAGACC CAGCAGTTCAAGCGAAACATCCAGTCTTTTGCCGCCCTCAGTTTTTCGGCCGTATTGCAGTCTACGTGGGAGTAC ATCATGCTGTCGGACTATGAAGGGTTGCAAGATGGTGGATTGGCAGGTATGCTGTGGACCTATGTCTGGAGCGCC ATTGGATTTGGGTTCATCATCGTCTCTATCTCTGAGATGGCCTCGATGGCGCCTACTTCTGGAGGCCAGTACCAT TGGGTCTCCGAGTTTGCATCTCCCCGCTACCAGAAATTCCTTAGCTACGTGACTGGCTGGATGTCTGTTTTGGCG TGGCAGGCAGGAACCGCATCGGGCTCATTCTTGACTGGAACCATCATCCAGGGCCTGATTAGCGTCCGCGACCCC AACTACGACCCCACCGGATGGCAAGGCACATTGTTTGTGTTTGCGATGATTCTCATTGCGTTCTTCTTCAACATA TACGGTGCGGGATTCATGGCCCGTATGCAAAATGTGCTTCTGGCAACTCACGTCCTCTGCTGGCTGGTTGTTGTG GTGACACTTTGGGTCCTGGCCCCGCTACAGCCTGCTGAAGCAGTCTTCACGAAGTTTGAGAACTTCGGTGGATGG TCATCCATGGGTCTAACTGTGATGGTGGGTCAGCTTGCGGCCATCTATGGCTGTCTCAGTTGCGATGCAACGGCC CACATGTCAGAGGAAATCAAAGATGCAGGCCGTTACGTGCCTATTGCCATCACCTGGTCTTATTTCGCCAACGCT ATCTTAGCACTAGTCGTGCTCATCACAATGCTCTTCGCAACACCATCAGTTGAAGACTCACTCAACGATGACACC GGCTTTCCCTTCATCTACGTTTTCAAACAAGCGACCAACACAGCAGGCGTCAACGGTCTAACTGCCATTATTCTC ATTCCCGTGATAATAAGCAACATACTCTTCAACGCCTCCACTGCACGACAAACATTCTCCTTCGCTCGCGATCGC GGGCTCCCATTCTCCAACTGGATCGCCAAAGTCGACGAAAAGCGCAAGTTACCAGTCAACTCCATCATCCTCAGC TGCATCATCAGCGCCCTACTATCCCTTATCAACATCGGGTCCGAGACCGCCTTCAACGCCATTGTCTCTCTCAAC GTAGCGGCCCTCATGTTCTCCTACTCCATCTCCATGAGCTGTCTGATCTGGCGAAAGATCTTCCACCCGCATACT CTGCCCCCTGCTCGCTGGGGGCTAGGACGCTATGGTCTGGCGGTAAATATCATTGGCTGGTTGTACGTACTGTTT GCCCTGTTTTGGTCGTTCTGGCCGGAGTCGACACCCGTCACGACTGAGACGTTTAACTGGAGTGTGGTGATTTTC GTGGCGGTATTTTTGGTGAGTTTGGTTATGTATGTGGTTCAGGGGAGACGCCACTATGATGGGCCGGTGACGGAG GTGAAGAGGTGTGAGGATTTGTAG |
| Gene | >Ani_SJS72_1|g6244.t1 ATGGCCTTCACCCAGAACACGCAGCAGGATGCTGCCAAGGAATCCGTAGTTACTGGCTCGCACACTGTAGAAGTC GATGCTTCCAGTCAGGAGGAGGGTATCAATGGCACACGCTACGACGTGACTGAAATGGATCGGATGGGAAAGACC CAGCAGTTCAAGGTAGATATGCTGCTCCCAGACAATACCGCACAGCTAATTAATATGTTCGCAGCGAAACATCCA GTCTTTTGCCGCCCTCAGTTTTTCGGCCGTATTGCAGTCTACGTGGGAGTACATCATGCTGTGAGGCAACCAGAA TTTTCGCTACTCCCTTCAGGATCTAAACATTAGCAGGTCGGACTATGAAGGGTTGCAAGATGGTGGATTGGCAGG TATGCTGTGGACCTATGTCTGGAGCGCCATTGGATTTGGGTTCATCATCGTCTCTATCTCTGAGATGGCCTCGAT GTAAACTGCCCCGTCTTTATACAAACCATCACAGCAACTAACCCTCTAGGGCGCCTACTTCTGGAGGCCAGTACC ATTGGGTCTCCGAGTTTGCATCTCCCCGCTACCAGAAATTCCTTAGCTACGTGACTGGCTGGATGTCTGTTTTGG CGTGGCAGGCAGGAACCGCATCGGGCTCATTCTTGACTGGAACCATCATCCAGGGCCTGATTAGCGTCCGCGACC CCAACTACGACCCCACCGGATGGCAAGGCACATTGTTTGTGTTTGCGATGATTCTCATTGCGTTCTTCTTCAACA TATACGGTGCGGGATTCATGGCCCGTATGCAAAATGTGCTTCTGGCAACTCACGTCCTCTGCTGGCTGGTTGTTG TGGTGACACTTTGGGTCCTGGCCCCGCTACAGCCTGCTGAAGCAGTCTTCACGAAGTTTGAGAACTTCGGTGGAT GGTCATCCATGGGTCTAACTGTGATGGTGGGTCAGCTTGCGGCCATCTATGGCTGTCTCAGTATGTATACACGCA ACGAATCGAAATATCGACACTGACAAATACAGGTTGCGATGCAACGGCCCACATGTCAGAGGAAATCAAAGATGC AGGCCGTTACGTGCCTATTGCCATCACCTGGTCTTATTTCGCCAACGCTATCTTAGCACTAGTCGTGCTCATCAC AATGCTCTTCGCAACACCATCAGTTGAAGACTCACTCAACGATGACACCGGCTTTCCCTTCATCTACGTTTTCAA ACAAGCGACCAACACAGCAGGCGTCAACGGTCTAACTGCCATTATTCTCATTCCCGTGATAATAAGCAACATACT CTTCAACGCCTCCACTGCACGACAAACATTCTCCTTCGCTCGCGATCGCGGGCTCCCATTCTCCAACTGGATCGC CAAAGTCGACGAAAAGCGCAAGTTACCAGTCAACTCCATCATCCTCAGCTGCATCATCAGCGCCCTACTATCCCT TATCAACATCGGGTCCGAGACCGCCTTCAACGCCATTGTCTCTCTCAACGTAGCGGCCCTCATGTTCTCCTACTC CATCTCCATGAGCTGTCTGATCTGGCGAAAGATCTTCCACCCGCATACTCTGCCCCCTGCTCGCTGGGGGCTAGG ACGCTATGGTCTGGCGGTAAATATCATTGGCTGGTTGTACGTACTGTTTGCCCTGTTTTGGTCGTTCTGGCCGGA GTCGACACCCGTCACGACTGAGACGTTTAACTGGAGTGTGGTGATTTTCGTGGCGGTATTTTTGGTGAGTTTGGT TATGTATGTGGTTCAGGGGAGACGCCACTATGATGGGCCGGTGACGGAGGTGAAGAGGTGTGAGGATTTGTAG |