Fungal Genomics

at Utrecht University

General Properties

Protein IDAni_SJS72_1|g6241.t1
Gene name
Locationscaffold_046:38639..39449
Strand-
Gene length (bp)810
Transcript length (bp)810
Coding sequence length (bp)810
Protein length (aa) 270

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF13561 adh_short_C2 Enoyl-(Acyl carrier protein) reductase 5.5E-60 22 263
PF00106 adh_short short chain dehydrogenase 3.7E-45 7 206

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 18 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ani_SJS72_1|g6241.t1
MLRLDGKVALITGLGQTTDEGWGIGAAIAMKLSQQGAIIFGGNRTLSSAERTKARIEKEGGTCEVQETNVTDSTS
VKALVDSCMQRHGRIDILINNVGKSEPGGPAELSEETWDQQVDLNLKSVYLTSHFVLPIMEKQETGGTVINVSSI
AGLRYIGKPQVAYSATKAAIMQFTKATAVIYAGKGVRLNTVVPGLIYTPYTRDLAKRYAPGGDEEAYMKKRDEQV
PMGRMGDAWDVANATVFLASDEARYITGQELVVDGGITSSTGRV*
Coding >Ani_SJS72_1|g6241.t1
ATGCTACGTCTTGACGGCAAAGTCGCCCTTATCACCGGCCTCGGCCAGACCACCGACGAAGGCTGGGGTATCGGT
GCCGCCATCGCCATGAAACTCTCCCAGCAAGGCGCAATTATTTTCGGAGGCAATCGCACATTATCCAGTGCCGAA
AGAACAAAAGCCCGAATTGAAAAGGAGGGCGGAACATGCGAAGTCCAAGAAACAAACGTCACAGATTCCACATCC
GTCAAAGCTCTCGTGGATAGCTGCATGCAACGCCACGGGCGCATCGACATCCTGATCAACAACGTGGGAAAATCG
GAGCCAGGTGGCCCTGCCGAGCTAAGCGAGGAAACGTGGGACCAACAAGTTGATCTGAACCTGAAAAGCGTCTAT
CTGACGAGTCATTTTGTGCTTCCTATTATGGAGAAGCAGGAGACGGGCGGCACGGTGATAAATGTGTCGAGCATT
GCAGGGCTGCGGTATATCGGGAAGCCGCAGGTTGCATATTCGGCTACGAAAGCGGCCATTATGCAGTTCACGAAG
GCCACGGCGGTGATATATGCGGGGAAGGGAGTGAGGTTGAATACTGTTGTTCCTGGGCTGATTTATACGCCGTAC
ACTCGTGACCTTGCGAAGCGGTATGCTCCTGGGGGTGATGAAGAGGCGTACATGAAGAAGCGCGATGAACAGGTG
CCAATGGGACGCATGGGAGATGCTTGGGATGTGGCTAATGCCACGGTGTTTCTCGCTTCGGATGAGGCACGGTAT
ATCACGGGACAGGAGCTGGTGGTGGATGGAGGGATTACTTCTTCTACAGGGAGAGTATAA
Transcript >Ani_SJS72_1|g6241.t1
ATGCTACGTCTTGACGGCAAAGTCGCCCTTATCACCGGCCTCGGCCAGACCACCGACGAAGGCTGGGGTATCGGT
GCCGCCATCGCCATGAAACTCTCCCAGCAAGGCGCAATTATTTTCGGAGGCAATCGCACATTATCCAGTGCCGAA
AGAACAAAAGCCCGAATTGAAAAGGAGGGCGGAACATGCGAAGTCCAAGAAACAAACGTCACAGATTCCACATCC
GTCAAAGCTCTCGTGGATAGCTGCATGCAACGCCACGGGCGCATCGACATCCTGATCAACAACGTGGGAAAATCG
GAGCCAGGTGGCCCTGCCGAGCTAAGCGAGGAAACGTGGGACCAACAAGTTGATCTGAACCTGAAAAGCGTCTAT
CTGACGAGTCATTTTGTGCTTCCTATTATGGAGAAGCAGGAGACGGGCGGCACGGTGATAAATGTGTCGAGCATT
GCAGGGCTGCGGTATATCGGGAAGCCGCAGGTTGCATATTCGGCTACGAAAGCGGCCATTATGCAGTTCACGAAG
GCCACGGCGGTGATATATGCGGGGAAGGGAGTGAGGTTGAATACTGTTGTTCCTGGGCTGATTTATACGCCGTAC
ACTCGTGACCTTGCGAAGCGGTATGCTCCTGGGGGTGATGAAGAGGCGTACATGAAGAAGCGCGATGAACAGGTG
CCAATGGGACGCATGGGAGATGCTTGGGATGTGGCTAATGCCACGGTGTTTCTCGCTTCGGATGAGGCACGGTAT
ATCACGGGACAGGAGCTGGTGGTGGATGGAGGGATTACTTCTTCTACAGGGAGAGTATAA
Gene >Ani_SJS72_1|g6241.t1
ATGCTACGTCTTGACGGCAAAGTCGCCCTTATCACCGGCCTCGGCCAGACCACCGACGAAGGCTGGGGTATCGGT
GCCGCCATCGCCATGAAACTCTCCCAGCAAGGCGCAATTATTTTCGGAGGCAATCGCACATTATCCAGTGCCGAA
AGAACAAAAGCCCGAATTGAAAAGGAGGGCGGAACATGCGAAGTCCAAGAAACAAACGTCACAGATTCCACATCC
GTCAAAGCTCTCGTGGATAGCTGCATGCAACGCCACGGGCGCATCGACATCCTGATCAACAACGTGGGAAAATCG
GAGCCAGGTGGCCCTGCCGAGCTAAGCGAGGAAACGTGGGACCAACAAGTTGATCTGAACCTGAAAAGCGTCTAT
CTGACGAGTCATTTTGTGCTTCCTATTATGGAGAAGCAGGAGACGGGCGGCACGGTGATAAATGTGTCGAGCATT
GCAGGGCTGCGGTATATCGGGAAGCCGCAGGTTGCATATTCGGCTACGAAAGCGGCCATTATGCAGTTCACGAAG
GCCACGGCGGTGATATATGCGGGGAAGGGAGTGAGGTTGAATACTGTTGTTCCTGGGCTGATTTATACGCCGTAC
ACTCGTGACCTTGCGAAGCGGTATGCTCCTGGGGGTGATGAAGAGGCGTACATGAAGAAGCGCGATGAACAGGTG
CCAATGGGACGCATGGGAGATGCTTGGGATGTGGCTAATGCCACGGTGTTTCTCGCTTCGGATGAGGCACGGTAT
ATCACGGGACAGGAGCTGGTGGTGGATGGAGGGATTACTTCTTCTACAGGGAGAGTATAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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