© 2022 - Robin Ohm - Utrecht University - The Netherlands
Built with Python Django and Wagtail
| Protein ID | Ani_SJS72_1|g6236.t1 |
| Gene name | |
| Location | scaffold_046:29070..31110 |
| Strand | + |
| Gene length (bp) | 2040 |
| Transcript length (bp) | 1887 |
| Coding sequence length (bp) | 1887 |
| Protein length (aa) | 629 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF01735 | PLA2_B | Lysophospholipase catalytic domain | 4.7E-158 | 116 | 611 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0004620 | phospholipase activity | Yes |
| GO:0009395 | phospholipid catabolic process | Yes |
| GO:0006644 | phospholipid metabolic process | No |
| GO:0019637 | organophosphate metabolic process | No |
| GO:0044248 | cellular catabolic process | No |
| GO:0008150 | biological_process | No |
| GO:0008152 | metabolic process | No |
| GO:0016788 | hydrolase activity, acting on ester bonds | No |
| GO:0006793 | phosphorus metabolic process | No |
| GO:0044255 | cellular lipid metabolic process | No |
| GO:0016298 | lipase activity | No |
| GO:0006796 | phosphate-containing compound metabolic process | No |
| GO:0003674 | molecular_function | No |
| GO:0046434 | organophosphate catabolic process | No |
| GO:0009987 | cellular process | No |
| GO:0016042 | lipid catabolic process | No |
| GO:0006629 | lipid metabolic process | No |
| GO:0009056 | catabolic process | No |
| GO:0071704 | organic substance metabolic process | No |
| GO:1901575 | organic substance catabolic process | No |
| GO:0044242 | cellular lipid catabolic process | No |
| GO:0003824 | catalytic activity | No |
| GO:0016787 | hydrolase activity | No |
| GO:0044238 | primary metabolic process | No |
| GO:0044237 | cellular metabolic process | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| Yes | 1 - 21 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS72_1|g6236.t1 MKTCALLGSVALAFLPSTTAAPSQINNRRARTDVSVERRALSTATNPYAPVHVSCPPNRPSIRGAATLSPEEVSW LKTRREQSLSGLKEFFGHVEIDCFDALDYLDTSDSSSLPNVAIAISGGGMRAMLNGAGAIKAFDSRTEGTAAEGQ LGGLLQSSTYVAALSGGSWLLSSVFMNNFTTISALQDSFWDFSSASILEGPATMEPTDFWGNVTAQVKAKRAAGF TTTDADIWGRAEGYYFLNASHGGVDIHWSSIAKTPSFQHGDMPLPLVVVDGQSFADANDEPGQDKPIYEVSPWEF GTYDDNMYGFAPLEYLGTRFVNGQVPENETCVRGFDSAGFITGTSSDIWNENGTGIAATLRDAIAEVSTNTTEGA LEVELLSYMLEEVVSALSSNNTAISGPAAYEPNPFYKYNANTSPFAETTRLTVVDGGEDEENIPLNPLIQRKRDV DVIFAIDSNNNNAGYKWPTGESLIATYERTLAGYANDTSFPSIPDGNTFVNLGLISHPTFFGCNSSNMTTPAPLI VYLPNHPVTYMSNTTTTDTTFNTTARDAMITNGYNVATQANGTLDNEWTTCVGCAVLSRSFDRTNTPVPAACDRC FQRYCWNGTLDTSTPAVYDPSIIFPSGL* |
| Coding | >Ani_SJS72_1|g6236.t1 ATGAAGACGTGTGCACTACTTGGCTCAGTTGCCTTGGCATTTTTGCCGTCCACAACTGCTGCCCCATCCCAAATA AATAATCGCCGAGCTCGAACGGACGTCAGCGTTGAGCGCCGTGCCTTGTCAACTGCCACAAACCCTTATGCTCCG GTTCATGTTTCCTGTCCGCCCAACCGGCCCAGCATTCGTGGCGCTGCAACGCTCTCTCCGGAGGAAGTTTCCTGG TTGAAGACCCGACGTGAACAGTCTCTATCGGGGCTGAAGGAGTTTTTCGGTCATGTTGAGATTGATTGTTTCGAC GCCTTGGATTACCTCGACACAAGCGACTCTTCCAGCTTACCCAATGTTGCAATTGCTATATCCGGCGGTGGTATG CGCGCAATGTTGAATGGTGCTGGTGCCATCAAAGCGTTCGACAGTCGGACTGAAGGTACAGCGGCCGAGGGCCAG CTGGGTGGTCTACTTCAATCTTCCACTTATGTTGCTGCTCTCAGTGGAGGCTCCTGGCTGCTTTCCTCTGTATTC ATGAACAACTTTACAACCATTTCTGCCCTTCAGGACAGTTTCTGGGACTTTAGTTCAGCATCTATTCTTGAAGGA CCTGCAACCATGGAGCCTACCGACTTTTGGGGTAATGTTACAGCTCAAGTGAAGGCCAAGAGGGCTGCTGGTTTT ACTACTACTGACGCGGATATTTGGGGTCGGGCTGAAGGCTACTACTTCCTCAACGCTAGCCATGGTGGCGTTGAC ATCCATTGGTCCTCGATTGCGAAGACACCGTCCTTCCAACACGGAGACATGCCACTGCCACTGGTGGTTGTCGAC GGCCAGTCCTTCGCGGACGCCAACGACGAACCCGGTCAAGATAAACCCATCTACGAAGTCTCACCCTGGGAATTC GGAACTTACGACGACAATATGTATGGCTTCGCACCACTTGAGTACTTGGGCACCCGATTCGTGAACGGCCAGGTG CCCGAAAATGAGACCTGCGTGCGCGGCTTCGATAGCGCTGGATTTATCACCGGAACGTCCAGCGACATCTGGAAC GAAAACGGCACAGGTATTGCTGCTACCCTACGTGATGCGATTGCGGAGGTTTCAACCAATACCACCGAGGGTGCT CTGGAAGTGGAGCTGCTGTCGTACATGCTTGAAGAAGTTGTCAGTGCCCTCAGCTCCAACAACACCGCCATCAGT GGCCCCGCAGCCTATGAACCAAACCCATTCTACAAATACAACGCGAACACCTCACCTTTTGCAGAGACTACAAGA TTGACGGTGGTCGATGGCGGTGAAGACGAAGAGAACATTCCCCTAAACCCACTGATCCAGAGAAAGCGTGACGTG GATGTCATCTTCGCCATCGATTCCAACAACAATAACGCCGGCTACAAATGGCCCACTGGGGAGTCGCTTATCGCC ACTTATGAGCGAACTCTGGCTGGTTACGCCAACGATACTTCTTTCCCTTCTATTCCGGATGGAAATACCTTTGTC AACTTGGGTCTTATCAGCCACCCTACGTTCTTCGGTTGCAACAGCTCGAACATGACTACACCTGCTCCGTTGATT GTCTACTTGCCTAACCACCCCGTCACCTACATGTCCAACACAACAACTACAGATACCACTTTCAATACCACAGCC CGTGACGCTATGATAACCAATGGTTATAATGTTGCGACCCAGGCAAATGGCACGCTGGATAATGAGTGGACTACT TGTGTGGGATGCGCTGTCCTTAGTCGTTCGTTTGACAGGACCAATACACCTGTGCCTGCTGCTTGCGACCGGTGC TTTCAGCGCTATTGCTGGAACGGAACGCTCGATACCAGTACTCCAGCGGTCTACGATCCATCGATCATTTTCCCA TCTGGCTTGTAA |
| Transcript | >Ani_SJS72_1|g6236.t1 ATGAAGACGTGTGCACTACTTGGCTCAGTTGCCTTGGCATTTTTGCCGTCCACAACTGCTGCCCCATCCCAAATA AATAATCGCCGAGCTCGAACGGACGTCAGCGTTGAGCGCCGTGCCTTGTCAACTGCCACAAACCCTTATGCTCCG GTTCATGTTTCCTGTCCGCCCAACCGGCCCAGCATTCGTGGCGCTGCAACGCTCTCTCCGGAGGAAGTTTCCTGG TTGAAGACCCGACGTGAACAGTCTCTATCGGGGCTGAAGGAGTTTTTCGGTCATGTTGAGATTGATTGTTTCGAC GCCTTGGATTACCTCGACACAAGCGACTCTTCCAGCTTACCCAATGTTGCAATTGCTATATCCGGCGGTGGTATG CGCGCAATGTTGAATGGTGCTGGTGCCATCAAAGCGTTCGACAGTCGGACTGAAGGTACAGCGGCCGAGGGCCAG CTGGGTGGTCTACTTCAATCTTCCACTTATGTTGCTGCTCTCAGTGGAGGCTCCTGGCTGCTTTCCTCTGTATTC ATGAACAACTTTACAACCATTTCTGCCCTTCAGGACAGTTTCTGGGACTTTAGTTCAGCATCTATTCTTGAAGGA CCTGCAACCATGGAGCCTACCGACTTTTGGGGTAATGTTACAGCTCAAGTGAAGGCCAAGAGGGCTGCTGGTTTT ACTACTACTGACGCGGATATTTGGGGTCGGGCTGAAGGCTACTACTTCCTCAACGCTAGCCATGGTGGCGTTGAC ATCCATTGGTCCTCGATTGCGAAGACACCGTCCTTCCAACACGGAGACATGCCACTGCCACTGGTGGTTGTCGAC GGCCAGTCCTTCGCGGACGCCAACGACGAACCCGGTCAAGATAAACCCATCTACGAAGTCTCACCCTGGGAATTC GGAACTTACGACGACAATATGTATGGCTTCGCACCACTTGAGTACTTGGGCACCCGATTCGTGAACGGCCAGGTG CCCGAAAATGAGACCTGCGTGCGCGGCTTCGATAGCGCTGGATTTATCACCGGAACGTCCAGCGACATCTGGAAC GAAAACGGCACAGGTATTGCTGCTACCCTACGTGATGCGATTGCGGAGGTTTCAACCAATACCACCGAGGGTGCT CTGGAAGTGGAGCTGCTGTCGTACATGCTTGAAGAAGTTGTCAGTGCCCTCAGCTCCAACAACACCGCCATCAGT GGCCCCGCAGCCTATGAACCAAACCCATTCTACAAATACAACGCGAACACCTCACCTTTTGCAGAGACTACAAGA TTGACGGTGGTCGATGGCGGTGAAGACGAAGAGAACATTCCCCTAAACCCACTGATCCAGAGAAAGCGTGACGTG GATGTCATCTTCGCCATCGATTCCAACAACAATAACGCCGGCTACAAATGGCCCACTGGGGAGTCGCTTATCGCC ACTTATGAGCGAACTCTGGCTGGTTACGCCAACGATACTTCTTTCCCTTCTATTCCGGATGGAAATACCTTTGTC AACTTGGGTCTTATCAGCCACCCTACGTTCTTCGGTTGCAACAGCTCGAACATGACTACACCTGCTCCGTTGATT GTCTACTTGCCTAACCACCCCGTCACCTACATGTCCAACACAACAACTACAGATACCACTTTCAATACCACAGCC CGTGACGCTATGATAACCAATGGTTATAATGTTGCGACCCAGGCAAATGGCACGCTGGATAATGAGTGGACTACT TGTGTGGGATGCGCTGTCCTTAGTCGTTCGTTTGACAGGACCAATACACCTGTGCCTGCTGCTTGCGACCGGTGC TTTCAGCGCTATTGCTGGAACGGAACGCTCGATACCAGTACTCCAGCGGTCTACGATCCATCGATCATTTTCCCA TCTGGCTTGTAA |
| Gene | >Ani_SJS72_1|g6236.t1 ATGAAGACGTGTGCACTACTTGGCTCAGTTGCCTTGGCATTTTTGCCGTGTAAGTCCCTTGCACATTTCTTACGA TTTTTCAACATCACGGTGCTACTCGATTCAAGTGACTAACTGGTATTGCGTCCCGTTTAGCCACAACTGCTGCCC CATCCCAAATAAATAATCGCCGAGCTCGAACGGACGTCAGCGTTGAGCGCCGTGCCTTGTCAACTGCCACAAACC CTTATGCTCCGGTTCATGTTTCCTGTCCGCCCAACCGGCCCAGCATTCGTGGCGCTGCAACGCTCTCTCCGGAGG AAGTTTCCTGGTTGAAGACCCGACGTGAACAGTCTCTATCGGGGCTGAAGGAGTTTTTCGGTCATGTTGAGATTG ATTGTTTCGACGCCTTGGATTACCTCGACACAAGCGACTCTTCCAGCTTACCCAATGTTGCAATTGCTATATCCG GCGGTGGTATGCGCGCAATGTTGAATGGTGCTGGTGCCATCAAAGCGTTCGACAGTCGGACTGAAGGTACAGCGG CCGAGGGCCAGCTGGGTGGTCTACTTCAATCTTCCACTTATGTTGCTGCTCTCAGTGGAGGCTCCTGGCTGCTTT CCTCTGTATTCATGAACAACTTTACAACCATTTCTGCCCTTCAGGACAGTTTCTGGGACTTTAGTTCAGCATCTA TTCTTGAAGGACCTGCAACCATGGAGCCTACCGACTTTTGGGGTAATGTTACAGCTCAAGTGAAGGCCAAGAGGG CTGCTGGTTTTACTACTACTGACGCGGATATTTGGTAAGCCACTTACTCACATAAGAGTCAACACGACATGAACA GCACGGGCAGATGCTAACTAATGCAGGGGTCGGGCTGAAGGCTACTACTTCCTCAACGCTAGCCATGGTGGCGTT GACATCCATTGGTCCTCGATTGCGAAGACACCGTCCTTCCAACACGGAGACATGCCACTGCCACTGGTGGTTGTC GACGGCCAGTCCTTCGCGGACGCCAACGACGAACCCGGTCAAGATAAACCCATCTACGAAGTCTCACCCTGGGAA TTCGGAACTTACGACGACAATATGTATGGCTTCGCACCACTTGAGTACTTGGGCACCCGATTCGTGAACGGCCAG GTGCCCGAAAATGAGACCTGCGTGCGCGGCTTCGATAGCGCTGGATTTATCACCGGAACGTCCAGCGACATCTGG AACGAAAACGGCACAGGTATTGCTGCTACCCTACGTGATGCGATTGCGGAGGTTTCAACCAATACCACCGAGGGT GCTCTGGAAGTGGAGCTGCTGTCGTACATGCTTGAAGAAGTTGTCAGTGCCCTCAGCTCCAACAACACCGCCATC AGTGGCCCCGCAGCCTATGAACCAAACCCATTCTACAAATACAACGCGAACACCTCACCTTTTGCAGAGACTACA AGATTGACGGTGGTCGATGGCGGTGAAGACGAAGAGAACATTCCCCTAAACCCACTGATCCAGAGAAAGCGTGAC GTGGATGTCATCTTCGCCATCGATTCCAACAACAATAACGCCGGCTACAAATGGCCCACTGGGGAGTCGCTTATC GCCACTTATGAGCGAACTCTGGCTGGTTACGCCAACGATACTTCTTTCCCTTCTATTCCGGATGGAAATACCTTT GTCAACTTGGGTCTTATCAGCCACCCTACGTTCTTCGGTTGCAACAGCTCGAACATGACTACACCTGCTCCGTTG ATTGTCTACTTGCCTAACCACCCCGTCACCTACATGTCCAACACAACAACTACAGATACCACTTTCAATACCACA GCCCGTGACGCTATGATAACCAATGGTTATAATGTTGCGACCCAGGCAAATGGCACGCTGGATAATGAGTGGACT ACTTGTGTGGGATGCGCTGTCCTTAGTCGTTCGTTTGACAGGACCAATACACCTGTGCCTGCTGCTTGCGACCGG TGCTTTCAGCGCTATTGCTGGAACGGAACGCTCGATACCAGTACTCCAGCGGTCTACGATCCATCGATCATTTTC CCATCTGGCTTGTAA |