Fungal Genomics

at Utrecht University

General Properties

Protein IDAni_SJS72_1|g6235.t1
Gene name
Locationscaffold_046:27225..28008
Strand+
Gene length (bp)783
Transcript length (bp)672
Coding sequence length (bp)672
Protein length (aa) 224

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PFAM Domains

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 22 0.45

Transmembrane Domains

Domain # Start End Length
1 56 78 22
2 93 115 22
3 135 157 22
4 172 194 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ani_SJS72_1|g6235.t1
MSCSARVIGGALGVRDSSSMAANIIQSVGITPLILCVDGLVHEARTYRFPHASRRLNWCVVIGTSVTMVVAISLS
IKACLDIFENKAQSDDYSLWKAGSSLTVVVWLFQIGWSVYSLQFHDKGIQGPGYQGGTVLLQGALVALAFIGVRV
IYALVAVCTESKDLSPVYGLMSVRVVLMFLPELFATVTMMVVGVRTRHLRELKDETDYGKLDVVKPTSVGIAA*
Coding >Ani_SJS72_1|g6235.t1
ATGTCCTGCTCCGCTCGAGTTATTGGAGGTGCTCTAGGAGTTCGCGACAGCAGCAGCATGGCAGCGAATATCATT
CAGAGCGTGGGAATCACGCCTTTAATTCTATGCGTTGACGGATTGGTTCATGAAGCCCGAACGTATCGCTTTCCC
CATGCCAGCCGTCGCCTCAATTGGTGCGTCGTGATTGGAACATCAGTTACCATGGTGGTAGCTATAAGTCTTTCT
ATCAAGGCATGTCTGGATATTTTCGAGAACAAAGCACAGTCCGACGATTATTCATTATGGAAGGCTGGATCATCC
CTGACCGTTGTGGTTTGGCTCTTCCAGATTGGGTGGTCGGTTTACTCCCTACAATTCCACGATAAAGGAATTCAA
GGTCCGGGATATCAAGGCGGCACTGTGCTCCTTCAGGGTGCGCTGGTTGCACTAGCATTCATTGGTGTCCGTGTC
ATCTACGCACTTGTTGCTGTTTGCACCGAGAGTAAAGATCTTAGTCCAGTGTATGGACTAATGTCCGTCCGTGTT
GTTCTCATGTTCCTGCCGGAGTTGTTTGCGACCGTAACCATGATGGTCGTGGGTGTCCGCACCAGACATCTCCGA
GAGCTGAAAGACGAAACGGACTATGGAAAGCTTGATGTGGTCAAGCCTACTTCGGTTGGCATTGCGGCTTAG
Transcript >Ani_SJS72_1|g6235.t1
ATGTCCTGCTCCGCTCGAGTTATTGGAGGTGCTCTAGGAGTTCGCGACAGCAGCAGCATGGCAGCGAATATCATT
CAGAGCGTGGGAATCACGCCTTTAATTCTATGCGTTGACGGATTGGTTCATGAAGCCCGAACGTATCGCTTTCCC
CATGCCAGCCGTCGCCTCAATTGGTGCGTCGTGATTGGAACATCAGTTACCATGGTGGTAGCTATAAGTCTTTCT
ATCAAGGCATGTCTGGATATTTTCGAGAACAAAGCACAGTCCGACGATTATTCATTATGGAAGGCTGGATCATCC
CTGACCGTTGTGGTTTGGCTCTTCCAGATTGGGTGGTCGGTTTACTCCCTACAATTCCACGATAAAGGAATTCAA
GGTCCGGGATATCAAGGCGGCACTGTGCTCCTTCAGGGTGCGCTGGTTGCACTAGCATTCATTGGTGTCCGTGTC
ATCTACGCACTTGTTGCTGTTTGCACCGAGAGTAAAGATCTTAGTCCAGTGTATGGACTAATGTCCGTCCGTGTT
GTTCTCATGTTCCTGCCGGAGTTGTTTGCGACCGTAACCATGATGGTCGTGGGTGTCCGCACCAGACATCTCCGA
GAGCTGAAAGACGAAACGGACTATGGAAAGCTTGATGTGGTCAAGCCTACTTCGGTTGGCATTGCGGCTTAG
Gene >Ani_SJS72_1|g6235.t1
ATGTCCTGCTCCGCTCGAGTTATTGGAGGTGCTCTAGGAGTTCGCGACAGCAGCAGCATGGCAGCGAATATCATT
CAGAGCGTGGGAATCACGCCTTTAATTCTATGCGTTGACGGATTGGTTCATGAAGCGTACGTTCACGCCTCAAGA
TATGCTAGATCCGGTACTAAATTAGCAACAGCCGAACGTATCGCTTTCCCCATGCCAGCCGTCGCCTCAATTGGT
GCGTCGTGATTGGAACATCAGTTACCATGGTGGTAGCTATAAGTCTTTCTATCAAGGCATGTCTGGATATTTTCG
AGAACAAAGCACAGTCCGACGATTATTCATTATGGAAGGCTGGATCATCCCTGACCGTTGTGGTTTGGCTCTTCC
AGATTGGGTGGTCGGTTTACTCCCTACAATTCCACGATAAAGGAATTCAAGGTCCGGGATATCAAGGCGGCACTG
TGGTGAGTATTGCGTACCTCTCATCTTGATACTTACCATTACTTGGCTAACATGTGTTTACAGCTCCTTCAGGGT
GCGCTGGTTGCACTAGCATTCATTGGTGTCCGTGTCATCTACGCACTTGTTGCTGTTTGCACCGAGAGTAAAGAT
CTTAGTCCAGTGTATGGACTAATGTCCGTCCGTGTTGTTCTCATGTTCCTGCCGGAGTTGTTTGCGACCGTAACC
ATGATGGTCGTGGGTGTCCGCACCAGACATCTCCGAGAGCTGAAAGACGAAACGGACTATGGAAAGCTTGATGTG
GTCAAGCCTACTTCGGTTGGCATTGCGGCTTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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