© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS72_1|g6225.t1 |
| Gene name | |
| Location | scaffold_045:265538..267857 |
| Strand | - |
| Gene length (bp) | 2319 |
| Transcript length (bp) | 1815 |
| Coding sequence length (bp) | 1815 |
| Protein length (aa) | 605 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00005 | ABC_tran | ABC transporter | 3.0E-16 | 102 | 247 |
| PF00005 | ABC_tran | ABC transporter | 2.1E-15 | 371 | 493 |
| PF04068 | RLI | Possible Fer4-like domain in RNase L inhibitor, RLI | 3.7E-14 | 6 | 37 |
| PF00037 | Fer4 | 4Fe-4S binding domain | 8.0E-05 | 50 | 70 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0005524 | ATP binding | Yes |
| GO:1901265 | nucleoside phosphate binding | No |
| GO:0005488 | binding | No |
| GO:0032553 | ribonucleotide binding | No |
| GO:0097159 | organic cyclic compound binding | No |
| GO:0017076 | purine nucleotide binding | No |
| GO:0032555 | purine ribonucleotide binding | No |
| GO:0043168 | anion binding | No |
| GO:0043167 | ion binding | No |
| GO:0003674 | molecular_function | No |
| GO:0032559 | adenyl ribonucleotide binding | No |
| GO:0036094 | small molecule binding | No |
| GO:1901363 | heterocyclic compound binding | No |
| GO:0035639 | purine ribonucleoside triphosphate binding | No |
| GO:0097367 | carbohydrate derivative binding | No |
| GO:0000166 | nucleotide binding | No |
| GO:0030554 | adenyl nucleotide binding | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 22 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS72_1|g6225.t1 MSDKLTRVAIVNSDKCKPKKCRQECKKSCPVVRTGKLCIEVTPESKIAFISERLCIGCGICPKKCPFGAIHIINL PTNLETQVTHRYSANSFKLHRLPMPRPGQVLGLVGTNGIGKSTALKILSGKLKPNLGRFDNPPDWEEILKYFRGS ELQNYFTKVLEDDLKAVVKPQYVDQIPRAVKGPVQNVGALIKARAQLDNLDHILDTLELRQVQDRDIGHLSGGEL QRFAIGLVCVQKADVYMFDEPSSYLDVKQRLAAARSIRELLRPDDYVIVVEHDLSVLDYLSDFVCVLYGRPALYG VVTLPASVREGINIFLDGHIPTENLRFREESLTFRLAEAGDDFMVDRARAFAYPSMEKTLGNFHLKIDAGSFTDS EIIVMMGENGTGKTTFCKMLAGAEKPDGGKSVPRLNISMKPQKITPKFQGTVRQLFFKRIKAAFLSPQFQTDVYK PLKIDDFIDQEVQNLSGGELQRVAIVLALGIPADIYLIDEPSAYLDSEQRIVASRVIKRFIMHTKKTAFIVEHDF IMATYLADRVIVFDGQPSVDAHANAPESLVTGCNTFLKNLDVTFRRDPNSYRPRINKYQSQMDQEQKLAGNYFFL EEEK* |
| Coding | >Ani_SJS72_1|g6225.t1 ATGTCTGACAAGCTTACCCGTGTTGCTATTGTCAACAGTGACAAATGCAAACCCAAGAAATGTCGCCAGGAATGT AAGAAGTCTTGCCCCGTCGTCCGTACGGGTAAGCTGTGTATCGAGGTCACTCCCGAGTCCAAGATTGCCTTCATC TCCGAGCGCCTCTGTATCGGTTGCGGTATCTGTCCCAAGAAATGCCCCTTCGGTGCCATTCACATCATCAACCTG CCGACCAACCTGGAGACCCAAGTTACCCACCGTTACTCCGCCAACAGTTTCAAGCTTCACCGTCTTCCCATGCCC CGTCCCGGACAGGTGCTTGGTCTCGTCGGTACCAACGGTATTGGAAAGAGTACGGCGTTGAAGATTCTCAGTGGA AAGCTGAAGCCCAACCTTGGACGTTTTGACAACCCTCCCGACTGGGAAGAAATCCTCAAGTACTTCCGTGGTTCC GAACTGCAGAACTACTTCACCAAGGTTCTGGAGGATGATCTCAAGGCTGTTGTGAAGCCTCAATATGTCGATCAG ATTCCCAGGGCTGTCAAGGGCCCCGTTCAGAACGTTGGAGCCCTCATCAAGGCCCGCGCCCAGTTGGACAACCTG GATCACATTCTCGACACTCTTGAGTTGAGACAGGTCCAAGACCGTGATATCGGTCACCTTTCTGGTGGAGAGCTC CAGCGTTTCGCCATTGGTCTGGTTTGCGTCCAGAAGGCTGACGTTTACATGTTCGACGAGCCTTCCTCCTATCTC GATGTTAAGCAGCGTCTCGCCGCCGCTCGCTCCATCAGAGAGCTCCTCCGCCCTGACGATTATGTCATCGTTGTC GAGCACGATTTGTCTGTTCTTGATTACCTGTCTGACTTCGTCTGTGTGCTCTATGGAAGACCCGCCCTTTACGGT GTGGTTACTCTGCCTGCTTCCGTCCGTGAAGGTATCAACATCTTCTTGGATGGTCACATCCCTACCGAGAACTTG CGATTCCGTGAGGAGTCTCTTACTTTCCGTCTTGCTGAGGCTGGCGATGACTTCATGGTGGACAGAGCCCGTGCT TTCGCCTACCCCAGCATGGAGAAGACTCTCGGTAACTTCCACCTCAAGATCGATGCTGGAAGTTTCACCGACTCT GAGATTATTGTCATGATGGGTGAGAACGGAACCGGAAAGACCACCTTCTGTAAGATGCTTGCTGGTGCTGAGAAG CCTGACGGTGGCAAGAGCGTTCCTCGCCTGAACATCTCCATGAAGCCTCAGAAGATCACCCCCAAGTTCCAGGGT ACCGTCCGTCAGCTGTTCTTCAAGCGTATCAAGGCCGCGTTCCTGTCGCCCCAGTTCCAGACTGATGTCTACAAG CCCCTCAAGATTGATGACTTCATTGACCAGGAAGTCCAGAATCTGTCTGGTGGTGAATTGCAGCGTGTTGCTATT GTCCTGGCTCTGGGAATCCCCGCCGATATCTACCTCATTGACGAGCCTAGTGCTTACCTGGACTCCGAGCAGCGT ATCGTGGCCTCCAGGGTCATCAAGCGTTTCATCATGCACACCAAGAAGACTGCTTTCATCGTCGAGCACGATTTC ATCATGGCCACTTATCTCGCCGATCGTGTCATCGTCTTCGATGGTCAGCCCTCCGTCGATGCTCACGCCAACGCC CCTGAGTCCCTGGTCACTGGTTGCAACACTTTCTTGAAGAACCTGGATGTCACCTTCCGTCGTGACCCCAACAGT TACCGCCCTCGTATTAACAAGTACCAGTCCCAGATGGACCAGGAGCAGAAGTTGGCCGGCAACTACTTCTTCTTG GAAGAAGAGAAATGA |
| Transcript | >Ani_SJS72_1|g6225.t1 ATGTCTGACAAGCTTACCCGTGTTGCTATTGTCAACAGTGACAAATGCAAACCCAAGAAATGTCGCCAGGAATGT AAGAAGTCTTGCCCCGTCGTCCGTACGGGTAAGCTGTGTATCGAGGTCACTCCCGAGTCCAAGATTGCCTTCATC TCCGAGCGCCTCTGTATCGGTTGCGGTATCTGTCCCAAGAAATGCCCCTTCGGTGCCATTCACATCATCAACCTG CCGACCAACCTGGAGACCCAAGTTACCCACCGTTACTCCGCCAACAGTTTCAAGCTTCACCGTCTTCCCATGCCC CGTCCCGGACAGGTGCTTGGTCTCGTCGGTACCAACGGTATTGGAAAGAGTACGGCGTTGAAGATTCTCAGTGGA AAGCTGAAGCCCAACCTTGGACGTTTTGACAACCCTCCCGACTGGGAAGAAATCCTCAAGTACTTCCGTGGTTCC GAACTGCAGAACTACTTCACCAAGGTTCTGGAGGATGATCTCAAGGCTGTTGTGAAGCCTCAATATGTCGATCAG ATTCCCAGGGCTGTCAAGGGCCCCGTTCAGAACGTTGGAGCCCTCATCAAGGCCCGCGCCCAGTTGGACAACCTG GATCACATTCTCGACACTCTTGAGTTGAGACAGGTCCAAGACCGTGATATCGGTCACCTTTCTGGTGGAGAGCTC CAGCGTTTCGCCATTGGTCTGGTTTGCGTCCAGAAGGCTGACGTTTACATGTTCGACGAGCCTTCCTCCTATCTC GATGTTAAGCAGCGTCTCGCCGCCGCTCGCTCCATCAGAGAGCTCCTCCGCCCTGACGATTATGTCATCGTTGTC GAGCACGATTTGTCTGTTCTTGATTACCTGTCTGACTTCGTCTGTGTGCTCTATGGAAGACCCGCCCTTTACGGT GTGGTTACTCTGCCTGCTTCCGTCCGTGAAGGTATCAACATCTTCTTGGATGGTCACATCCCTACCGAGAACTTG CGATTCCGTGAGGAGTCTCTTACTTTCCGTCTTGCTGAGGCTGGCGATGACTTCATGGTGGACAGAGCCCGTGCT TTCGCCTACCCCAGCATGGAGAAGACTCTCGGTAACTTCCACCTCAAGATCGATGCTGGAAGTTTCACCGACTCT GAGATTATTGTCATGATGGGTGAGAACGGAACCGGAAAGACCACCTTCTGTAAGATGCTTGCTGGTGCTGAGAAG CCTGACGGTGGCAAGAGCGTTCCTCGCCTGAACATCTCCATGAAGCCTCAGAAGATCACCCCCAAGTTCCAGGGT ACCGTCCGTCAGCTGTTCTTCAAGCGTATCAAGGCCGCGTTCCTGTCGCCCCAGTTCCAGACTGATGTCTACAAG CCCCTCAAGATTGATGACTTCATTGACCAGGAAGTCCAGAATCTGTCTGGTGGTGAATTGCAGCGTGTTGCTATT GTCCTGGCTCTGGGAATCCCCGCCGATATCTACCTCATTGACGAGCCTAGTGCTTACCTGGACTCCGAGCAGCGT ATCGTGGCCTCCAGGGTCATCAAGCGTTTCATCATGCACACCAAGAAGACTGCTTTCATCGTCGAGCACGATTTC ATCATGGCCACTTATCTCGCCGATCGTGTCATCGTCTTCGATGGTCAGCCCTCCGTCGATGCTCACGCCAACGCC CCTGAGTCCCTGGTCACTGGTTGCAACACTTTCTTGAAGAACCTGGATGTCACCTTCCGTCGTGACCCCAACAGT TACCGCCCTCGTATTAACAAGTACCAGTCCCAGATGGACCAGGAGCAGAAGTTGGCCGGCAACTACTTCTTCTTG GAAGAAGAGAAATGA |
| Gene | >Ani_SJS72_1|g6225.t1 ATGTCTGACAAGCTTACCCGGTATGGCTCCTCCTGTCTGCTTTGTTTATTTCTTTTGGTCAAACCATCTAACAGA TTTCGGTATCTAGTGTTGCTATTGTCAACAGTGACAAAGTGAGTTTCCTATACCCCGCGGCATACGCTGCCAACA ACCATGTGTCGACGCTCCAACGTATACTGAGACATCTCGCTTGGCTGGTAATAGTGCAAACCCAAGGTACGCGAA TCTCCCAATATTCCTGCTTTCTTCGCGCCCCCAGACCAGTCTTCTAACGCTCCATCCTTTCTCTTCTAGAAATGT CGCCAGGAATGTAAGAAGTCTTGCCCCGTCGTCCGTACGGGTAAGCTGTGTATCGAGGTCACTCCCGAGTCCAAG ATTGCCTTCATCTCCGAGCGCCTCTGTATCGGTTGCGGTATCTGTCCCAAGAAATGCCCCTTCGGTGCCATTCAC ATCATCAACCTGCCGACCAACCTGGAGACCCAAGTTACCCACCGTTACTCCGCCAACAGTTTCAAGCTTCACCGT CTTCCCATGCCCCGTCCCGGACAGGTGCTTGGTCTCGTCGGTACCAACGGTATTGGAAAGAGTACGGCGTTGAAG ATTCTCAGTGGAAAGCTGAAGCCCAACCTTGGACGTTTTGACAACCCTCCCGACTGGGAAGAAATCCTCAAGTAC TTCCGTGGTTCCGAACTGCAGAGTACGTATAAACAGTATCGTGGAGTTGAGTTTTACAGACTTCTAATTGTATGC AGACTACTTCACCAAGGTTCTGGAGGATGATCTCAAGGCTGTTGTGAAGCCTCAATATGTCGATCAGATTCCCAG GGCTGTCAAGGGCCCCGTTCAGAACGTTGGAGCCCTCATCAAGGCCCGCGCCCAGTTGGACAACCTGGATCACAT TCTCGACACTCTTGGTATGGCGCAGTTGCAAAACGAGCTTATTAACAACACTGCTAATGATATATGCAGAGTTGA GACAGGTCCAAGACCGTGATATCGGTCACCTTTCTGGTGGAGAGCTCCAGCGTTTCGCCATTGGTCTGGTTTGCG TCCAGAAGGCTGACGTGTAAGAACAATATCTGGAACCGTCTCTATTTGCGCAAGAGCTGACAAACTTTACAGTTA CATGTTCGACGAGCCTTCCTCCTATCTCGATGTTAAGCAGCGTCTCGCCGCCGCTCGCTCCATCAGAGAGCTCCT CCGCCCTGACGATTATGTCATCGTTGTCGAGCACGATTTGTCTGTTCTTGATTACCTGTCTGACTTCGTCTGTGT GCTCTATGGAAGACCCGCCCTTTACGGTGTGGTTACTCTGCCTGCTTCCGTCCGTGAAGGTATCAACATCTTCTT GGATGGTCACATCCCTACCGAGAACTTGCGATTCCGTGAGGAGTCTCTTACTTTCCGTCTTGCTGAGGCTGGCGA TGACTTCATGGTGGACAGAGCCCGTGCTTTCGCCTACCCCAGCATGGAGAAGACTCTCGGTAACTTCCACCTCAA GATCGATGCTGGAAGTTTCACCGACTCTGAGATTATTGTCATGATGGGTGAGAACGGAACCGGAAAGACCACCTT CTGTAAGATGCTTGCTGGTGCTGAGAAGCCTGACGGTGGCAAGAGCGTTCCTCGCCTGAACATCTCCATGAAGCC TCAGAAGATCACCCCCAAGTTCCAGGGTACCGTCCGTCAGCTGTTCTTCAAGCGTATCAAGGCCGCGTTCCTGTC GCCCCAGTTCCAGACTGATGTCTACAAGCCCCTCAAGATTGATGACTTCATTGACCAGGAAGTCCAGAATCTGTC TGGTGGTGAATTGCAGCGTGTTGCTATTGTCCTGGCTCTGGGAATCCCCGCCGATATCTACCTCATTGACGAGCC TAGTGCTTACCTGGACTCCGAGCAGCGTATCGTGGCCTCCAGGGTCATCAAGCGTTTCATCATGCACACCAAGAA GACTGCTTTCATCGTCGAGCACGATTTCATCATGGCCACTTATCTCGCCGATCGTGTCATCGTCTTCGATGGTCA GCCCTCCGTCGATGCTCACGCCAACGCCCCTGAGTCCCTGGTCACTGGTTGCAACACTTTCTTGAAGAACCTGGA TGTCACCTTCCGTCGTGACCCCAACAGTTACCGCCCTCGTATTAACAAGTACCAGTCCCAGATGGACCAGGAGCA GAAGTTGGCCGGCAACTACGTAAGTCTACAATCTTTTCACCCCAGTACTTGCACGGTTCGGCCGTGGTAGTATCG TCTCTGTTCTATTGGAAGTATAATACTGACATGTATGTTCCACAGTTCTTCTTGGAAGAAGAGAAATGA |