Fungal Genomics

at Utrecht University

General Properties

Protein IDAni_SJS72_1|g6222.t1
Gene name
Locationscaffold_045:257395..258560
Strand-
Gene length (bp)1165
Transcript length (bp)765
Coding sequence length (bp)765
Protein length (aa) 255

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF04117 Mpv17_PMP22 Mpv17 / PMP22 family 9.6E-19 186 246

GO

GO Term Description Terminal node
GO:0016021 integral component of membrane Yes
GO:0031224 intrinsic component of membrane No
GO:0110165 cellular anatomical entity No
GO:0005575 cellular_component No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 38 0.5

Transmembrane Domains

Domain # Start End Length
1 20 42 22
2 52 74 22
3 130 152 22
4 172 191 19

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ani_SJS72_1|g6222.t1
MFSTSRRRILDGLNRRYIYGRLPLLHAIIFLIEMAAAMRLAAKFNSYYAEKPILTTMVTNAILGGIADTVAQLIT
AFKARGGRRPSDSNDLISIEIHDLDKEKPPALGELGHARHMPPPFDFERLTRFMSYGFFMAPVQFHWFGFLSRAF
PLTKRNPSIPALKRVCVDQLMFAPFGLACFFSFMTVAEGGGRRALTRKFQDVYLPTLKANFVLWPAVQILNFRVV
PIQFQIPFVSSVGIAWTAYLSLTNSSEEE*
Coding >Ani_SJS72_1|g6222.t1
ATGTTCTCCACTAGTCGTCGAAGAATACTCGATGGACTCAATCGGAGGTACATCTACGGCCGTCTGCCATTGCTT
CACGCCATAATCTTTCTCATCGAAATGGCGGCTGCAATGCGACTTGCCGCTAAGTTCAACTCTTACTATGCCGAG
AAACCAATCTTAACCACCATGGTTACCAATGCGATACTTGGTGGGATCGCAGATACGGTCGCACAGTTAATCACG
GCTTTCAAGGCTCGTGGAGGACGCAGGCCCTCTGACAGTAACGATCTTATTTCAATTGAGATCCATGACCTCGAT
AAAGAGAAGCCGCCTGCTCTTGGAGAGCTGGGACATGCTAGACATATGCCGCCGCCCTTCGACTTCGAGCGCCTG
ACTCGCTTTATGTCGTACGGTTTCTTCATGGCCCCGGTTCAGTTCCATTGGTTCGGTTTCTTGTCCAGGGCGTTC
CCCCTTACCAAGAGGAACCCGTCGATTCCCGCGCTGAAGAGAGTGTGCGTGGATCAGCTGATGTTCGCTCCTTTT
GGTCTGGCGTGCTTCTTCTCCTTCATGACGGTTGCAGAGGGAGGAGGAAGGAGAGCCTTGACGCGCAAGTTCCAG
GACGTCTATCTGCCAACCCTCAAGGCCAACTTTGTCCTTTGGCCCGCTGTTCAGATTCTGAACTTCCGTGTCGTA
CCTATCCAGTTCCAGATTCCCTTCGTGTCTTCCGTCGGAATCGCCTGGACTGCGTATCTGTCGCTGACCAACTCT
TCGGAGGAGGAGTAA
Transcript >Ani_SJS72_1|g6222.t1
ATGTTCTCCACTAGTCGTCGAAGAATACTCGATGGACTCAATCGGAGGTACATCTACGGCCGTCTGCCATTGCTT
CACGCCATAATCTTTCTCATCGAAATGGCGGCTGCAATGCGACTTGCCGCTAAGTTCAACTCTTACTATGCCGAG
AAACCAATCTTAACCACCATGGTTACCAATGCGATACTTGGTGGGATCGCAGATACGGTCGCACAGTTAATCACG
GCTTTCAAGGCTCGTGGAGGACGCAGGCCCTCTGACAGTAACGATCTTATTTCAATTGAGATCCATGACCTCGAT
AAAGAGAAGCCGCCTGCTCTTGGAGAGCTGGGACATGCTAGACATATGCCGCCGCCCTTCGACTTCGAGCGCCTG
ACTCGCTTTATGTCGTACGGTTTCTTCATGGCCCCGGTTCAGTTCCATTGGTTCGGTTTCTTGTCCAGGGCGTTC
CCCCTTACCAAGAGGAACCCGTCGATTCCCGCGCTGAAGAGAGTGTGCGTGGATCAGCTGATGTTCGCTCCTTTT
GGTCTGGCGTGCTTCTTCTCCTTCATGACGGTTGCAGAGGGAGGAGGAAGGAGAGCCTTGACGCGCAAGTTCCAG
GACGTCTATCTGCCAACCCTCAAGGCCAACTTTGTCCTTTGGCCCGCTGTTCAGATTCTGAACTTCCGTGTCGTA
CCTATCCAGTTCCAGATTCCCTTCGTGTCTTCCGTCGGAATCGCCTGGACTGCGTATCTGTCGCTGACCAACTCT
TCGGAGGAGGAGTAA
Gene >Ani_SJS72_1|g6222.t1
ATGTTCTCCACTAGTCGTCGAAGAATACTCGATGGACTCAATCGGAGGTACATCTACGGCCGTCTGGTATGTGAA
CTCTTGGTCTCGATTCCATCCTATCTCACCCAAGGGGGTTCTACATTTTTCCTAAAACGAGCAACCTTTATCAAG
TAAACTTTTTCTATGAGGGAACTCATCACTAACTTCACTCCTTCCATTCTTCTCTATTATAGCCATTGCTTCACG
CCATAATCTTTCTCATCGAAATGGCGGCTGCAATGCGACTTGCCGCTAAGTTCAACTCTTACTATGCCGAGAAAC
CAAGTAAGGCTCTCACGCTCCCTTGCTAAGCGCCTTCAGGAGCTGACTGACTTTGTGTCGTCTTTAGTCTTAACC
ACCATGGTTACCAATGCGGTAAGAGTCCCTTCGAGCGAATCATCTGTCATTGGCATATGATCGACTGACGTTGGA
CGGCGCGGTAGATACTTGGTGGGATCGCAGATACGGTCGCACAGTTAATCACGGCTTTCAAGGCTCGTGGAGGAC
GCAGGCCCTCTGACAGTAACGATCTTATTTCAATTGAGATCCATGACCTCGATAAAGAGAAGCCGCCTGCTCTTG
GAGAGCTGGGACATGCTAGACATATGCCGCCGCCCTTCGACTTCGAGCGCCTGACTCGCTTTATGTCGTACGGTT
TCTTCATGGCCCCGGTTCAGTTCCATTGGTTCGGTTTCTTGTCCAGGGCGTTCCCCCTTACCAAGAGGAACCCGT
CGATTCCCGCGCTGAAGAGAGTGTGCGTGGATCAGCTGATGTTCGCTCCTTTTGGTATGAACTGTCTCCGAAGGA
AGAAGAAAGCTCTTTTCTCTTAGCTAATATTATTACCAGGTCTGGCGTGCTTCTTCTCCTTCATGACGGTTGCAG
AGGGAGGAGGAAGGAGAGCCTTGACGCGCAAGTTCCAGGACGTCTATCTGCCAACCCTCAAGGCCAACTTTGTCC
TTTGGCCCGCTGTTCAGATTCTGAACTTCCGTGTCGTACCTATCCAGTTCCAGATTGTGAGTACTATTGTGATAA
AACTCTTGTGCACTGTTATACTGATATTTCTTTTTTCTTCCAGCCCTTCGTGTCTTCCGTCGGAATCGCCTGGAC
TGCGTATCTGTCGCTGACCAACTCTTCGGAGGAGGAGTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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