Fungal Genomics

at Utrecht University

General Properties

Protein ID	Ani_SJS72_1\|g6068.t1
Gene name
Location	scaffold_044:45374..46132
Strand	-
Gene length (bp)	758
Transcript length (bp)	687
Coding sequence length (bp)	687
Protein length (aa)	229

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF01476	LysM	LysM domain	4.5E-12	42	85
PF01476	LysM	LysM domain	1.2E-01	116	141

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
Yes	1 - 16	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Ani_SJS72_1\|g6068.t1 MLAATLLSLSAVAVALPASTYDALPTAGTVINLDITALNETYTVQENDTLSAIAANYGVGTCDLARLNILADPNF IYAGEVLRIPAQPTFPDDLSCFSTNNTEATNTCIDSGPHVYTIMPGDTIQKIANERFNITVESVINQTAQTGYIA ALNPGPYDVLQTGETVKIPICDNTACTMTQFTLGYGTLQDFATYYGVAVGQIMALNLGYNHSEAAVPLGVLYDCS AVN*
Coding	>Ani_SJS72_1\|g6068.t1 ATGCTCGCTGCTACTCTTCTCAGCCTGTCAGCAGTGGCTGTCGCTCTTCCAGCATCCACCTATGATGCCCTCCCA ACCGCCGGAACAGTGATAAACCTAGATATCACCGCTTTGAACGAGACCTACACTGTTCAAGAGAACGACACCCTA TCAGCCATTGCCGCCAATTACGGCGTGGGAACCTGTGATCTCGCCCGGCTGAATATCCTCGCTGATCCCAACTTC ATCTATGCTGGCGAGGTGCTTCGCATTCCTGCTCAACCGACCTTCCCAGATGACCTGAGCTGCTTCAGCACCAAC AATACCGAGGCCACCAACACTTGTATCGATAGTGGTCCCCACGTATATACGATCATGCCTGGAGACACCATTCAG AAGATCGCCAACGAACGATTCAACATCACGGTCGAGTCTGTCATCAACCAGACCGCTCAAACTGGGTATATTGCC GCTCTGAACCCTGGCCCCTATGATGTCCTTCAGACGGGTGAGACGGTGAAGATCCCTATCTGCGACAATACTGCC TGTACTATGACTCAATTTACCTTGGGCTATGGTACCCTGCAAGACTTTGCTACTTACTATGGGGTCGCTGTGGGA CAGATTATGGCGTTGAATTTGGGCTATAACCATTCAGAAGCTGCGGTTCCTTTGGGAGTACTTTACGATTGTAGC GCTGTGAATTAA
Transcript	>Ani_SJS72_1\|g6068.t1 ATGCTCGCTGCTACTCTTCTCAGCCTGTCAGCAGTGGCTGTCGCTCTTCCAGCATCCACCTATGATGCCCTCCCA ACCGCCGGAACAGTGATAAACCTAGATATCACCGCTTTGAACGAGACCTACACTGTTCAAGAGAACGACACCCTA TCAGCCATTGCCGCCAATTACGGCGTGGGAACCTGTGATCTCGCCCGGCTGAATATCCTCGCTGATCCCAACTTC ATCTATGCTGGCGAGGTGCTTCGCATTCCTGCTCAACCGACCTTCCCAGATGACCTGAGCTGCTTCAGCACCAAC AATACCGAGGCCACCAACACTTGTATCGATAGTGGTCCCCACGTATATACGATCATGCCTGGAGACACCATTCAG AAGATCGCCAACGAACGATTCAACATCACGGTCGAGTCTGTCATCAACCAGACCGCTCAAACTGGGTATATTGCC GCTCTGAACCCTGGCCCCTATGATGTCCTTCAGACGGGTGAGACGGTGAAGATCCCTATCTGCGACAATACTGCC TGTACTATGACTCAATTTACCTTGGGCTATGGTACCCTGCAAGACTTTGCTACTTACTATGGGGTCGCTGTGGGA CAGATTATGGCGTTGAATTTGGGCTATAACCATTCAGAAGCTGCGGTTCCTTTGGGAGTACTTTACGATTGTAGC GCTGTGAATTAA
Gene	>Ani_SJS72_1\|g6068.t1 ATGCTCGCTGCTACTCTTCTCAGCCTGTCAGCAGTGGCTGTCGCTCTTCCAGCATCCACCTATGATGGTTTGTTG TCCTTTTATTTTCATTTTTACCTCAGCCAACCTAGCTACGCTAACTCTTCGCACTACCTACAGCCCTCCCAACCG CCGGAACAGTGATAAACCTAGATATCACCGCTTTGAACGAGACCTACACTGTTCAAGAGAACGACACCCTATCAG CCATTGCCGCCAATTACGGCGTGGGAACCTGTGATCTCGCCCGGCTGAATATCCTCGCTGATCCCAACTTCATCT ATGCTGGCGAGGTGCTTCGCATTCCTGCTCAACCGACCTTCCCAGATGACCTGAGCTGCTTCAGCACCAACAATA CCGAGGCCACCAACACTTGTATCGATAGTGGTCCCCACGTATATACGATCATGCCTGGAGACACCATTCAGAAGA TCGCCAACGAACGATTCAACATCACGGTCGAGTCTGTCATCAACCAGACCGCTCAAACTGGGTATATTGCCGCTC TGAACCCTGGCCCCTATGATGTCCTTCAGACGGGTGAGACGGTGAAGATCCCTATCTGCGACAATACTGCCTGTA CTATGACTCAATTTACCTTGGGCTATGGTACCCTGCAAGACTTTGCTACTTACTATGGGGTCGCTGTGGGACAGA TTATGGCGTTGAATTTGGGCTATAACCATTCAGAAGCTGCGGTTCCTTTGGGAGTACTTTACGATTGTAGCGCTG TGAATTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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