© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS72_1|g6022.t1 |
| Gene name | |
| Location | scaffold_043:152625..154097 |
| Strand | - |
| Gene length (bp) | 1472 |
| Transcript length (bp) | 1212 |
| Coding sequence length (bp) | 1212 |
| Protein length (aa) | 404 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00887 | ACBP | Acyl CoA binding protein | 9.9E-23 | 6 | 90 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0000062 | fatty-acyl-CoA binding | Yes |
| GO:1901567 | fatty acid derivative binding | No |
| GO:0005488 | binding | No |
| GO:0032553 | ribonucleotide binding | No |
| GO:0097159 | organic cyclic compound binding | No |
| GO:0017076 | purine nucleotide binding | No |
| GO:0032555 | purine ribonucleotide binding | No |
| GO:1901265 | nucleoside phosphate binding | No |
| GO:0003674 | molecular_function | No |
| GO:0036094 | small molecule binding | No |
| GO:0032559 | adenyl ribonucleotide binding | No |
| GO:1901363 | heterocyclic compound binding | No |
| GO:1901681 | sulfur compound binding | No |
| GO:0120227 | acyl-CoA binding | No |
| GO:0033218 | amide binding | No |
| GO:0097367 | carbohydrate derivative binding | No |
| GO:0000166 | nucleotide binding | No |
| GO:0030554 | adenyl nucleotide binding | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 26 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 332 | 354 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS72_1|g6022.t1 MSDSVDRVFVHALNTVKRIPRTGTARPPASERLKLYGLYKQSMEGDVEGVMDRPVGNTADVFMECEKWDAWHAQR GLSRTEAKRRYISTLIETMHNYASQTAEARELVAELEFVWDQIKSNPSSSSMSSSQEPGSPVASAAVSMRDHARL QPQSSNRLTRPEYEQLLANTARGRGSERLRVLSPVSQAESGFRRQMEEEPAEEEEEEEEEEVYAEAQDNLFENEE GEDDDEEGHMEEEEYNNNHDRHESHDYHQQGYNFPSHQEEYDHDHHHHDTLSRRRPPPPPDDSKRWRRTVEQALT TMTAEIAAVREQLEARALAHRRRTGLWAWLKWLVWVAARQIMVDLALLGMLLIWMRLRGDRRLEEKLKVGWAEVK TRLVLLMVFRRVRRVVSKSSSSADKTSS* |
| Coding | >Ani_SJS72_1|g6022.t1 ATGTCGGATTCAGTGGATCGTGTCTTCGTCCATGCCCTTAACACGGTGAAACGCATTCCCCGCACGGGGACCGCT AGGCCGCCGGCGTCGGAGAGATTGAAGCTCTATGGCTTGTATAAGCAGAGCATGGAAGGCGATGTCGAAGGCGTC ATGGATCGACCGGTCGGGAATACTGCGGATGTGTTTATGGAGTGTGAGAAATGGGACGCATGGCACGCCCAACGA GGTCTCTCCCGCACAGAAGCCAAACGACGCTACATCTCCACCCTCATCGAAACCATGCATAACTACGCTTCCCAA ACAGCCGAGGCAAGGGAACTCGTCGCCGAATTGGAATTCGTTTGGGATCAGATTAAATCCAACCCGTCTTCGTCG TCTATGTCCTCGTCCCAGGAACCGGGTAGTCCGGTGGCTTCTGCAGCGGTGTCGATGCGTGATCACGCGAGGTTA CAGCCGCAGTCTAGTAATAGATTGACTCGTCCGGAGTATGAGCAGCTACTTGCCAATACGGCTAGAGGAAGAGGG AGTGAGAGACTACGGGTGTTAAGTCCGGTTAGTCAGGCGGAGTCAGGGTTTCGGCGACAGATGGAGGAGGAGCCA GCAGAAGAGGAGGAAGAAGAGGAAGAGGAGGAAGTGTACGCGGAAGCACAGGATAATCTATTCGAGAATGAAGAA GGAGAAGATGATGACGAAGAAGGACACATGGAGGAAGAAGAGTACAACAACAATCACGACCGTCACGAATCGCAT GACTATCACCAACAAGGATACAACTTCCCCTCCCACCAGGAAGAATACGATCACGATCACCACCACCATGATACC CTAAGTCGAAGACGACCACCCCCACCCCCCGACGACTCCAAACGCTGGCGTCGCACAGTCGAGCAGGCCTTGACG ACCATGACCGCGGAAATCGCCGCCGTGCGAGAACAACTGGAAGCGCGAGCGTTAGCTCATCGTCGACGAACGGGC CTGTGGGCCTGGCTGAAGTGGTTAGTTTGGGTCGCTGCACGGCAGATCATGGTTGATTTGGCGCTGCTGGGTATG CTTCTTATTTGGATGAGACTGCGAGGAGATCGCAGGTTGGAGGAGAAGTTGAAGGTGGGTTGGGCGGAGGTGAAG ACGAGGTTGGTGTTGTTGATGGTGTTCAGGAGGGTTAGGAGGGTGGTGTCTAAATCTTCTTCTTCTGCTGATAAG ACCTCGTCGTGA |
| Transcript | >Ani_SJS72_1|g6022.t1 ATGTCGGATTCAGTGGATCGTGTCTTCGTCCATGCCCTTAACACGGTGAAACGCATTCCCCGCACGGGGACCGCT AGGCCGCCGGCGTCGGAGAGATTGAAGCTCTATGGCTTGTATAAGCAGAGCATGGAAGGCGATGTCGAAGGCGTC ATGGATCGACCGGTCGGGAATACTGCGGATGTGTTTATGGAGTGTGAGAAATGGGACGCATGGCACGCCCAACGA GGTCTCTCCCGCACAGAAGCCAAACGACGCTACATCTCCACCCTCATCGAAACCATGCATAACTACGCTTCCCAA ACAGCCGAGGCAAGGGAACTCGTCGCCGAATTGGAATTCGTTTGGGATCAGATTAAATCCAACCCGTCTTCGTCG TCTATGTCCTCGTCCCAGGAACCGGGTAGTCCGGTGGCTTCTGCAGCGGTGTCGATGCGTGATCACGCGAGGTTA CAGCCGCAGTCTAGTAATAGATTGACTCGTCCGGAGTATGAGCAGCTACTTGCCAATACGGCTAGAGGAAGAGGG AGTGAGAGACTACGGGTGTTAAGTCCGGTTAGTCAGGCGGAGTCAGGGTTTCGGCGACAGATGGAGGAGGAGCCA GCAGAAGAGGAGGAAGAAGAGGAAGAGGAGGAAGTGTACGCGGAAGCACAGGATAATCTATTCGAGAATGAAGAA GGAGAAGATGATGACGAAGAAGGACACATGGAGGAAGAAGAGTACAACAACAATCACGACCGTCACGAATCGCAT GACTATCACCAACAAGGATACAACTTCCCCTCCCACCAGGAAGAATACGATCACGATCACCACCACCATGATACC CTAAGTCGAAGACGACCACCCCCACCCCCCGACGACTCCAAACGCTGGCGTCGCACAGTCGAGCAGGCCTTGACG ACCATGACCGCGGAAATCGCCGCCGTGCGAGAACAACTGGAAGCGCGAGCGTTAGCTCATCGTCGACGAACGGGC CTGTGGGCCTGGCTGAAGTGGTTAGTTTGGGTCGCTGCACGGCAGATCATGGTTGATTTGGCGCTGCTGGGTATG CTTCTTATTTGGATGAGACTGCGAGGAGATCGCAGGTTGGAGGAGAAGTTGAAGGTGGGTTGGGCGGAGGTGAAG ACGAGGTTGGTGTTGTTGATGGTGTTCAGGAGGGTTAGGAGGGTGGTGTCTAAATCTTCTTCTTCTGCTGATAAG ACCTCGTCGTGA |
| Gene | >Ani_SJS72_1|g6022.t1 ATGTCGGATTCAGTGGGTGCGTTTACCCCGGAAGGAATATACAATATGATGAAGAATGAGAGGAAGGAACAGAAG TGTATTAGGGAGATCATGTGCTGATTGATATGGTTCAGATCGTGTCTTCGTCCATGCCCTTAACACGGTGAAACG CATTCCCCGCACGGGGACCGCTAGGCCGCCGGCGTCGGAGAGATTGAAGCTCTATGGCTTGTATAAGCAGAGCAT GGGTATTTCTCCCCTCCTTTCACTTTCTTTATTGGGGCATTGTCTGTGTTGGACATTGGATGATAATGTAATGGT CATGCTGACGAGTACTTAATTGGAACTTGTAGAAGGCGATGTCGAAGGCGTCATGGATCGACCGGTCGGGAATAC TGCGGATGTGTTTATGGAGTGTGAGAAATGGTACATCTACCCTCCCGAGCTTTCTCTTCTATATGCTATCAGTGT ACTAATAATGTAGGGACGCATGGCACGCCCAACGAGGTCTCTCCCGCACAGAAGCCAAACGACGCTACATCTCCA CCCTCATCGAAACCATGCATAACTACGCTTCCCAAACAGCCGAGGCAAGGGAACTCGTCGCCGAATTGGAATTCG TTTGGGATCAGATTAAATCCAACCCGTCTTCGTCGTCTATGTCCTCGTCCCAGGAACCGGGTAGTCCGGTGGCTT CTGCAGCGGTGTCGATGCGTGATCACGCGAGGTTACAGCCGCAGTCTAGTAATAGATTGACTCGTCCGGAGTATG AGCAGCTACTTGCCAATACGGCTAGAGGAAGAGGGAGTGAGAGACTACGGGTGTTAAGTCCGGTTAGTCAGGCGG AGTCAGGGTTTCGGCGACAGATGGAGGAGGAGCCAGCAGAAGAGGAGGAAGAAGAGGAAGAGGAGGAAGTGTACG CGGAAGCACAGGATAATCTATTCGAGAATGAAGAAGGAGAAGATGATGACGAAGAAGGACACATGGAGGAAGAAG AGTACAACAACAATCACGACCGTCACGAATCGCATGACTATCACCAACAAGGATACAACTTCCCCTCCCACCAGG AAGAATACGATCACGATCACCACCACCATGATACCCTAAGTCGAAGACGACCACCCCCACCCCCCGACGACTCCA AACGCTGGCGTCGCACAGTCGAGCAGGCCTTGACGACCATGACCGCGGAAATCGCCGCCGTGCGAGAACAACTGG AAGCGCGAGCGTTAGCTCATCGTCGACGAACGGGCCTGTGGGCCTGGCTGAAGTGGTTAGTTTGGGTCGCTGCAC GGCAGATCATGGTTGATTTGGCGCTGCTGGGTATGCTTCTTATTTGGATGAGACTGCGAGGAGATCGCAGGTTGG AGGAGAAGTTGAAGGTGGGTTGGGCGGAGGTGAAGACGAGGTTGGTGTTGTTGATGGTGTTCAGGAGGGTTAGGA GGGTGGTGTCTAAATCTTCTTCTTCTGCTGATAAGACCTCGTCGTGA |