Fungal Genomics

at Utrecht University

General Properties

Protein IDAni_SJS72_1|g6018.t1
Gene name
Locationscaffold_043:145056..145910
Strand-
Gene length (bp)854
Transcript length (bp)792
Coding sequence length (bp)792
Protein length (aa) 264

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF04588 HIG_1_N Hypoxia induced protein conserved region 2.5E-09 120 164

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 62 0.5

Transmembrane Domains

Domain # Start End Length
1 20 39 19
2 117 136 19
3 151 168 17

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ani_SJS72_1|g6018.t1
MKILTKEEEDAHYREVVKGGTIGGLIGLVGGAAGVLAATRRYQTIRNLTLPMKSFLVTSSGTFVGIISADHASRS
FEAQRNASRQWYENREERLRQEELSHLSPIDRALQWARREKYKIVGATWVASMIGSFAMVNRNKHLSGSQKIVQA
RVYAQGLTLAVLVASAAFEIQDQRKGRGLLQDKMKAEKQAAEERKNSEQEHTGDLWKDMVAAEEDRLRKRKMSLS
ESDYLHPHNNGQEKKVEEVKEEKEEEPKKEEATEKKKE*
Coding >Ani_SJS72_1|g6018.t1
ATGAAGATCCTCACTAAAGAAGAAGAAGATGCTCACTACCGCGAGGTCGTCAAGGGCGGCACCATCGGTGGTCTC
ATCGGTCTGGTCGGCGGCGCAGCAGGTGTCCTCGCCGCCACCAGGCGCTACCAGACAATTCGCAACCTCACTCTC
CCCATGAAGTCCTTCCTCGTGACCTCCTCCGGTACCTTCGTGGGTATCATCAGCGCCGACCATGCCTCTCGCAGC
TTCGAAGCCCAACGCAACGCCAGTCGCCAATGGTACGAGAACCGCGAGGAGCGTCTCCGTCAGGAAGAATTGTCG
CACCTCTCCCCGATCGATCGCGCTCTGCAGTGGGCCCGTCGCGAGAAGTACAAGATCGTCGGTGCCACATGGGTG
GCTAGTATGATCGGTAGTTTCGCCATGGTTAACCGGAACAAGCACCTCAGTGGCTCGCAGAAGATTGTCCAGGCG
AGAGTTTACGCCCAGGGCTTGACCCTCGCTGTGTTGGTGGCCAGTGCGGCGTTTGAGATCCAGGATCAGAGGAAG
GGTCGCGGCTTGCTGCAGGATAAGATGAAGGCCGAGAAGCAGGCTGCTGAGGAGAGGAAGAATTCTGAGCAGGAG
CACACCGGTGATCTGTGGAAGGACATGGTTGCTGCCGAGGAGGATAGGTTGAGGAAGAGGAAGATGAGTCTGTCG
GAGTCGGATTACTTGCACCCTCATAATAATGGGCAGGAGAAGAAGGTTGAGGAGGTGAAGGAAGAGAAGGAGGAA
GAGCCTAAGAAGGAAGAGGCGACGGAGAAGAAGAAAGAGTAA
Transcript >Ani_SJS72_1|g6018.t1
ATGAAGATCCTCACTAAAGAAGAAGAAGATGCTCACTACCGCGAGGTCGTCAAGGGCGGCACCATCGGTGGTCTC
ATCGGTCTGGTCGGCGGCGCAGCAGGTGTCCTCGCCGCCACCAGGCGCTACCAGACAATTCGCAACCTCACTCTC
CCCATGAAGTCCTTCCTCGTGACCTCCTCCGGTACCTTCGTGGGTATCATCAGCGCCGACCATGCCTCTCGCAGC
TTCGAAGCCCAACGCAACGCCAGTCGCCAATGGTACGAGAACCGCGAGGAGCGTCTCCGTCAGGAAGAATTGTCG
CACCTCTCCCCGATCGATCGCGCTCTGCAGTGGGCCCGTCGCGAGAAGTACAAGATCGTCGGTGCCACATGGGTG
GCTAGTATGATCGGTAGTTTCGCCATGGTTAACCGGAACAAGCACCTCAGTGGCTCGCAGAAGATTGTCCAGGCG
AGAGTTTACGCCCAGGGCTTGACCCTCGCTGTGTTGGTGGCCAGTGCGGCGTTTGAGATCCAGGATCAGAGGAAG
GGTCGCGGCTTGCTGCAGGATAAGATGAAGGCCGAGAAGCAGGCTGCTGAGGAGAGGAAGAATTCTGAGCAGGAG
CACACCGGTGATCTGTGGAAGGACATGGTTGCTGCCGAGGAGGATAGGTTGAGGAAGAGGAAGATGAGTCTGTCG
GAGTCGGATTACTTGCACCCTCATAATAATGGGCAGGAGAAGAAGGTTGAGGAGGTGAAGGAAGAGAAGGAGGAA
GAGCCTAAGAAGGAAGAGGCGACGGAGAAGAAGAAAGAGTAA
Gene >Ani_SJS72_1|g6018.t1
ATGAAGATCCTCACTAAAGAAGAAGAAGATGCTCACTACCGGTACTTCCGCCCTCCCCGCCACCCAATTTCCGAA
CAAAGTAACTAACCCAGCAACTTTCCAGCGAGGTCGTCAAGGGCGGCACCATCGGTGGTCTCATCGGTCTGGTCG
GCGGCGCAGCAGGTGTCCTCGCCGCCACCAGGCGCTACCAGACAATTCGCAACCTCACTCTCCCCATGAAGTCCT
TCCTCGTGACCTCCTCCGGTACCTTCGTGGGTATCATCAGCGCCGACCATGCCTCTCGCAGCTTCGAAGCCCAAC
GCAACGCCAGTCGCCAATGGTACGAGAACCGCGAGGAGCGTCTCCGTCAGGAAGAATTGTCGCACCTCTCCCCGA
TCGATCGCGCTCTGCAGTGGGCCCGTCGCGAGAAGTACAAGATCGTCGGTGCCACATGGGTGGCTAGTATGATCG
GTAGTTTCGCCATGGTTAACCGGAACAAGCACCTCAGTGGCTCGCAGAAGATTGTCCAGGCGAGAGTTTACGCCC
AGGGCTTGACCCTCGCTGTGTTGGTGGCCAGTGCGGCGTTTGAGATCCAGGATCAGAGGAAGGGTCGCGGCTTGC
TGCAGGATAAGATGAAGGCCGAGAAGCAGGCTGCTGAGGAGAGGAAGAATTCTGAGCAGGAGCACACCGGTGATC
TGTGGAAGGACATGGTTGCTGCCGAGGAGGATAGGTTGAGGAAGAGGAAGATGAGTCTGTCGGAGTCGGATTACT
TGCACCCTCATAATAATGGGCAGGAGAAGAAGGTTGAGGAGGTGAAGGAAGAGAAGGAGGAAGAGCCTAAGAAGG
AAGAGGCGACGGAGAAGAAGAAAGAGTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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