Fungal Genomics

at Utrecht University

General Properties

Protein IDAni_SJS72_1|g5948.t1
Gene name
Locationscaffold_042:236072..237601
Strand+
Gene length (bp)1529
Transcript length (bp)1476
Coding sequence length (bp)1476
Protein length (aa) 492

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF02055 Glyco_hydro_30 Glycosyl hydrolase family 30 TIM-barrel domain 7.2E-32 74 416
PF17189 Glyco_hydro_30C Glycosyl hydrolase family 30 beta sandwich domain 3.6E-07 432 484

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 19 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ani_SJS72_1|g5948.t1
MSWMLWYTIAGLASLGHASLEKRATDASAYCSDSSGTYKLSSITAPVQGSGSPGSASTWKLSIDDTSSGHKQAIT
GFGAAVTDATVTSFNTLSSSTLQQLLNELMTSDGANFSLMRHTIGASDLSGDPVYTYDDNGNEADPSLSGFGLGD
RGTAMAEMLATMKSLQSDLKVLGSPWSAPGWMKLNGVIDGNATDNNLNDGYLTSGGTGSTGYSSAFAQYFVKYIQ
AYEALGATVDAITIQNEPLNSQSGYPTMYVYDYESAQLIQKYIGPALADAGLSTEIWAFDHNTDHASYPQTVLDE
ASQYVDTVAWHCYAKDVDWTVLSQFYSANPGVKQYMTECWTPASGSWHQAADFTMGPLQNYASGVMAWTLGTNTD
DGPHLTSGGCDACQGLVTINDDDSYTLNTAYYMMAQFSKFMPPGATVLNGTGSYTYSGGDGVQSVASLNPDGTRT
VIIENIFSNDIYLTLSTESGEEWSGNIPSESVTTWVLPALS*
Coding >Ani_SJS72_1|g5948.t1
ATGAGTTGGATGTTGTGGTATACTATAGCTGGCCTAGCATCTCTAGGCCATGCTTCTCTTGAGAAACGCGCCACC
GATGCATCTGCGTACTGCTCCGATTCATCGGGTACCTACAAGCTCTCGTCGATCACGGCCCCAGTTCAGGGAAGT
GGCAGCCCGGGCTCAGCATCCACCTGGAAGCTAAGTATTGACGATACATCATCCGGTCACAAGCAGGCAATCACT
GGCTTCGGGGCTGCTGTGACCGATGCGACCGTCACGTCTTTTAACACCTTGTCGAGCTCTACCCTCCAACAGCTC
CTCAATGAGTTGATGACTTCCGATGGAGCTAATTTCTCTCTCATGCGCCATACCATCGGCGCGTCTGATCTGTCC
GGTGATCCGGTCTACACCTATGATGACAACGGAAACGAAGCAGACCCCTCACTTTCCGGCTTCGGTCTCGGCGAC
CGTGGCACTGCTATGGCGGAAATGTTGGCCACGATGAAATCGTTGCAGTCAGACCTGAAGGTGCTTGGGTCCCCG
TGGAGTGCGCCCGGATGGATGAAATTGAATGGCGTGATTGATGGCAACGCGACTGATAACAACCTTAACGATGGC
TACCTTACCAGTGGTGGCACGGGAAGCACCGGCTACTCCAGTGCTTTCGCGCAGTACTTCGTGAAATACATCCAA
GCGTACGAAGCATTAGGAGCTACGGTCGATGCCATTACGATTCAGAATGAGCCGTTAAATAGTCAATCTGGATAT
CCCACCATGTATGTTTACGACTATGAGTCTGCGCAGCTGATCCAAAAATACATTGGACCGGCTCTTGCCGACGCT
GGACTGAGCACGGAAATCTGGGCCTTCGATCACAATACTGATCACGCATCGTACCCTCAGACTGTGCTTGATGAA
GCAAGTCAATACGTCGACACGGTAGCCTGGCACTGTTATGCAAAGGATGTTGACTGGACTGTTCTCAGCCAGTTC
TACAGCGCCAACCCTGGGGTCAAGCAATATATGACCGAATGCTGGACACCAGCTTCCGGATCATGGCACCAGGCT
GCTGATTTTACCATGGGCCCTCTGCAGAACTATGCGTCGGGGGTCATGGCGTGGACTCTGGGCACGAACACTGAC
GACGGTCCGCATTTGACCAGTGGTGGATGCGACGCCTGTCAGGGCTTGGTCACCATCAACGATGATGACAGCTAT
ACTCTTAATACTGCCTACTACATGATGGCACAGTTTAGCAAGTTCATGCCTCCTGGCGCGACCGTGTTGAACGGA
ACGGGGAGCTATACCTACTCGGGTGGCGATGGCGTACAGTCGGTGGCGTCCCTGAACCCTGATGGAACGCGCACA
GTCATTATTGAGAATATATTCAGTAACGATATTTACTTGACTCTGTCGACGGAGAGCGGAGAGGAGTGGAGTGGA
AATATCCCCAGTGAATCGGTGACTACTTGGGTCCTTCCGGCCTTGTCTTGA
Transcript >Ani_SJS72_1|g5948.t1
ATGAGTTGGATGTTGTGGTATACTATAGCTGGCCTAGCATCTCTAGGCCATGCTTCTCTTGAGAAACGCGCCACC
GATGCATCTGCGTACTGCTCCGATTCATCGGGTACCTACAAGCTCTCGTCGATCACGGCCCCAGTTCAGGGAAGT
GGCAGCCCGGGCTCAGCATCCACCTGGAAGCTAAGTATTGACGATACATCATCCGGTCACAAGCAGGCAATCACT
GGCTTCGGGGCTGCTGTGACCGATGCGACCGTCACGTCTTTTAACACCTTGTCGAGCTCTACCCTCCAACAGCTC
CTCAATGAGTTGATGACTTCCGATGGAGCTAATTTCTCTCTCATGCGCCATACCATCGGCGCGTCTGATCTGTCC
GGTGATCCGGTCTACACCTATGATGACAACGGAAACGAAGCAGACCCCTCACTTTCCGGCTTCGGTCTCGGCGAC
CGTGGCACTGCTATGGCGGAAATGTTGGCCACGATGAAATCGTTGCAGTCAGACCTGAAGGTGCTTGGGTCCCCG
TGGAGTGCGCCCGGATGGATGAAATTGAATGGCGTGATTGATGGCAACGCGACTGATAACAACCTTAACGATGGC
TACCTTACCAGTGGTGGCACGGGAAGCACCGGCTACTCCAGTGCTTTCGCGCAGTACTTCGTGAAATACATCCAA
GCGTACGAAGCATTAGGAGCTACGGTCGATGCCATTACGATTCAGAATGAGCCGTTAAATAGTCAATCTGGATAT
CCCACCATGTATGTTTACGACTATGAGTCTGCGCAGCTGATCCAAAAATACATTGGACCGGCTCTTGCCGACGCT
GGACTGAGCACGGAAATCTGGGCCTTCGATCACAATACTGATCACGCATCGTACCCTCAGACTGTGCTTGATGAA
GCAAGTCAATACGTCGACACGGTAGCCTGGCACTGTTATGCAAAGGATGTTGACTGGACTGTTCTCAGCCAGTTC
TACAGCGCCAACCCTGGGGTCAAGCAATATATGACCGAATGCTGGACACCAGCTTCCGGATCATGGCACCAGGCT
GCTGATTTTACCATGGGCCCTCTGCAGAACTATGCGTCGGGGGTCATGGCGTGGACTCTGGGCACGAACACTGAC
GACGGTCCGCATTTGACCAGTGGTGGATGCGACGCCTGTCAGGGCTTGGTCACCATCAACGATGATGACAGCTAT
ACTCTTAATACTGCCTACTACATGATGGCACAGTTTAGCAAGTTCATGCCTCCTGGCGCGACCGTGTTGAACGGA
ACGGGGAGCTATACCTACTCGGGTGGCGATGGCGTACAGTCGGTGGCGTCCCTGAACCCTGATGGAACGCGCACA
GTCATTATTGAGAATATATTCAGTAACGATATTTACTTGACTCTGTCGACGGAGAGCGGAGAGGAGTGGAGTGGA
AATATCCCCAGTGAATCGGTGACTACTTGGGTCCTTCCGGCCTTGTCTTGA
Gene >Ani_SJS72_1|g5948.t1
ATGAGTTGGATGTTGTGGTATACTATAGCTGGCCTAGCATCTCTAGGCCATGCTTCTCTTGAGAAACGCGCCACC
GATGCATCTGCGTACTGCTCCGATTCATCGGGTACCTACAAGCTCTCGTCGATCACGGCCCCAGTTCAGGGAAGT
GGCAGCCCGGGCTCAGCATCCACCTGGAAGCTAAGTATTGACGATACATCATCCGGTCACAAGCAGGCAATCACT
GGCTTCGGGGCTGCTGTGACCGATGCGACCGTCACGTCTTTTAACACCTTGTCGAGCTCTACCCTCCAACAGCTC
CTCAATGAGTTGATGACTTCCGATGGAGCTAATTTCTCTCTCATGCGCCATACCATCGGCGCGTCTGATCTGTCC
GGTGATCCGGTCTACACCTATGATGACAACGGAAACGAAGCAGACCCCTCACTTTCCGGCTTCGGTCTCGGCGAC
CGTGGCACTGCTATGGCGGAAATGTTGGCCACGATGAAATCGTTGCAGTCAGACCTGAAGGTGCTTGGGTCCCCG
TGGAGTGCGCCCGGATGGATGAAATTGAATGGCGTGATTGATGGCAACGCGACTGATAACAACCTTAACGATGGC
TACCTTACCAGTGGTGGCACGGGAAGCACCGGCTACTCCAGTGCTTTCGCGCAGTACTTCGTGAAATACATCCAA
GCGTACGAAGCATTAGGAGCTACGGTCGATGCCATTACGATTCAGAATGAGCCGTTAAATAGTCAATCTGGATAT
CCCACCATGTATGTTTACGACTATGAGTCTGCGCAGCTGATCCAAAAATACATTGGACCGGCTCTTGCCGACGCT
GGACTGAGCACGGAAATCTGGGCCTTCGATCACAATACTGGCAAGTACCCCATTCTCGACAATCATTGACAACTG
CTAATAATCGACATCCAGATCACGCATCGTACCCTCAGACTGTGCTTGATGAAGCAAGTCAATACGTCGACACGG
TAGCCTGGCACTGTTATGCAAAGGATGTTGACTGGACTGTTCTCAGCCAGTTCTACAGCGCCAACCCTGGGGTCA
AGCAATATATGACCGAATGCTGGACACCAGCTTCCGGATCATGGCACCAGGCTGCTGATTTTACCATGGGCCCTC
TGCAGAACTATGCGTCGGGGGTCATGGCGTGGACTCTGGGCACGAACACTGACGACGGTCCGCATTTGACCAGTG
GTGGATGCGACGCCTGTCAGGGCTTGGTCACCATCAACGATGATGACAGCTATACTCTTAATACTGCCTACTACA
TGATGGCACAGTTTAGCAAGTTCATGCCTCCTGGCGCGACCGTGTTGAACGGAACGGGGAGCTATACCTACTCGG
GTGGCGATGGCGTACAGTCGGTGGCGTCCCTGAACCCTGATGGAACGCGCACAGTCATTATTGAGAATATATTCA
GTAACGATATTTACTTGACTCTGTCGACGGAGAGCGGAGAGGAGTGGAGTGGAAATATCCCCAGTGAATCGGTGA
CTACTTGGGTCCTTCCGGCCTTGTCTTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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