Protein ID | Ani_SJS72_1|g5942.t1 |
Gene name | |
Location | scaffold_042:211633..213725 |
Strand | - |
Gene length (bp) | 2092 |
Transcript length (bp) | 1797 |
Coding sequence length (bp) | 1797 |
Protein length (aa) | 599 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF01490 | Aa_trans | Transmembrane amino acid transporter protein | 5.3E-28 | 137 | 510 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 12 | 0.45 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 138 | 160 | 22 |
2 | 165 | 187 | 22 |
3 | 218 | 240 | 22 |
4 | 250 | 269 | 19 |
5 | 281 | 303 | 22 |
6 | 348 | 365 | 17 |
7 | 372 | 394 | 22 |
8 | 414 | 436 | 22 |
9 | 463 | 485 | 22 |
10 | 490 | 512 | 22 |
11 | 550 | 572 | 22 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS72_1|g5942.t1 MATEIEPAEIPPVLGVLPAYGQDKETPLRMVPRADGVRARLDPNVTLEEYMYWAKIERQLEEEENRQYVLERGPL TVGKVIQNRFSKGVHHEKEKKGAQNSPQIEGEKGMVASTPSDSSLAVTDEEWRTAARALRTASWGTVFYLITTDV LGWANAPFVFASVGYGPAVALFIVFGCFAGFSGWILWKVFLELDSTRYPLINFGDTYYRVFGAWSRHLVNIGQSL QLLMSVSVLVLGNGQILSQLSNESICFVACMIIMMVIGMVCGSIRSLQRLGWLTNAAVWLNIADFIMIMVAAGGH FGIDYQAVISSTLIQVVEPVKVFAGPPPDKYQIQATGFSGQFTGVDQMVYSYGGAILFVAFLAEMRHPWDFWKGL LCAQMFICFVYIFFGAFVYSFYGQYSISNLYNVVEPKGLQMAVNIVYFLTSIIACILYFNIGMKSIYQQVFMELL NFPDISTTRGRMLWYGLGPIYWVIAFVIAAAVPNFSGISSMVGAALILNFTYTLPGILYVGFRCQKDAALPGEGY DPATGETVRHDSGMQRYIRGFKKHWVLNLFCIFYFCGGLACSGMGMWAAIESLIEVFGPGGTVATSFGCAAPV* |
Coding | >Ani_SJS72_1|g5942.t1 ATGGCCACAGAAATCGAGCCGGCCGAGATCCCTCCCGTGCTGGGAGTCCTCCCAGCATACGGACAGGATAAAGAA ACCCCCCTGAGGATGGTGCCACGTGCCGATGGTGTTCGCGCTCGCTTAGATCCGAACGTCACCCTCGAGGAGTAC ATGTACTGGGCCAAGATCGAGCGTCAGCTGGAAGAGGAAGAGAACCGCCAGTACGTGCTGGAGCGCGGGCCTCTG ACCGTCGGCAAGGTCATCCAGAACCGTTTCTCCAAGGGCGTCCACCATGAGAAGGAGAAGAAAGGCGCCCAGAAT AGCCCGCAGATCGAAGGTGAAAAGGGCATGGTCGCATCCACTCCCTCAGATTCGTCCCTAGCTGTTACCGATGAG GAATGGAGAACTGCAGCTCGCGCCCTCCGAACAGCCAGTTGGGGTACCGTCTTCTACTTGATTACCACCGACGTG CTAGGCTGGGCAAACGCACCGTTCGTCTTTGCAAGTGTGGGATACGGTCCTGCCGTGGCTTTGTTCATTGTTTTT GGTTGCTTCGCCGGCTTCAGTGGCTGGATTCTGTGGAAGGTGTTTCTAGAACTCGACTCAACGCGCTACCCCTTG ATCAACTTTGGTGACACCTACTATCGTGTTTTTGGAGCTTGGAGTCGTCATTTGGTCAACATCGGACAGTCGCTG CAGCTGCTGATGTCGGTGTCCGTGCTTGTTCTGGGTAACGGCCAGATCCTGTCGCAGCTGTCCAATGAAAGTATC TGTTTCGTGGCGTGCATGATTATCATGATGGTCATCGGCATGGTCTGTGGAAGCATTCGGTCCTTGCAGCGTCTC GGATGGCTGACCAACGCTGCCGTCTGGTTGAACATTGCGGACTTCATCATGATCATGGTCGCTGCTGGTGGCCAC TTTGGTATCGACTATCAGGCCGTCATCTCATCCACCTTGATCCAGGTCGTCGAGCCCGTCAAGGTCTTCGCTGGG CCACCGCCCGACAAGTATCAGATTCAGGCGACAGGGTTCTCGGGACAATTCACTGGTGTCGACCAGATGGTTTAC AGCTACGGTGGTGCTATTTTATTTGTTGCCTTCCTGGCTGAAATGCGCCATCCGTGGGACTTCTGGAAGGGATTG TTGTGCGCCCAGATGTTCATTTGTTTTGTCTACATCTTCTTCGGTGCCTTTGTCTACAGCTTCTACGGCCAATAC TCCATCTCCAACCTTTACAACGTGGTTGAGCCGAAAGGTCTACAAATGGCAGTAAATATAGTCTACTTTTTAACA TCCATTATTGCCTGCATTCTCTACTTCAATATCGGCATGAAGTCCATCTACCAACAGGTCTTTATGGAGCTTCTC AACTTCCCAGATATCTCCACCACCCGCGGCCGCATGCTCTGGTACGGTCTCGGCCCGATCTACTGGGTGATTGCG TTCGTCATCGCCGCTGCCGTGCCAAACTTTAGTGGAATTTCCAGCATGGTCGGCGCGGCCCTGATCCTCAACTTC ACCTACACGCTCCCGGGTATTCTATACGTTGGTTTCCGATGCCAGAAGGATGCTGCGCTACCCGGAGAGGGGTAT GATCCTGCGACCGGGGAGACGGTGCGCCATGATTCCGGCATGCAGCGGTATATCCGTGGGTTCAAGAAGCACTGG GTGCTGAATCTTTTCTGTATCTTCTACTTCTGTGGTGGATTGGCGTGTTCTGGTATGGGCATGTGGGCTGCCATT GAGAGTTTGATTGAGGTGTTTGGGCCCGGGGGTACGGTGGCTACGTCTTTTGGGTGTGCTGCACCTGTTTAG |
Transcript | >Ani_SJS72_1|g5942.t1 ATGGCCACAGAAATCGAGCCGGCCGAGATCCCTCCCGTGCTGGGAGTCCTCCCAGCATACGGACAGGATAAAGAA ACCCCCCTGAGGATGGTGCCACGTGCCGATGGTGTTCGCGCTCGCTTAGATCCGAACGTCACCCTCGAGGAGTAC ATGTACTGGGCCAAGATCGAGCGTCAGCTGGAAGAGGAAGAGAACCGCCAGTACGTGCTGGAGCGCGGGCCTCTG ACCGTCGGCAAGGTCATCCAGAACCGTTTCTCCAAGGGCGTCCACCATGAGAAGGAGAAGAAAGGCGCCCAGAAT AGCCCGCAGATCGAAGGTGAAAAGGGCATGGTCGCATCCACTCCCTCAGATTCGTCCCTAGCTGTTACCGATGAG GAATGGAGAACTGCAGCTCGCGCCCTCCGAACAGCCAGTTGGGGTACCGTCTTCTACTTGATTACCACCGACGTG CTAGGCTGGGCAAACGCACCGTTCGTCTTTGCAAGTGTGGGATACGGTCCTGCCGTGGCTTTGTTCATTGTTTTT GGTTGCTTCGCCGGCTTCAGTGGCTGGATTCTGTGGAAGGTGTTTCTAGAACTCGACTCAACGCGCTACCCCTTG ATCAACTTTGGTGACACCTACTATCGTGTTTTTGGAGCTTGGAGTCGTCATTTGGTCAACATCGGACAGTCGCTG CAGCTGCTGATGTCGGTGTCCGTGCTTGTTCTGGGTAACGGCCAGATCCTGTCGCAGCTGTCCAATGAAAGTATC TGTTTCGTGGCGTGCATGATTATCATGATGGTCATCGGCATGGTCTGTGGAAGCATTCGGTCCTTGCAGCGTCTC GGATGGCTGACCAACGCTGCCGTCTGGTTGAACATTGCGGACTTCATCATGATCATGGTCGCTGCTGGTGGCCAC TTTGGTATCGACTATCAGGCCGTCATCTCATCCACCTTGATCCAGGTCGTCGAGCCCGTCAAGGTCTTCGCTGGG CCACCGCCCGACAAGTATCAGATTCAGGCGACAGGGTTCTCGGGACAATTCACTGGTGTCGACCAGATGGTTTAC AGCTACGGTGGTGCTATTTTATTTGTTGCCTTCCTGGCTGAAATGCGCCATCCGTGGGACTTCTGGAAGGGATTG TTGTGCGCCCAGATGTTCATTTGTTTTGTCTACATCTTCTTCGGTGCCTTTGTCTACAGCTTCTACGGCCAATAC TCCATCTCCAACCTTTACAACGTGGTTGAGCCGAAAGGTCTACAAATGGCAGTAAATATAGTCTACTTTTTAACA TCCATTATTGCCTGCATTCTCTACTTCAATATCGGCATGAAGTCCATCTACCAACAGGTCTTTATGGAGCTTCTC AACTTCCCAGATATCTCCACCACCCGCGGCCGCATGCTCTGGTACGGTCTCGGCCCGATCTACTGGGTGATTGCG TTCGTCATCGCCGCTGCCGTGCCAAACTTTAGTGGAATTTCCAGCATGGTCGGCGCGGCCCTGATCCTCAACTTC ACCTACACGCTCCCGGGTATTCTATACGTTGGTTTCCGATGCCAGAAGGATGCTGCGCTACCCGGAGAGGGGTAT GATCCTGCGACCGGGGAGACGGTGCGCCATGATTCCGGCATGCAGCGGTATATCCGTGGGTTCAAGAAGCACTGG GTGCTGAATCTTTTCTGTATCTTCTACTTCTGTGGTGGATTGGCGTGTTCTGGTATGGGCATGTGGGCTGCCATT GAGAGTTTGATTGAGGTGTTTGGGCCCGGGGGTACGGTGGCTACGTCTTTTGGGTGTGCTGCACCTGTTTAG |
Gene | >Ani_SJS72_1|g5942.t1 ATGGCCACAGAAATCGAGCCGGCCGAGATCCCTCCCGTGCTGGGAGTCCTCCCAGCATACGGACAGGATAAAGAA ACCCCCCTGAGGATGGTGCCACGTGCCGATGGTGTTCGCGCTCGCTTAGATCCGAACGTCACCCTCGAGGAGTAC ATGTACTGGGCCAAGATCGAGCGTCAGCTGGAAGAGGAAGAGAACCGCCAGTACGTGCTGGAGCGCGGGCCTCTG ACCGTCGGCAAGGTCATCCAGAACCGTTTCTCCAAGGGCGTCCACCATGAGAAGGAGAAGAAAGGCGCCCAGAAT AGCCCGCAGATCGAAGGTGAAAAGGGCATGGTCGCATCCACTCCCTCAGATTCGTCCCTAGCTGTTACCGATGAG GAATGGAGAACTGCAGCTCGCGCCCTCCGAACAGCCAGTTGGGGTACCGTCTTCTACTTGATTACCACCGACGTG CTAGGCTGGGCAAACGCACCGTAAGTAATTCTCAACCCGTCGAAACCAATGACCATCTCGCATAACATTAACCGG GTGGTTCTGTGATCTAGGTTCGTCTTTGCAAGTGTGGGATACGGTCCTGCCGTGGCTTTGTTCATTGTTTTTGGT TGCTTCGCCGGCTTCAGTGGCTGGATTCTGTGGAAGGTGTTTCTAGAACTCGACTCAACGCGCTACCCCTTGATC AACTTTGGTGACACCTACTATCGTGTTTTTGGAGCTTGGAGTCGTCATTTGGTCAACATCGGACAGTCGCTGCAG CTGCTGATGTCGGTGTCCGTGCTTGTTCTGGGTAACGGCCAGATCCTGTCGCAGCTGTCCAATGAAAGTATCTGT TTCGTGGCGTGCATGATTATCATGATGGTCATCGGCATGGTCTGTGGAAGCATTCGGTCCTTGCAGCGTCTCGGA TGGCTGACCAACGCTGCCGTCTGGTTGAACATTGCGGACTTCATCATGATGTGAGTCGTCCGATTTGTACTCCCA AGGCGGGCATGTGCTAACGGCTAAATAGCATGGTCGCTGCTGGTGGCCACTTTGGTATCGACTATCAGGCCGTCA TCTCATCCACCTTGATCCAGGTCGTCGAGCCCGTCAAGGTCTTCGCTGGGCCACCGCCCGACAAGTATCAGATTC AGGCGACAGGGTTCTCGGGACAATTCACTGGTGTCGACCAGATGGTTTGTGAGTGACCTTCGTTACACCCCCATA TTTCCCAGTATATCGACTGACCCTGTCATAGACAGCTACGGTGGTGCTATTTTATTTGTTGCCTTCCTGGCTGAA ATGCGCCATCCGTGGGACTTCTGGAAGGGATTGTTGTGCGCCCAGATGTTCATTTGTTTTGTCTACATCTTCTTC GGTGCCTTTGTAAGATCCTATATATGGAGTCTGTTGACAATACGTATCTGACTAACAGTATTACAGGTCTACAGC TTCTACGGCCAATACTCCATCTCCAACCTTTACAACGTGGTTGAGCCGAAAGGTCTACAAATGGCAGTAAATATA GTCTACTTTTTAACATCCATTATTGCCTGCAGTAAGTTCTAGTCTCCTTTCTCGTTGACTTTCATGTGCCTCGCT AACCAGGTCAGTTCTCTACTTCAATATCGGCATGAAGTCCATCTACCAACAGGTCTTTATGGAGCTTCTCAACTT CCCAGATATCTCCACCACCCGCGGCCGCATGCTCTGGTACGGTCTCGGCCCGATCTACTGGGTGATTGCGTTCGT CATCGCCGCTGCCGTGCCAAACTTTAGTGGAATTTCCAGCATGGTCGGCGCGGCCCTGATCCTCAACTTCACCTA CACGCTCCCGGGTATTCTATACGTTGGTTTCCGATGCCAGAAGGATGCTGCGCTACCCGGAGAGGGGTATGATCC TGCGACCGGGGAGACGGTGCGCCATGATTCCGGCATGCAGCGGTATATCCGTGGGTTCAAGAAGCACTGGGTGCT GAATCTTTTCTGTATCTTCTACTTCTGTGGTGGATTGGCGTGTTCTGGTATGGGCATGTGGGCTGCCATTGAGAG TTTGATTGAGGTGTTTGGGCCCGGGGGTACGGTGGCTACGTCTTTTGGGTGTGCTGCACCTGTTTAG |