© 2022 - Robin Ohm - Utrecht University - The Netherlands
Built with Python Django and Wagtail
| Protein ID | Ani_SJS72_1|g5892.t1 |
| Gene name | |
| Location | scaffold_042:70276..72212 |
| Strand | + |
| Gene length (bp) | 1936 |
| Transcript length (bp) | 1605 |
| Coding sequence length (bp) | 1605 |
| Protein length (aa) | 535 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF07690 | MFS_1 | Major Facilitator Superfamily | 6.2E-18 | 83 | 400 |
| PF00083 | Sugar_tr | Sugar (and other) transporter | 2.6E-16 | 101 | 523 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0055085 | transmembrane transport | Yes |
| GO:0016021 | integral component of membrane | Yes |
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0009987 | cellular process | No |
| GO:0110165 | cellular anatomical entity | No |
| GO:0005215 | transporter activity | No |
| GO:0005575 | cellular_component | No |
| GO:0031224 | intrinsic component of membrane | No |
| GO:0003674 | molecular_function | No |
| GO:0006810 | transport | No |
| GO:0008150 | biological_process | No |
| GO:0051234 | establishment of localization | No |
| GO:0051179 | localization | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 70 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 67 | 89 | 22 |
| 2 | 104 | 126 | 22 |
| 3 | 139 | 161 | 22 |
| 4 | 193 | 215 | 22 |
| 5 | 236 | 258 | 22 |
| 6 | 350 | 372 | 22 |
| 7 | 393 | 415 | 22 |
| 8 | 419 | 438 | 19 |
| 9 | 445 | 467 | 22 |
| 10 | 504 | 526 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS72_1|g5892.t1 MDNIQQEKKRDSAQQHANSIVGEEKGVILDDPDVQQFYGSSTTEAYRLKSELVGKCMEEIGMGRFQWKLFVVTGF GWIVDNFASQGISSVQPPIKLEFPGIVQVSYSSVAYYTGLILGASFWGISSDLIGRKPAFNSTLLIAGIFLCGAA GTMNFLAFSAMWAVIGTAAGGNVPVDSMIFLEFVPGSHQYLLTALSAWWNLGQLIVSLLAWVFLANYSCPTDSTP ATCHRSDNMGWRYTLITLGALSLAFTIIRVFIFKLPETPRYLLSKGKDQAAVESVNYVARQNGKPEPLTIGKFQE IDARLGIANESNTSAQGPGLSTKEIIKENMKDFRSTHYQALFATRKLGIHTGIIWLIWLTIGIAYPLYFNFLPSY LDTKFSSSDSLYTTYRNYCIESAVGVVGPLSAAYLVTTFFGRRWMMGISSIITGVFLFAYVGVSNPTSSLAFACV TGMLGNFEYAIMYAFTPESFPAPHRGTGTGTAASLLRFGGLCASLIASQTGFTPAPIYASAALWVVVGVVCFGLP FETHGHAAI* |
| Coding | >Ani_SJS72_1|g5892.t1 ATGGACAATATACAGCAGGAGAAGAAGCGTGATTCGGCTCAACAACATGCTAACAGTATTGTGGGCGAAGAGAAG GGGGTCATACTGGATGACCCTGATGTGCAGCAGTTCTATGGCTCCTCGACGACGGAAGCATATCGGTTGAAGTCG GAGTTGGTGGGTAAGTGTATGGAGGAAATTGGGATGGGAAGATTTCAGTGGAAGCTCTTCGTCGTGACGGGGTTC GGATGGATTGTGGATAACTTCGCATCACAAGGCATAAGCAGCGTCCAGCCTCCTATCAAGCTCGAGTTCCCTGGC ATCGTCCAGGTGAGCTACAGCTCCGTGGCCTACTATACAGGCTTGATCCTTGGGGCTTCGTTCTGGGGTATCTCT AGCGACTTGATCGGCCGGAAGCCCGCGTTCAACTCGACCCTCCTGATTGCAGGTATATTCTTATGTGGTGCTGCT GGTACTATGAACTTTCTAGCGTTCAGCGCTATGTGGGCTGTCATCGGGACCGCAGCGGGAGGGAATGTCCCAGTG GATTCGATGATCTTTCTGGAGTTTGTTCCTGGGAGTCACCAATACCTGCTGACAGCTCTCTCGGCCTGGTGGAAC TTAGGCCAATTAATCGTGTCGCTCCTGGCCTGGGTCTTCCTGGCCAACTACAGCTGTCCAACCGATTCTACACCA GCAACATGCCATCGCAGCGACAATATGGGATGGAGATACACCCTTATCACTCTAGGCGCCCTTTCCCTTGCCTTC ACTATCATCCGCGTCTTCATCTTCAAGCTCCCCGAAACCCCCCGCTACCTTCTTTCCAAAGGCAAGGACCAAGCC GCCGTCGAGTCTGTCAACTACGTCGCACGCCAGAATGGCAAGCCTGAGCCTCTCACTATAGGCAAGTTCCAGGAG ATCGATGCCCGACTGGGAATTGCCAATGAATCCAACACTTCAGCACAAGGCCCGGGCTTGAGCACCAAGGAGATC ATTAAGGAGAACATGAAAGACTTCCGGTCGACACACTACCAAGCTCTCTTTGCCACGAGGAAACTTGGTATTCAT ACTGGTATCATCTGGCTTATTTGGTTGACAATCGGAATCGCCTACCCTCTCTACTTCAACTTCCTTCCCTCCTAC CTCGACACAAAATTCTCCTCCTCCGACTCCCTCTACACTACCTACCGAAACTACTGCATCGAATCCGCCGTCGGC GTAGTCGGGCCCCTTTCCGCAGCTTACCTGGTAACCACTTTCTTCGGCCGGCGTTGGATGATGGGTATTTCGTCC ATCATCACGGGGGTCTTCCTCTTCGCGTATGTGGGCGTCAGTAATCCAACGTCAAGTCTAGCGTTCGCATGTGTA ACAGGCATGTTGGGGAATTTCGAATACGCAATCATGTATGCCTTTACTCCCGAATCCTTCCCCGCTCCGCATCGT GGAACCGGTACTGGAACTGCTGCTTCGTTGTTGAGGTTTGGTGGGCTCTGTGCTAGTTTGATTGCCTCACAGACT GGGTTCACGCCGGCGCCGATATATGCCAGTGCTGCGCTGTGGGTTGTTGTTGGGGTAGTGTGCTTTGGGTTGCCG TTCGAGACACATGGACACGCGGCTATCTAG |
| Transcript | >Ani_SJS72_1|g5892.t1 ATGGACAATATACAGCAGGAGAAGAAGCGTGATTCGGCTCAACAACATGCTAACAGTATTGTGGGCGAAGAGAAG GGGGTCATACTGGATGACCCTGATGTGCAGCAGTTCTATGGCTCCTCGACGACGGAAGCATATCGGTTGAAGTCG GAGTTGGTGGGTAAGTGTATGGAGGAAATTGGGATGGGAAGATTTCAGTGGAAGCTCTTCGTCGTGACGGGGTTC GGATGGATTGTGGATAACTTCGCATCACAAGGCATAAGCAGCGTCCAGCCTCCTATCAAGCTCGAGTTCCCTGGC ATCGTCCAGGTGAGCTACAGCTCCGTGGCCTACTATACAGGCTTGATCCTTGGGGCTTCGTTCTGGGGTATCTCT AGCGACTTGATCGGCCGGAAGCCCGCGTTCAACTCGACCCTCCTGATTGCAGGTATATTCTTATGTGGTGCTGCT GGTACTATGAACTTTCTAGCGTTCAGCGCTATGTGGGCTGTCATCGGGACCGCAGCGGGAGGGAATGTCCCAGTG GATTCGATGATCTTTCTGGAGTTTGTTCCTGGGAGTCACCAATACCTGCTGACAGCTCTCTCGGCCTGGTGGAAC TTAGGCCAATTAATCGTGTCGCTCCTGGCCTGGGTCTTCCTGGCCAACTACAGCTGTCCAACCGATTCTACACCA GCAACATGCCATCGCAGCGACAATATGGGATGGAGATACACCCTTATCACTCTAGGCGCCCTTTCCCTTGCCTTC ACTATCATCCGCGTCTTCATCTTCAAGCTCCCCGAAACCCCCCGCTACCTTCTTTCCAAAGGCAAGGACCAAGCC GCCGTCGAGTCTGTCAACTACGTCGCACGCCAGAATGGCAAGCCTGAGCCTCTCACTATAGGCAAGTTCCAGGAG ATCGATGCCCGACTGGGAATTGCCAATGAATCCAACACTTCAGCACAAGGCCCGGGCTTGAGCACCAAGGAGATC ATTAAGGAGAACATGAAAGACTTCCGGTCGACACACTACCAAGCTCTCTTTGCCACGAGGAAACTTGGTATTCAT ACTGGTATCATCTGGCTTATTTGGTTGACAATCGGAATCGCCTACCCTCTCTACTTCAACTTCCTTCCCTCCTAC CTCGACACAAAATTCTCCTCCTCCGACTCCCTCTACACTACCTACCGAAACTACTGCATCGAATCCGCCGTCGGC GTAGTCGGGCCCCTTTCCGCAGCTTACCTGGTAACCACTTTCTTCGGCCGGCGTTGGATGATGGGTATTTCGTCC ATCATCACGGGGGTCTTCCTCTTCGCGTATGTGGGCGTCAGTAATCCAACGTCAAGTCTAGCGTTCGCATGTGTA ACAGGCATGTTGGGGAATTTCGAATACGCAATCATGTATGCCTTTACTCCCGAATCCTTCCCCGCTCCGCATCGT GGAACCGGTACTGGAACTGCTGCTTCGTTGTTGAGGTTTGGTGGGCTCTGTGCTAGTTTGATTGCCTCACAGACT GGGTTCACGCCGGCGCCGATATATGCCAGTGCTGCGCTGTGGGTTGTTGTTGGGGTAGTGTGCTTTGGGTTGCCG TTCGAGACACATGGACACGCGGCTATCTAG |
| Gene | >Ani_SJS72_1|g5892.t1 ATGGACAATATACAGCAGGAGAAGAAGCGTGATTCGGCTCAACAACATGCTAACAGTATTGTGGGCGAAGAGAAG GGGGTCATACTGGATGACCCTGATGTGCAGCAGTTCTATGGCTCCTCGACGACGGAAGCATATCGGTTGAAGTCG GAGTTGGTGGGTAAGTGTATGGAGGAAATTGGGATGGGAAGGTATGGACTCCTCTTAACCGTGGTAGTGAGGGTG AAATGGGCATTGATAAGTGCAGATTTCAGTGGAAGCTCTTCGTCGTGACGGGGTTCGGATGGATTGTGGATAACG TTCGTGTCGCTATTCAACTATGAGGACTTGCTTCCACTGACGAGAGATATAGTTCGCATCACAAGGCATAAGCAG CGTCCAGCCTCCTATCAAGCTCGAGTTCCCTGGCATCGTCCAGGTGAGCTACAGCTCCGTGGCCTACTATACAGG CTTGATCCTTGGGGCTTCGTTCTGGGGTATCTCTAGCGACTTGATCGGCCGGAAGCCCGCGTTCAACTCGACCCT CCTGATTGCAGGTATATTCTTATGTGGTGCTGCTGGTACTATGAACTTTCTAGCGTTCAGCGCTATGTGGGCTGT CATCGGGACCGCAGCGGGAGGGAATGTCCCAGTGGATTCGATGATCTTTCTGGAGTTTGTTCCTGGGAGGTAAGG ATTCCCTCAGTCTATTGGAAGGAATGAAGGTTAATCGAAGCAACTAGTCACCAATACCTGCTGACAGCTCTCTCG GCCTGGTGGAACTTAGGCCAATTAATCGTGTCGCTCCTGGCCTGGGTCTTCCTGGCCAACTACAGCTGTCCAACC GATTCTACACCAGCAACATGCCATCGCAGCGACAATATGGGATGGTATGTCTTCCAAATATTGATCTGCTACTTC AAGCATCTAAAGAATGCAGGAGATACACCCTTATCACTCTAGGCGCCCTTTCCCTTGCCTTCACTATCATCCGCG TCTTCATCTTCAAGCTCCCCGAAACCCCCCGCTACCTTCTTTCCAAAGGCAAGGACCAAGCCGCCGTCGAGTCTG TCAACTACGTCGCACGCCAGAATGGCAAGCCTGAGCCTCTCACTATAGGCAAGTTCCAGGAGATCGATGCCCGAC TGGGAATTGCCAATGAATCCAACACTTCAGCACAAGGCCCGGGCTTGAGCACCAAGGAGATCATTAAGGAGAACA TGAAAGACTTCCGGTCGACACACTACCAAGCTCTCTTTGCCACGAGGAAACTTGGTATTCATACTGGTATCATCT GGCTTATTTGGTTGACAATCGGTACGTGTCGCATCCGCCTTCTATAACATTAAAACCATGTAAACTAAATCAAGT ACGCAGGAATCGCCTACCCTCTCTACTTCAACTTCCTTCCCTCCTACCTCGACACAAAATTCTCCTCCTCCGACT CCCTCTACACTACCTACCGAAACTACTGCATCGAATCCGCCGTCGGCGTAGTCGGGCCCCTTTCCGCAGCTTACC TGGTAACCACTTTCTTCGGCCGGCGTTGGATGATGGGTATTTCGTCCATCATCACGGGGGTCTTCCTCTTCGCGT ATGTGGGCGTCAGTAATCCAACGTCAAGTCTAGCGTTCGCATGTGTAACAGGCATGTTGGGGAATTTCGGTACGT GTACCTCAGTCCTACATCTTTATAACTTTCCAGCTTACTGATTATCATCGCAGAATACGCAATCATGTATGCCTT TACTCCCGAATCCTTCCCCGCTCCGCATCGTGGAACCGGTACTGGAACTGCTGCTTCGTTGTTGAGGTTTGGTGG GCTCTGTGCTAGTTTGATTGCCTCACAGACTGGGTTCACGCCGGCGCCGATATATGCCAGTGCTGCGCTGTGGGT TGTTGTTGGGGTAGTGTGCTTTGGGTTGCCGTTCGAGACACATGGACACGCGGCTATCTAG |