© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS72_1|g5880.t1 |
| Gene name | |
| Location | scaffold_042:40263..42102 |
| Strand | + |
| Gene length (bp) | 1839 |
| Transcript length (bp) | 1632 |
| Coding sequence length (bp) | 1632 |
| Protein length (aa) | 544 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00324 | AA_permease | Amino acid permease | 9.5E-115 | 46 | 496 |
| PF13520 | AA_permease_2 | Amino acid permease | 5.5E-34 | 42 | 483 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0055085 | transmembrane transport | Yes |
| GO:0016020 | membrane | Yes |
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0009987 | cellular process | No |
| GO:0110165 | cellular anatomical entity | No |
| GO:0005215 | transporter activity | No |
| GO:0005575 | cellular_component | No |
| GO:0003674 | molecular_function | No |
| GO:0006810 | transport | No |
| GO:0008150 | biological_process | No |
| GO:0051234 | establishment of localization | No |
| GO:0051179 | localization | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 28 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 42 | 64 | 22 |
| 2 | 74 | 92 | 18 |
| 3 | 113 | 135 | 22 |
| 4 | 155 | 177 | 22 |
| 5 | 189 | 208 | 19 |
| 6 | 230 | 252 | 22 |
| 7 | 265 | 287 | 22 |
| 8 | 317 | 339 | 22 |
| 9 | 367 | 384 | 17 |
| 10 | 394 | 416 | 22 |
| 11 | 437 | 459 | 22 |
| 12 | 474 | 491 | 17 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS72_1|g5880.t1 MAAYETSSNRSPQDAEKKGEPMERWASVDVDYGAETDLKRSLSTRHLTMIALGSSIGMGLWLGSGESLENGGPAA IFIGYLLSGTMIWSVSHSIGEMAVMYPLPSAFTQWTEIFIDRSAAFALGWAYWFSYFITIANELQGIVTVLNFWT DKVPIAAWITIFWVVIIFINVFAVRFFGEVEVIASSIKFGWIFVVIISLIVISAGGAPDEGPIGFRYWNSMPFTN GFKGFLSVMPTCIFAMSGSENSALVAAETDNPRKAVPRAVSSIWLRLSLFYVLGSLMITITVSPKDPNLFGGSGV NASPFVIAYRNAGLAPLAHIMNAVIFISVLSTGSISAYGGSRTLMGLTHLNLAPKIFGKADKSGRPVAGLVITLV IGGGLAYLNVNNKGSTVFTWFSNLTSLFTLFGWGTICLSHLRMRYAWKIQGRSVEDLPWRSWTYPYGAIWGLTWC ILLIIAEFYLSLWPLGGNPTAKGFFANYVSVVAIVVLYIGARCYYRGRWWVDASTIDLDGPRRFYADVADVEARP AKTGVKKYASMVVSAILE* |
| Coding | >Ani_SJS72_1|g5880.t1 ATGGCGGCCTACGAAACGTCGAGTAATCGGAGCCCGCAGGATGCTGAGAAGAAAGGCGAGCCCATGGAGCGCTGG GCATCTGTGGATGTTGACTACGGTGCTGAAACCGATCTCAAGCGGAGCTTGTCCACGCGGCATCTGACTATGATT GCGCTGGGGTCATCGATTGGTATGGGATTATGGCTGGGAAGTGGTGAATCGCTGGAGAATGGTGGTCCCGCAGCC ATCTTCATTGGCTACCTGCTGAGTGGCACGATGATATGGTCCGTCAGCCACTCCATCGGTGAGATGGCCGTTATG TATCCTCTGCCATCCGCATTCACTCAGTGGACGGAGATCTTCATCGACAGATCGGCGGCCTTCGCGCTGGGCTGG GCGTATTGGTTCTCCTACTTTATCACGATCGCAAACGAACTTCAGGGTATCGTCACGGTCCTCAATTTTTGGACA GATAAGGTGCCCATTGCGGCCTGGATCACAATCTTCTGGGTAGTGATCATCTTCATTAATGTTTTTGCGGTCCGG TTCTTTGGCGAGGTGGAGGTCATTGCCTCCTCTATCAAGTTTGGATGGATCTTCGTGGTCATTATCTCTCTGATC GTGATTTCCGCCGGCGGCGCGCCCGACGAAGGACCGATCGGCTTCCGTTACTGGAACTCGATGCCATTTACCAAC GGCTTCAAAGGCTTCCTGTCCGTCATGCCCACCTGCATCTTCGCCATGTCCGGTTCGGAGAACTCGGCGCTGGTC GCAGCAGAGACAGATAACCCGCGCAAGGCGGTGCCACGCGCCGTGAGCTCGATCTGGTTGCGTCTATCGCTGTTC TACGTCTTGGGATCGCTGATGATCACCATCACGGTGTCACCGAAGGATCCTAACCTTTTCGGTGGCAGCGGCGTC AACGCATCGCCATTTGTCATTGCCTATCGCAACGCGGGTCTTGCTCCATTGGCACACATCATGAATGCGGTGATC TTCATCTCTGTGTTGTCCACGGGAAGTATTTCTGCCTATGGTGGTTCGCGGACACTGATGGGGTTGACACACTTG AATCTTGCGCCGAAGATCTTCGGCAAGGCCGACAAATCCGGTCGCCCCGTCGCCGGACTGGTCATCACGCTTGTC ATTGGCGGCGGCTTGGCCTACCTCAACGTCAACAACAAGGGTTCGACGGTCTTCACCTGGTTCTCGAACCTGACC TCCCTCTTCACGCTCTTCGGATGGGGCACCATCTGCCTCTCTCACCTCCGTATGCGCTACGCCTGGAAGATCCAA GGGCGCTCCGTCGAAGACCTCCCCTGGCGGTCCTGGACCTACCCCTACGGGGCCATCTGGGGCTTGACCTGGTGC ATTCTGCTGATCATCGCCGAGTTCTATCTCAGTTTGTGGCCACTGGGCGGCAATCCCACGGCCAAGGGCTTCTTC GCGAACTATGTCTCGGTGGTAGCGATCGTGGTGCTGTATATCGGGGCGCGCTGCTACTACCGCGGACGGTGGTGG GTGGATGCGAGCACGATTGACCTCGATGGCCCTCGGCGGTTCTATGCCGATGTGGCGGATGTCGAGGCGAGGCCG GCCAAGACGGGGGTGAAGAAGTATGCGTCGATGGTGGTGTCGGCTATTCTTGAGTAG |
| Transcript | >Ani_SJS72_1|g5880.t1 ATGGCGGCCTACGAAACGTCGAGTAATCGGAGCCCGCAGGATGCTGAGAAGAAAGGCGAGCCCATGGAGCGCTGG GCATCTGTGGATGTTGACTACGGTGCTGAAACCGATCTCAAGCGGAGCTTGTCCACGCGGCATCTGACTATGATT GCGCTGGGGTCATCGATTGGTATGGGATTATGGCTGGGAAGTGGTGAATCGCTGGAGAATGGTGGTCCCGCAGCC ATCTTCATTGGCTACCTGCTGAGTGGCACGATGATATGGTCCGTCAGCCACTCCATCGGTGAGATGGCCGTTATG TATCCTCTGCCATCCGCATTCACTCAGTGGACGGAGATCTTCATCGACAGATCGGCGGCCTTCGCGCTGGGCTGG GCGTATTGGTTCTCCTACTTTATCACGATCGCAAACGAACTTCAGGGTATCGTCACGGTCCTCAATTTTTGGACA GATAAGGTGCCCATTGCGGCCTGGATCACAATCTTCTGGGTAGTGATCATCTTCATTAATGTTTTTGCGGTCCGG TTCTTTGGCGAGGTGGAGGTCATTGCCTCCTCTATCAAGTTTGGATGGATCTTCGTGGTCATTATCTCTCTGATC GTGATTTCCGCCGGCGGCGCGCCCGACGAAGGACCGATCGGCTTCCGTTACTGGAACTCGATGCCATTTACCAAC GGCTTCAAAGGCTTCCTGTCCGTCATGCCCACCTGCATCTTCGCCATGTCCGGTTCGGAGAACTCGGCGCTGGTC GCAGCAGAGACAGATAACCCGCGCAAGGCGGTGCCACGCGCCGTGAGCTCGATCTGGTTGCGTCTATCGCTGTTC TACGTCTTGGGATCGCTGATGATCACCATCACGGTGTCACCGAAGGATCCTAACCTTTTCGGTGGCAGCGGCGTC AACGCATCGCCATTTGTCATTGCCTATCGCAACGCGGGTCTTGCTCCATTGGCACACATCATGAATGCGGTGATC TTCATCTCTGTGTTGTCCACGGGAAGTATTTCTGCCTATGGTGGTTCGCGGACACTGATGGGGTTGACACACTTG AATCTTGCGCCGAAGATCTTCGGCAAGGCCGACAAATCCGGTCGCCCCGTCGCCGGACTGGTCATCACGCTTGTC ATTGGCGGCGGCTTGGCCTACCTCAACGTCAACAACAAGGGTTCGACGGTCTTCACCTGGTTCTCGAACCTGACC TCCCTCTTCACGCTCTTCGGATGGGGCACCATCTGCCTCTCTCACCTCCGTATGCGCTACGCCTGGAAGATCCAA GGGCGCTCCGTCGAAGACCTCCCCTGGCGGTCCTGGACCTACCCCTACGGGGCCATCTGGGGCTTGACCTGGTGC ATTCTGCTGATCATCGCCGAGTTCTATCTCAGTTTGTGGCCACTGGGCGGCAATCCCACGGCCAAGGGCTTCTTC GCGAACTATGTCTCGGTGGTAGCGATCGTGGTGCTGTATATCGGGGCGCGCTGCTACTACCGCGGACGGTGGTGG GTGGATGCGAGCACGATTGACCTCGATGGCCCTCGGCGGTTCTATGCCGATGTGGCGGATGTCGAGGCGAGGCCG GCCAAGACGGGGGTGAAGAAGTATGCGTCGATGGTGGTGTCGGCTATTCTTGAGTAG |
| Gene | >Ani_SJS72_1|g5880.t1 ATGGCGGCCTACGAAACGTCGAGTAATCGGAGCCCGCAGGATGCTGAGAAGAAAGGCGAGCCCATGGAGCGCTGG GCATCTGTGGATGTTGACTACGGTGCTGAAACCGATCTCAAGCGGAGCTTGTCCACGCGGCATCTGACTATGATT GCGCTGGGGTCATCGATTGGTATGGGATTATGGCTGGGAAGTGGTGAATCGCTGGAGAATGGTGGTCCCGCAGCC ATCTTCATTGGCTACCTGCTGAGTGGCACGATGATATGGTCCGTCAGCCACTCCATCGGTGAGATGGCCGTTATG TATCCTCTGCCATCCGCATTCACTCAGTGGACGGAGATCTTCATCGACAGATCGGCGGCCTTCGCGCTGGGCTGG GCGTATTGGTTCTCCTACTTTATCACGATCGCAAACGAACTTCAGGTAGGACCTATGTATCTGGGTAGCTGAGAG TTCTGTGCTGACTGCTTAGGGTATCGTCACGGTCCTCAATTTTTGGACAGATAAGGTGCCCATTGCGGCCTGGAT CACAATCTTCTGGGTAGTGATCATCTTCATTAATGTTTTTGCGGTCCGGTTCTTTGGCGAGGTGGAGGTCATTGC CTCCTCTATCAAGTTTGGATGGATCTTCGTGGTCATTATCTCTCTGATCGGTTAGTCGCGTGCGCATGATCTCCT TTTCATCGAATCCTCCAACTGACGCAAACCCATCTCGTGTTTGATAGTGATTTCCGCCGGCGGCGCGCCCGACGA AGGACCGATCGGCTTCCGTTACTGGAACTCGATGCCATTTACCAACGGCTTCAAAGGCTTCCTGTCCGTCATGCC CACCTGCATCTTCGCCATGTCCGGTTCGGAGAACTCGGCGCTGGTCGCAGCAGAGACAGATAACCCGCGCAAGGC GGTGCCACGCGCCGTGAGCTCGATCTGGTTGCGTCTATCGCTGTTCTACGTCTTGGGATCGCTGATGATCACCAT CACGGTGTCACCGAAGGATCCTAACCTTTTCGGTGGCAGCGGCGTCAACGCATCGCCATTTGTCATTGCCTATCG CAACGCGGGTCTTGCTCCATTGGCACACATCATGAATGCGGTGATCTTCATCTCTGTGTTGTCCACGGGAAGTAT TTCTGCCTATGGTGGTTCGCGGACACTGATGGGGTTGACACACTTGAATCTTGCGCCGAAGGTTGGTCTTCGCTC CCTCTCAATAGTATCCAGTTCATCAATTACCTGTCTAAGTCTTGTCACTAACTCCTCTGCCTACAAACCTAGATC TTCGGCAAGGCCGACAAATCCGGTCGCCCCGTCGCCGGACTGGTCATCACGCTTGTCATTGGCGGCGGCTTGGCC TACCTCAACGTCAACAACAAGGGTTCGACGGTCTTCACCTGGTTCTCGAACCTGACCTCCCTCTTCACGCTCTTC GGATGGGGCACCATCTGCCTCTCTCACCTCCGTATGCGCTACGCCTGGAAGATCCAAGGGCGCTCCGTCGAAGAC CTCCCCTGGCGGTCCTGGACCTACCCCTACGGGGCCATCTGGGGCTTGACCTGGTGCATTCTGCTGATCATCGCC GAGTTCTATCTCAGTTTGTGGCCACTGGGCGGCAATCCCACGGCCAAGGGCTTCTTCGCGAACTATGTCTCGGTG GTAGCGATCGTGGTGCTGTATATCGGGGCGCGCTGCTACTACCGCGGACGGTGGTGGGTGGATGCGAGCACGATT GACCTCGATGGCCCTCGGCGGTTCTATGCCGATGTGGCGGATGTCGAGGCGAGGCCGGCCAAGACGGGGGTGAAG AAGTATGCGTCGATGGTGGTGTCGGCTATTCTTGAGTAG |