© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS72_1|g5870.t1 |
| Gene name | |
| Location | scaffold_042:14728..15799 |
| Strand | + |
| Gene length (bp) | 1071 |
| Transcript length (bp) | 828 |
| Coding sequence length (bp) | 828 |
| Protein length (aa) | 276 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF05724 | TPMT | Thiopurine S-methyltransferase (TPMT) | 1.6E-28 | 60 | 214 |
| PF13489 | Methyltransf_23 | Methyltransferase domain | 9.0E-10 | 69 | 198 |
| PF13847 | Methyltransf_31 | Methyltransferase domain | 2.9E-07 | 76 | 198 |
| PF08241 | Methyltransf_11 | Methyltransferase domain | 2.4E-07 | 75 | 195 |
| PF13649 | Methyltransf_25 | Methyltransferase domain | 9.4E-07 | 77 | 191 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0008168 | methyltransferase activity | Yes |
| GO:0008757 | S-adenosylmethionine-dependent methyltransferase activity | Yes |
| GO:0003824 | catalytic activity | No |
| GO:0016741 | transferase activity, transferring one-carbon groups | No |
| GO:0003674 | molecular_function | No |
| GO:0016740 | transferase activity | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 13 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS72_1|g5870.t1 MSEAPNPPVQGRLISHFADRRAEDQGSGWSALWDSNESDLWDRGSPSIALVDVVEQQQDVFFPYTRDGRRKKALV PGCGRGYDPVMLALHGFDVYGLDISTTGVSEATKYATSEMQSPQGYNFSAGAVTTSDVGSVKFIAGDFFSSKWES QALQDGDKFDLIYDYTFLCALHPDLRRKWAERMSQLLHPGGLLVCLEFPMYKDTSLPGPPWGLNGVHWDLLARGG DGITNITKEEEDEDSGIQLSGQFRRAQYFRPIRSYPSGKGTDMLSIYVRR* |
| Coding | >Ani_SJS72_1|g5870.t1 ATGTCCGAAGCACCTAATCCTCCTGTTCAAGGCCGCCTTATTAGCCATTTTGCCGACCGGAGAGCGGAGGACCAA GGCTCAGGCTGGTCCGCACTCTGGGACTCCAACGAGAGCGATCTTTGGGATAGAGGGAGTCCTTCAATCGCACTA GTCGATGTAGTAGAGCAGCAGCAGGATGTCTTCTTTCCATATACTCGCGATGGACGAAGGAAGAAAGCTCTCGTT CCGGGCTGTGGACGAGGCTATGATCCCGTCATGTTAGCTCTGCATGGCTTTGATGTCTACGGTCTCGATATATCC ACCACTGGTGTTTCAGAGGCAACAAAGTACGCCACCTCTGAAATGCAGAGTCCACAAGGGTATAACTTCTCCGCA GGAGCCGTCACTACTAGCGATGTAGGGAGTGTAAAATTTATTGCGGGTGACTTTTTCAGCTCCAAGTGGGAGAGT CAAGCTCTACAGGATGGTGACAAGTTCGATTTGATCTATGACTATACGTTCCTCTGTGCCCTCCACCCGGACCTC CGTCGAAAATGGGCTGAGCGGATGAGCCAGCTCCTCCATCCCGGAGGCTTGCTCGTCTGTCTTGAGTTTCCCATG TACAAGGACACCTCCTTACCAGGCCCACCGTGGGGACTGAATGGAGTCCACTGGGATCTGCTGGCGCGCGGCGGG GACGGGATCACTAACATTACTAAAGAGGAAGAAGACGAAGATTCTGGTATTCAGCTGTCAGGGCAGTTTCGGCGA GCACAATACTTTAGGCCTATACGGTCGTATCCAAGCGGCAAAGGCACGGATATGCTGAGTATTTATGTGAGAAGG TGA |
| Transcript | >Ani_SJS72_1|g5870.t1 ATGTCCGAAGCACCTAATCCTCCTGTTCAAGGCCGCCTTATTAGCCATTTTGCCGACCGGAGAGCGGAGGACCAA GGCTCAGGCTGGTCCGCACTCTGGGACTCCAACGAGAGCGATCTTTGGGATAGAGGGAGTCCTTCAATCGCACTA GTCGATGTAGTAGAGCAGCAGCAGGATGTCTTCTTTCCATATACTCGCGATGGACGAAGGAAGAAAGCTCTCGTT CCGGGCTGTGGACGAGGCTATGATCCCGTCATGTTAGCTCTGCATGGCTTTGATGTCTACGGTCTCGATATATCC ACCACTGGTGTTTCAGAGGCAACAAAGTACGCCACCTCTGAAATGCAGAGTCCACAAGGGTATAACTTCTCCGCA GGAGCCGTCACTACTAGCGATGTAGGGAGTGTAAAATTTATTGCGGGTGACTTTTTCAGCTCCAAGTGGGAGAGT CAAGCTCTACAGGATGGTGACAAGTTCGATTTGATCTATGACTATACGTTCCTCTGTGCCCTCCACCCGGACCTC CGTCGAAAATGGGCTGAGCGGATGAGCCAGCTCCTCCATCCCGGAGGCTTGCTCGTCTGTCTTGAGTTTCCCATG TACAAGGACACCTCCTTACCAGGCCCACCGTGGGGACTGAATGGAGTCCACTGGGATCTGCTGGCGCGCGGCGGG GACGGGATCACTAACATTACTAAAGAGGAAGAAGACGAAGATTCTGGTATTCAGCTGTCAGGGCAGTTTCGGCGA GCACAATACTTTAGGCCTATACGGTCGTATCCAAGCGGCAAAGGCACGGATATGCTGAGTATTTATGTGAGAAGG TGA |
| Gene | >Ani_SJS72_1|g5870.t1 ATGTCCGAAGCACCTAATCCTCCTGTTCAAGGCCGCCTTATTAGCCATTTTGCCGACCGGTACGCTGGGAATTTT TGCTCGCATTAAAGGCCCGGACCGAACCTAGCTAACTCATACCAGGAGAGCGGAGGACCAAGGCTCAGGCTGGTC CGCACTCTGGGACTCCAACGAGAGCGATCTTTGGGATAGAGGGAGTCCTTCAATCGCACTAGTCGATGTAGTAGA GCAGCAGCAGGATGTCTTCTTTCCATATACTCGCGATGGACGAAGGAAGAAAGCTCTCGTTCCGGTAATTCTCTC CCCTTTCCACCAGCCAGTCAGCAGGCCGGAGGTTCGCGGAATCGCTATGAAGAATCTTGTATAATATACTAACTA GCTATGATACTCTTGCAGGGCTGTGGACGAGGCTATGATCCCGTCATGTTAGCTCTGCATGGCTTTGATGTCTAC GGTCTCGATATATCCACCACTGGTGTTTCAGAGGCAACAAAGTACGCCACCTCTGAAATGCAGAGTCCACAAGGG TATAACTTCTCCGCAGGAGCCGTCACTACTAGCGATGTAGGGAGTGTAAAATTTATTGCGGGTGACTTTTTCAGC TCCAAGTGGGAGAGTCAAGCTCTACAGGATGGTGACAAGTTCGATTTGATCTATGACTATACGGTATATTACCCC CGGACACCCGGCCTATGTGCTACAAAACAACCTCCAAAAACAAGCAACGAAGCTCACAATCAACAGTTCCTCTGT GCCCTCCACCCGGACCTCCGTCGAAAATGGGCTGAGCGGATGAGCCAGCTCCTCCATCCCGGAGGCTTGCTCGTC TGTCTTGAGTTTCCCATGTACAAGGACACCTCCTTACCAGGCCCACCGTGGGGACTGAATGGAGTCCACTGGGAT CTGCTGGCGCGCGGCGGGGACGGGATCACTAACATTACTAAAGAGGAAGAAGACGAAGATTCTGGTATTCAGCTG TCAGGGCAGTTTCGGCGAGCACAATACTTTAGGCCTATACGGTCGTATCCAAGCGGCAAAGGCACGGATATGCTG AGTATTTATGTGAGAAGGTGA |