Fungal Genomics

at Utrecht University

General Properties

Protein IDAni_SJS72_1|g5866.t1
Gene name
Locationscaffold_042:3076..3655
Strand+
Gene length (bp)579
Transcript length (bp)579
Coding sequence length (bp)579
Protein length (aa) 193

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PFAM Domains

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 20 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ani_SJS72_1|g5866.t1
MKFLSPITALTLLASVASTSPTPANLIPRACTTIAPTAIDILDSANPNTPSTGQQFSLARTATTNTKISALTFTG
IPNGATGCMLAIDIPALAQPIATGSSQADIWTTNPWDLTSAPTWNNQPTRREMVSTFQFPTSPTTSPFHTILASN
TCSNTMSFLALLSTWQTTAGSVDFPNSIGGSQPIGFSLVYNC*
Coding >Ani_SJS72_1|g5866.t1
ATGAAATTCCTCAGCCCTATCACTGCCCTCACTCTCCTCGCCTCCGTGGCATCCACCTCTCCCACCCCCGCCAAC
CTCATCCCCCGCGCCTGCACCACCATCGCCCCAACAGCCATCGACATCCTCGACAGCGCCAACCCTAACACCCCA
AGCACCGGACAACAGTTCTCCCTGGCCCGAACAGCCACTACAAACACCAAGATCTCCGCCCTCACCTTCACCGGC
ATCCCCAACGGCGCCACAGGCTGCATGCTCGCGATCGACATCCCCGCACTCGCGCAGCCTATCGCCACGGGCTCC
AGCCAAGCTGACATCTGGACGACCAACCCTTGGGACTTGACTTCCGCCCCTACGTGGAACAATCAGCCTACTAGG
CGCGAGATGGTGTCGACTTTCCAGTTCCCAACTTCGCCAACTACATCTCCGTTTCACACGATCCTTGCGTCGAAT
ACGTGCTCCAACACGATGAGCTTCTTGGCCTTGCTGTCGACGTGGCAGACTACTGCTGGGAGTGTGGATTTCCCG
AACTCTATTGGAGGAAGTCAGCCGATTGGGTTTAGTTTGGTTTATAATTGTTAG
Transcript >Ani_SJS72_1|g5866.t1
ATGAAATTCCTCAGCCCTATCACTGCCCTCACTCTCCTCGCCTCCGTGGCATCCACCTCTCCCACCCCCGCCAAC
CTCATCCCCCGCGCCTGCACCACCATCGCCCCAACAGCCATCGACATCCTCGACAGCGCCAACCCTAACACCCCA
AGCACCGGACAACAGTTCTCCCTGGCCCGAACAGCCACTACAAACACCAAGATCTCCGCCCTCACCTTCACCGGC
ATCCCCAACGGCGCCACAGGCTGCATGCTCGCGATCGACATCCCCGCACTCGCGCAGCCTATCGCCACGGGCTCC
AGCCAAGCTGACATCTGGACGACCAACCCTTGGGACTTGACTTCCGCCCCTACGTGGAACAATCAGCCTACTAGG
CGCGAGATGGTGTCGACTTTCCAGTTCCCAACTTCGCCAACTACATCTCCGTTTCACACGATCCTTGCGTCGAAT
ACGTGCTCCAACACGATGAGCTTCTTGGCCTTGCTGTCGACGTGGCAGACTACTGCTGGGAGTGTGGATTTCCCG
AACTCTATTGGAGGAAGTCAGCCGATTGGGTTTAGTTTGGTTTATAATTGTTAG
Gene >Ani_SJS72_1|g5866.t1
ATGAAATTCCTCAGCCCTATCACTGCCCTCACTCTCCTCGCCTCCGTGGCATCCACCTCTCCCACCCCCGCCAAC
CTCATCCCCCGCGCCTGCACCACCATCGCCCCAACAGCCATCGACATCCTCGACAGCGCCAACCCTAACACCCCA
AGCACCGGACAACAGTTCTCCCTGGCCCGAACAGCCACTACAAACACCAAGATCTCCGCCCTCACCTTCACCGGC
ATCCCCAACGGCGCCACAGGCTGCATGCTCGCGATCGACATCCCCGCACTCGCGCAGCCTATCGCCACGGGCTCC
AGCCAAGCTGACATCTGGACGACCAACCCTTGGGACTTGACTTCCGCCCCTACGTGGAACAATCAGCCTACTAGG
CGCGAGATGGTGTCGACTTTCCAGTTCCCAACTTCGCCAACTACATCTCCGTTTCACACGATCCTTGCGTCGAAT
ACGTGCTCCAACACGATGAGCTTCTTGGCCTTGCTGTCGACGTGGCAGACTACTGCTGGGAGTGTGGATTTCCCG
AACTCTATTGGAGGAAGTCAGCCGATTGGGTTTAGTTTGGTTTATAATTGTTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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