Protein ID | Ani_SJS72_1|g5847.t1 |
Gene name | |
Location | scaffold_041:237969..240216 |
Strand | + |
Gene length (bp) | 2247 |
Transcript length (bp) | 1881 |
Coding sequence length (bp) | 1881 |
Protein length (aa) | 627 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF01490 | Aa_trans | Transmembrane amino acid transporter protein | 2.3E-71 | 221 | 617 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 30 | 0.45 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 249 | 268 | 19 |
2 | 300 | 322 | 22 |
3 | 332 | 351 | 19 |
4 | 358 | 380 | 22 |
5 | 403 | 425 | 22 |
6 | 438 | 460 | 22 |
7 | 480 | 502 | 22 |
8 | 538 | 557 | 19 |
9 | 561 | 583 | 22 |
10 | 596 | 618 | 22 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS72_1|g5847.t1 MPESTIPTAAGAQASSSHRPIAPGRSSVDSAIEPDVYPYGLATSSGSYSRVENSYPRPRSASISARFRQAGGVNS IDNFARSWQRAAYFPEVLPRRSSFVVDSDEEWAGTTNDIFRPQEYSGHEADFTRPLLGADGGNEDNGMTGQLSKR TSNADIFEPSLGGSYGTISSRVSATTRKHAIQLHREQQSHGDTSVGYEREPVLVKQVHHEDGTRECIVVGQSTVP QTIFNSVNVLIGVGLLSLPLALKHAGWLLGLLFLLFAAVATNYTAKILAKCLDVDKSIVTYADLAYISFGHHARL ATSLLFCLELVGACVALVVLFADSLQALIPGLSLLQWKIVCGLMLIPLNFLPLRLLSVTSILGILSCTSIVIITC IDGLTKPTAPGSLLQPARTYLLPDKWATLPLSFGLIMSPWGGHGVFPNIYRDMRHPQKYGKSLWVTYIFTYSLDC TMAIVGWIMFGDDVRDEVTANILRTDEYSQVLSICMIMFIAIIPITKVPLNCRPLVATVEVLCGLGSHPELQTDP KSTKAMVQNLSRAFIRILVVVSIVFMAVLFPSFDRIMALMGSALCFTICIILPVAFHLKIFGNEISPRERVLDWC LLITSSILALIGTAWSILPQDAISAP* |
Coding | >Ani_SJS72_1|g5847.t1 ATGCCTGAATCCACAATTCCTACAGCTGCTGGTGCCCAGGCTTCTAGCTCACATAGGCCAATTGCGCCTGGCAGG TCGAGCGTTGATTCAGCAATTGAGCCTGATGTATATCCTTATGGGCTTGCAACGAGCAGTGGCAGCTATTCAAGA GTAGAAAATAGCTATCCGAGGCCAAGATCAGCCTCCATCTCCGCGCGGTTCAGACAGGCAGGGGGGGTCAATAGC ATTGACAATTTTGCTCGGTCATGGCAGCGAGCTGCGTATTTTCCAGAGGTCTTACCTCGACGGTCCTCGTTTGTG GTAGACTCTGACGAAGAATGGGCTGGAACTACAAACGACATCTTCAGGCCACAAGAATACTCGGGACATGAGGCC GACTTTACACGCCCTTTGTTGGGTGCTGATGGAGGAAATGAAGACAATGGCATGACCGGCCAGCTGAGCAAAAGG ACGTCAAATGCAGACATTTTTGAACCATCGCTTGGGGGTTCGTACGGAACGATTTCTTCCCGCGTTAGTGCAACG ACACGGAAGCATGCGATCCAATTGCACAGAGAGCAACAAAGTCATGGGGATACATCTGTGGGCTATGAAAGGGAA CCGGTTCTTGTAAAACAAGTGCATCATGAAGACGGTACAAGAGAGTGTATTGTTGTCGGCCAATCTACGGTTCCA CAGACGATCTTCAATTCCGTCAACGTTTTGATCGGTGTTGGTCTGTTGAGCTTGCCGCTAGCTCTGAAGCATGCA GGCTGGCTTCTCGGCCTGCTATTTCTACTATTTGCTGCAGTAGCGACGAACTACACGGCAAAGATCCTTGCAAAG TGTCTTGACGTTGATAAGAGTATTGTCACTTACGCTGATCTAGCATACATTAGCTTCGGTCACCACGCACGCTTA GCGACAAGCCTCTTGTTCTGCTTGGAACTAGTCGGGGCTTGCGTCGCACTGGTTGTGCTTTTTGCGGACAGTCTG CAGGCTCTCATCCCAGGCTTGAGCCTTCTTCAGTGGAAAATAGTATGCGGACTTATGCTTATTCCCCTCAACTTT TTACCATTGCGACTTCTCAGCGTGACAAGTATCCTCGGTATACTTTCTTGTACCTCTATCGTCATTATCACTTGT ATTGATGGGCTTACGAAACCAACCGCCCCGGGATCTCTCCTTCAACCAGCCAGGACGTATTTATTGCCTGACAAG TGGGCCACTCTTCCTCTTAGCTTTGGGCTCATAATGTCACCATGGGGTGGCCACGGCGTATTTCCAAATATATAC CGCGATATGCGGCATCCACAGAAGTATGGGAAAAGTCTCTGGGTCACTTATATTTTTACGTATTCTCTTGACTGC ACGATGGCCATAGTGGGCTGGATCATGTTTGGAGACGATGTTCGAGATGAAGTCACTGCCAACATCCTACGTACA GACGAATATTCGCAGGTATTGTCTATTTGCATGATCATGTTTATCGCCATCATTCCAATCACTAAAGTACCATTG AATTGCCGACCGCTCGTGGCCACAGTCGAAGTCCTCTGTGGACTTGGGTCACACCCTGAACTTCAGACAGATCCC AAAAGCACAAAAGCCATGGTTCAGAACCTTTCAAGAGCTTTTATACGCATCCTTGTCGTGGTCAGCATTGTTTTC ATGGCAGTGCTCTTCCCTTCTTTTGATCGAATTATGGCGCTGATGGGGTCAGCTTTATGTTTCACGATCTGCATC ATATTGCCGGTTGCCTTCCACCTGAAGATATTTGGCAACGAGATAAGTCCAAGAGAACGGGTACTGGACTGGTGC CTTCTAATAACTTCCTCGATATTGGCCTTGATTGGGACTGCATGGTCCATTCTCCCGCAGGATGCTATCTCTGCA CCATGA |
Transcript | >Ani_SJS72_1|g5847.t1 ATGCCTGAATCCACAATTCCTACAGCTGCTGGTGCCCAGGCTTCTAGCTCACATAGGCCAATTGCGCCTGGCAGG TCGAGCGTTGATTCAGCAATTGAGCCTGATGTATATCCTTATGGGCTTGCAACGAGCAGTGGCAGCTATTCAAGA GTAGAAAATAGCTATCCGAGGCCAAGATCAGCCTCCATCTCCGCGCGGTTCAGACAGGCAGGGGGGGTCAATAGC ATTGACAATTTTGCTCGGTCATGGCAGCGAGCTGCGTATTTTCCAGAGGTCTTACCTCGACGGTCCTCGTTTGTG GTAGACTCTGACGAAGAATGGGCTGGAACTACAAACGACATCTTCAGGCCACAAGAATACTCGGGACATGAGGCC GACTTTACACGCCCTTTGTTGGGTGCTGATGGAGGAAATGAAGACAATGGCATGACCGGCCAGCTGAGCAAAAGG ACGTCAAATGCAGACATTTTTGAACCATCGCTTGGGGGTTCGTACGGAACGATTTCTTCCCGCGTTAGTGCAACG ACACGGAAGCATGCGATCCAATTGCACAGAGAGCAACAAAGTCATGGGGATACATCTGTGGGCTATGAAAGGGAA CCGGTTCTTGTAAAACAAGTGCATCATGAAGACGGTACAAGAGAGTGTATTGTTGTCGGCCAATCTACGGTTCCA CAGACGATCTTCAATTCCGTCAACGTTTTGATCGGTGTTGGTCTGTTGAGCTTGCCGCTAGCTCTGAAGCATGCA GGCTGGCTTCTCGGCCTGCTATTTCTACTATTTGCTGCAGTAGCGACGAACTACACGGCAAAGATCCTTGCAAAG TGTCTTGACGTTGATAAGAGTATTGTCACTTACGCTGATCTAGCATACATTAGCTTCGGTCACCACGCACGCTTA GCGACAAGCCTCTTGTTCTGCTTGGAACTAGTCGGGGCTTGCGTCGCACTGGTTGTGCTTTTTGCGGACAGTCTG CAGGCTCTCATCCCAGGCTTGAGCCTTCTTCAGTGGAAAATAGTATGCGGACTTATGCTTATTCCCCTCAACTTT TTACCATTGCGACTTCTCAGCGTGACAAGTATCCTCGGTATACTTTCTTGTACCTCTATCGTCATTATCACTTGT ATTGATGGGCTTACGAAACCAACCGCCCCGGGATCTCTCCTTCAACCAGCCAGGACGTATTTATTGCCTGACAAG TGGGCCACTCTTCCTCTTAGCTTTGGGCTCATAATGTCACCATGGGGTGGCCACGGCGTATTTCCAAATATATAC CGCGATATGCGGCATCCACAGAAGTATGGGAAAAGTCTCTGGGTCACTTATATTTTTACGTATTCTCTTGACTGC ACGATGGCCATAGTGGGCTGGATCATGTTTGGAGACGATGTTCGAGATGAAGTCACTGCCAACATCCTACGTACA GACGAATATTCGCAGGTATTGTCTATTTGCATGATCATGTTTATCGCCATCATTCCAATCACTAAAGTACCATTG AATTGCCGACCGCTCGTGGCCACAGTCGAAGTCCTCTGTGGACTTGGGTCACACCCTGAACTTCAGACAGATCCC AAAAGCACAAAAGCCATGGTTCAGAACCTTTCAAGAGCTTTTATACGCATCCTTGTCGTGGTCAGCATTGTTTTC ATGGCAGTGCTCTTCCCTTCTTTTGATCGAATTATGGCGCTGATGGGGTCAGCTTTATGTTTCACGATCTGCATC ATATTGCCGGTTGCCTTCCACCTGAAGATATTTGGCAACGAGATAAGTCCAAGAGAACGGGTACTGGACTGGTGC CTTCTAATAACTTCCTCGATATTGGCCTTGATTGGGACTGCATGGTCCATTCTCCCGCAGGATGCTATCTCTGCA CCATGA |
Gene | >Ani_SJS72_1|g5847.t1 ATGCCTGAATCCACAATTCCTACAGCTGCTGGTGCCCAGGCTTCTAGCTCACATAGGCCAATTGCGCCTGGCAGG TCGAGCGTTGATTCAGCAATTGAGCCTGATGTATATCCTTATGGGCTTGCAACGAGCAGTGGCAGCTATTCAAGA GTAGAAAATAGCTATCCGAGGCCAAGGTAAGTCGCCCACTCACCGTGAAAGCATACCACGCCAGCTCGGTTTAAC TATGTCTTGCGCTACACAGATCAGCCTCCATCTCCGCGCGGTTCAGACAGGCAGGGGGGGTCAATAGCATTGACA ATTTTGCTCGGTCATGGCAGCGAGCTGCGTATTTTCCAGAGGTCTTACCTCGACGGTCCTCGTTTGTGGTAGACT CTGACGAAGAATGGGCTGGAACTACAAACGACATCTTCAGGCCACAAGAATACTCGGGACATGAGGCCGACTTTA CACGCCCTTTGTTGGGTGCTGATGGAGGAAATGAAGACAATGGCATGACCGGCCAGCTGAGCAAAAGGACGTCAA ATGCAGACATTTTTGAACCATCGCTTGGGGGTTCGTACGGAACGATTTCTTCCCGCGTTAGTGCAACGACACGGA AGCATGCGATCCAATTGCACAGAGAGCAACAAAGTCATGGGGATACATCTGTGGGCTATGAAAGGGAACCGGTTC TTGTAAAACAAGTGCATCATGAAGACGGTACAAGAGAGTGTATTGTTGTCGGCCAATCTACGGTTCCACAGACGA TCTTCAATTCCGTCAACGTTTTGATCGGTGTTGGTCTGTTGAGCTTGCCGCTAGCTCTGAAGCATGCAGGCTGGC TTCTCGGCCTGCTATTTCTACTATTTGCTGCAGTAGCGACGAACTACACGGCAAAGATCCTTGCAAAGTGTCTTG ACGTTGATAAGAGTATTGTCACTTACGCTGATCTAGCATACATTAGCTTCGGTCACCACGCACGCTTAGCGACAA GCCTCTTGTTCTGCTTGGAACTAGTCGGGGCTTGCGTCGCACTGGTTGTGCTTTTTGCGGACAGTCTGCAGGCTC TCATCCCAGGCTTGAGCCTTCTTCAGTGGAAAATAGTATGCGGACTTATGCTTATTCCCCTCAACTTTTTACCAT TGCGACTTCTCAGCGTGACAAGTATCCTCGGTATACTTTCTTGTACCTCTAGTATGTGTGCCTTCTTCCCGAACC CACTGTATTTCCGAGAAGCTAACATTGTCGAAGTCGTCATTATCACTTGTATTGATGGGCTTACGAAACCAACCG CCCCGGGATCTCTCCTTCAACCAGCCAGGACGTATTTATTGCCTGACAAGTGGGCCACTCTTCCTCTTAGCTTTG GGCTCATAATGTGTAAGTCTTATCACTTGCTAGGGGTAGCTTAGGAGAAGGCACTGATGTTCAAGTAGCACCATG GGGTGGCCACGGCGTATTTCCAAATATATACCGCGATATGCGGCATCCACAGAAGTATGGGAAAAGTCTCTGGGT CACTTATATTTTTACGGTAAGCGGGTTTCGGCAACATCTTGAAAGGCAAACGCACAGAGAATCGTGCATAATTTC CCAACAAACAGGAAATAGTGTTCTCAAGTGCTAATTGAAATATTTGTCCTAGTATTCTCTTGACTGCACGATGGC CATAGTGGGCTGGATCATGTTTGGAGACGATGTTCGAGATGAAGTCACTGCCAACATCCTACGTACAGACGAATA TTCGCAGGTATTGTCTATTTGCATGATCATGTTTATCGCCATCATTCCAATCACTAAAGTACCATTGAAGTGAGT ACCATTTCACATGTTGTCATCTTGTGTAATCTGAAAAAAGAACATGAATTATTGATTGACGGATGTAGTTGCCGA CCGCTCGTGGCCACAGTCGAAGTCCTCTGTGGACTTGGGTCACACCCTGAACTTCAGACAGATCCCAAAAGCACA AAAGCCATGGTTCAGAACCTTTCAAGAGCTTTTATACGCATCCTTGTCGTGGTCAGCATTGTTTTCATGGCAGTG CTCTTCCCTTCTTTTGATCGAATTATGGCGCTGATGGGGTCAGCTTTATGTTTCACGATCTGCATCATATTGCCG GTTGCCTTCCACCTGAAGATATTTGGCAACGAGATAAGTCCAAGAGAACGGGTACTGGACTGGTGCCTTCTAATA ACTTCCTCGATATTGGCCTTGATTGGGACTGCATGGTCCATTCTCCCGCAGGATGCTATCTCTGCACCATGA |