© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS72_1|g5843.t1 |
| Gene name | |
| Location | scaffold_041:229730..231077 |
| Strand | - |
| Gene length (bp) | 1347 |
| Transcript length (bp) | 858 |
| Coding sequence length (bp) | 858 |
| Protein length (aa) | 286 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF04511 | DER1 | Der1-like family | 2.8E-28 | 8 | 230 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 14 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 15 | 37 | 22 |
| 2 | 50 | 72 | 22 |
| 3 | 92 | 111 | 19 |
| 4 | 132 | 154 | 22 |
| 5 | 169 | 191 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS72_1|g5843.t1 MDQFWAAPPVTRTLTALTFLQSILVHGGLLSGYYVLFLRRLVFKTLPEIWRLFSPFMITGPGLSLIFDLYFMFTY GSRLETESPRFSAPGDFFTYVSFVASIIMHQLKRFLETREIAPASRIAPQLIFTGAICVLTAGCLLNSVIFTSAL IMAFVYTYSQDNRGRKASFFIVQIPVEFLPWAMLTLTLVVSGWPAALRDGMGIVAAHFYDFLTRIYPTFGGGKNY LVTPEFVRRFFAARKPRSEPRAFGTAYRATDQAQGSSGSWASSFQSPWSRRGPGRRLGGD* |
| Coding | >Ani_SJS72_1|g5843.t1 ATGGACCAGTTTTGGGCTGCTCCTCCTGTTACTAGAACACTCACTGCACTTACCTTTCTACAGTCTATACTGGTA CATGGTGGCCTTCTCAGCGGTTACTATGTACTGTTCCTTCGTCGCCTTGTCTTCAAGACTCTACCAGAGATATGG AGGCTGTTCTCGCCGTTTATGATCACTGGACCAGGCCTTTCCCTGATCTTTGATCTCTACTTTATGTTTACCTAT GGCAGTCGCCTGGAGACTGAATCTCCCCGGTTCAGTGCACCCGGTGATTTTTTCACTTATGTGTCCTTCGTAGCC TCCATCATCATGCATCAGCTGAAGCGGTTCCTGGAAACGAGGGAGATCGCCCCTGCATCCCGTATAGCTCCACAA CTGATTTTTACCGGAGCTATATGCGTTCTCACGGCAGGTTGTCTATTGAATAGTGTAATTTTCACTTCTGCGTTG ATCATGGCTTTCGTTTACACGTATTCCCAAGACAACCGAGGGAGAAAGGCGAGCTTTTTCATCGTCCAAATACCC GTCGAGTTCTTGCCATGGGCAATGCTCACATTAACGCTGGTCGTTTCCGGATGGCCTGCGGCGTTAAGGGACGGC ATGGGCATAGTAGCTGCCCACTTCTACGATTTTCTTACCCGTATTTATCCAACTTTCGGAGGTGGTAAGAATTAC CTCGTCACTCCAGAATTTGTGAGGCGGTTCTTTGCTGCTCGCAAGCCGCGGAGCGAACCTCGCGCCTTTGGGACC GCCTACCGTGCGACGGACCAGGCCCAGGGTTCTTCGGGAAGTTGGGCTTCGTCTTTTCAGAGCCCTTGGAGCAGA AGAGGGCCAGGAAGAAGACTTGGTGGTGACTGA |
| Transcript | >Ani_SJS72_1|g5843.t1 ATGGACCAGTTTTGGGCTGCTCCTCCTGTTACTAGAACACTCACTGCACTTACCTTTCTACAGTCTATACTGGTA CATGGTGGCCTTCTCAGCGGTTACTATGTACTGTTCCTTCGTCGCCTTGTCTTCAAGACTCTACCAGAGATATGG AGGCTGTTCTCGCCGTTTATGATCACTGGACCAGGCCTTTCCCTGATCTTTGATCTCTACTTTATGTTTACCTAT GGCAGTCGCCTGGAGACTGAATCTCCCCGGTTCAGTGCACCCGGTGATTTTTTCACTTATGTGTCCTTCGTAGCC TCCATCATCATGCATCAGCTGAAGCGGTTCCTGGAAACGAGGGAGATCGCCCCTGCATCCCGTATAGCTCCACAA CTGATTTTTACCGGAGCTATATGCGTTCTCACGGCAGGTTGTCTATTGAATAGTGTAATTTTCACTTCTGCGTTG ATCATGGCTTTCGTTTACACGTATTCCCAAGACAACCGAGGGAGAAAGGCGAGCTTTTTCATCGTCCAAATACCC GTCGAGTTCTTGCCATGGGCAATGCTCACATTAACGCTGGTCGTTTCCGGATGGCCTGCGGCGTTAAGGGACGGC ATGGGCATAGTAGCTGCCCACTTCTACGATTTTCTTACCCGTATTTATCCAACTTTCGGAGGTGGTAAGAATTAC CTCGTCACTCCAGAATTTGTGAGGCGGTTCTTTGCTGCTCGCAAGCCGCGGAGCGAACCTCGCGCCTTTGGGACC GCCTACCGTGCGACGGACCAGGCCCAGGGTTCTTCGGGAAGTTGGGCTTCGTCTTTTCAGAGCCCTTGGAGCAGA AGAGGGCCAGGAAGAAGACTTGGTGGTGACTGA |
| Gene | >Ani_SJS72_1|g5843.t1 ATGGACCAGTTTTGGGCTGCTCCTCCTGTTACTAGGTACGCCACATCACTCGTGTTTGATATCAGGACCCATAAC TGACTCTCTTTTAGAACACTCACTGCACTTACCTTTCTACAGTCTATACTGGTACATGGTGGCCTTCTCAGCGGT TACTATGTACTGTTCCTTCGTCGCCTTGTCTTCAAGACTCTACCAGAGATATGGAGGCTGTTCTCGCCGTTTATG ATCACTGGACCAGGCCTTTCCCTGATCTTTGATCTCTACTTTAGTATGGCTTTTGCGCTGTTCCGATGAACGGGC GTGCTAACTGCCGGTAGTGTTTACCTATGGCAGTCGCCTGGAGACTGAATCTCCCCGGTTCAGTGCACCCGGTGA TTTTTTCACTTATGTGTCCTTCGTAGCCTCCATCATCATGGTAAGTTGTGGGAACATCCCAGTCTCATCTGCAAG CGATGACTTCGACCCTCGTTGTCTCCCAATCTTGCTCTGCGCCTATCTTTGTTATTGTTGTCATTTCTTTTTTTC ATCTGTTTACTTGCCACCTCGTATATCTGCCCGCCCAGCGCAGCATCAGCTGAAGCGGTTCCTGGAAACGAGGGA GATCGCCCCTGCATCCCGTATAGCTCCACAACTGATTTTTACCGGAGCTATATGCGTTGTGGGTATGGTGGGACG ACCAGTGAGATAGCTAGTGTGATGAACCTGTTCACACTGGTGGTTATGGTGCCCTACATCTCTATAACTATATAT CCTATTGATTTGTCACTATTTTCATAGACCCTTCCTGCTTTCCAATGTAGCCTCCTTGAATTGCCAGTACTGACA GCCCAAAGCTCACGGCAGGTTGTCTATTGAATAGTGTAATTTTCACTTCTGGTGAGCTTGCCGTGGTACCAAAAT TATGCTTGCCTATACTGATATTTTCTCGACTCAGCGTTGATCATGGCTTTCGTTTACACGTATTCCCAAGACAAC CGAGGGAGAAAGGCGAGCTTTTTCATCGTCCAAATACCCGTCGAGTTCTTGCCATGGGCAATGCTCACATTAACG CTGGTCGTTTCCGGATGGCCTGCGGCGTTAAGGGACGGCATGGGCATAGTAGCTGCCCACTTCTACGATTTTCTT ACCCGTATTTATCCAACTTTCGGAGGTGGTAAGAATTACCTCGTCACTCCAGAATTTGTGAGGCGGTTCTTTGCT GCTCGCAAGCCGCGGAGCGAACCTCGCGCCTTTGGGACCGCCTACCGTGCGACGGACCAGGCCCAGGGTTCTTCG GGAAGTTGGGCTTCGTCTTTTCAGAGCCCTTGGAGCAGAAGAGGGCCAGGAAGAAGACTTGGTGGTGACTGA |