Protein ID | Ani_SJS72_1|g5839.t1 |
Gene name | |
Location | scaffold_041:221345..222704 |
Strand | + |
Gene length (bp) | 1359 |
Transcript length (bp) | 1146 |
Coding sequence length (bp) | 1146 |
Protein length (aa) | 382 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF00892 | EamA | EamA-like transporter family | 1.7E-06 | 202 | 341 |
GO Term | Description | Terminal node |
---|---|---|
GO:0016020 | membrane | Yes |
GO:0016021 | integral component of membrane | Yes |
GO:0110165 | cellular anatomical entity | No |
GO:0005575 | cellular_component | No |
GO:0031224 | intrinsic component of membrane | No |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 51 | 0.45 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 44 | 66 | 22 |
2 | 73 | 92 | 19 |
3 | 112 | 134 | 22 |
4 | 155 | 177 | 22 |
5 | 197 | 219 | 22 |
6 | 236 | 254 | 18 |
7 | 274 | 296 | 22 |
8 | 303 | 322 | 19 |
9 | 326 | 348 | 22 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS72_1|g5839.t1 MAEGKKTDDYTIQMDSIDQGNKSFEAPPPPQPRSPPSGSLSNNPILPVLAYCGSSILMTVMNKYVLSGTDFNLNF FLLCIQSLVCIIAIQTCKSCGLITYRDFSADEARKWFPITLLLIGMIYTGSKALQFLSIPVYTIFKNLTIILIAY GEVLWFGGSVTGLTLFSFGLMVLSSIIAAWADIKHAVESNGDATAKVSTLNAGYIWMLVNCLCTSSYVLGMRKRI KLTNFKDFDTMFYNNLLSIPVLIVLSAFLEDWSSTNVNRNFPPMDRNSIVFAMILSGLSSVFISYTSAWCVRVTS STTYSMVGALNKLPIAISGLIFFDAPVTFPSVSAIVVGFVSGIVYAVAKIKQNAKPRTGVLPTANPPVSASSQSM RDSLRS* |
Coding | >Ani_SJS72_1|g5839.t1 ATGGCTGAAGGCAAGAAGACCGACGACTACACGATCCAGATGGATTCGATAGACCAGGGCAACAAGAGCTTCGAG GCGCCGCCGCCGCCTCAGCCCAGGAGTCCGCCGTCGGGCTCGCTGTCCAACAACCCCATCTTGCCCGTCCTGGCC TATTGTGGATCCTCGATTTTGATGACCGTCATGAACAAATATGTCTTGTCCGGCACTGACTTCAACCTCAACTTT TTCCTCCTCTGCATCCAGTCTCTCGTTTGTATCATCGCTATCCAGACCTGTAAATCATGTGGTTTGATCACTTAT CGCGACTTCAGCGCGGACGAGGCCAGAAAGTGGTTCCCCATCACTCTGCTCTTGATCGGCATGATCTACACGGGC TCTAAGGCGCTTCAGTTCCTCTCGATTCCCGTCTACACCATCTTCAAGAACTTGACCATCATCCTTATCGCTTAC GGAGAGGTGCTGTGGTTTGGTGGCTCCGTCACCGGTCTTACCCTGTTCTCTTTCGGATTGATGGTCCTGAGCTCT ATCATTGCCGCCTGGGCTGACATCAAGCACGCTGTCGAGAGCAATGGCGATGCGACCGCCAAGGTGTCTACTTTG AATGCAGGCTATATCTGGATGCTGGTCAACTGCCTCTGCACGTCGTCCTATGTTTTGGGCATGCGCAAGCGGATC AAGCTGACCAACTTCAAGGACTTTGACACCATGTTCTACAACAACCTTCTGTCGATTCCCGTCCTGATCGTTCTG TCCGCTTTCTTGGAAGACTGGTCATCCACCAACGTCAACCGCAACTTCCCTCCCATGGACCGCAACAGCATCGTT TTCGCCATGATCCTCTCCGGCTTGTCGTCTGTGTTTATTTCCTATACCTCCGCCTGGTGCGTTCGCGTCACTTCT TCGACCACTTACTCCATGGTTGGAGCTCTGAACAAGCTTCCCATTGCTATCTCTGGACTTATTTTCTTCGATGCC CCTGTTACCTTCCCCAGCGTTTCGGCTATCGTCGTTGGCTTTGTTAGCGGTATCGTCTACGCCGTTGCTAAGATC AAGCAAAACGCTAAGCCAAGGACTGGTGTCTTGCCGACCGCCAACCCCCCGGTCAGCGCCAGCAGCCAGAGTATG CGGGACTCGCTGCGTTCCTAA |
Transcript | >Ani_SJS72_1|g5839.t1 ATGGCTGAAGGCAAGAAGACCGACGACTACACGATCCAGATGGATTCGATAGACCAGGGCAACAAGAGCTTCGAG GCGCCGCCGCCGCCTCAGCCCAGGAGTCCGCCGTCGGGCTCGCTGTCCAACAACCCCATCTTGCCCGTCCTGGCC TATTGTGGATCCTCGATTTTGATGACCGTCATGAACAAATATGTCTTGTCCGGCACTGACTTCAACCTCAACTTT TTCCTCCTCTGCATCCAGTCTCTCGTTTGTATCATCGCTATCCAGACCTGTAAATCATGTGGTTTGATCACTTAT CGCGACTTCAGCGCGGACGAGGCCAGAAAGTGGTTCCCCATCACTCTGCTCTTGATCGGCATGATCTACACGGGC TCTAAGGCGCTTCAGTTCCTCTCGATTCCCGTCTACACCATCTTCAAGAACTTGACCATCATCCTTATCGCTTAC GGAGAGGTGCTGTGGTTTGGTGGCTCCGTCACCGGTCTTACCCTGTTCTCTTTCGGATTGATGGTCCTGAGCTCT ATCATTGCCGCCTGGGCTGACATCAAGCACGCTGTCGAGAGCAATGGCGATGCGACCGCCAAGGTGTCTACTTTG AATGCAGGCTATATCTGGATGCTGGTCAACTGCCTCTGCACGTCGTCCTATGTTTTGGGCATGCGCAAGCGGATC AAGCTGACCAACTTCAAGGACTTTGACACCATGTTCTACAACAACCTTCTGTCGATTCCCGTCCTGATCGTTCTG TCCGCTTTCTTGGAAGACTGGTCATCCACCAACGTCAACCGCAACTTCCCTCCCATGGACCGCAACAGCATCGTT TTCGCCATGATCCTCTCCGGCTTGTCGTCTGTGTTTATTTCCTATACCTCCGCCTGGTGCGTTCGCGTCACTTCT TCGACCACTTACTCCATGGTTGGAGCTCTGAACAAGCTTCCCATTGCTATCTCTGGACTTATTTTCTTCGATGCC CCTGTTACCTTCCCCAGCGTTTCGGCTATCGTCGTTGGCTTTGTTAGCGGTATCGTCTACGCCGTTGCTAAGATC AAGCAAAACGCTAAGCCAAGGACTGGTGTCTTGCCGACCGCCAACCCCCCGGTCAGCGCCAGCAGCCAGAGTATG CGGGACTCGCTGCGTTCCTAA |
Gene | >Ani_SJS72_1|g5839.t1 ATGGCTGAAGGCAAGAAGACCGACGACTACACGATCCAGATGGATTCGATAGACCAGGGCAACAAGAGCTTCGAG GCGCCGCCGCCGCCTCAGCCCAGGAGTCCGCCGTCGGGCTCGCTGTCCAACAACCCCATCTTGCCCGTCCTGGCC TATTGTGGATCCTCGATTTTGATGACCGTCATGAACAAATATGTCTTGTCCGGCACTGACTTCAACCTCAACTTT TTCCTCCTCTGCATCCAGGTATGTTGGCTAAAATCGGAGCACATGATGGGCGTGTGTTGGATGTTCAAAGGCTGA CCGCTGTTCGATTTTGCCTGCAGTCTCTCGTTTGTATCATCGCTATCCAGACCTGTAAATCATGTGGTTTGATCA CTTATCGCGACTTCAGCGCGGACGAGGCCAGAAAGTGTAAGTGCTCTGCCTGCTCGTTAGATCCCCTCGCGCCCT CGAACTGACGTGCCTTTGATTATCACTAGGGTTCCCCATCACTCTGCTCTTGATCGGCATGATCTACACGGGCTC TAAGGCGCTTCAGTTCCTCTCGATTCCCGTCTACACCATCTTCAAGAACTTGACCATCATCCTTATCGCTTACGG AGAGGTGCTGTGGTTTGGTGGCTCCGTCACCGGTCTTACCCTGTTCTCTTTCGGATTGATGGTCCTGAGCTCTAT CATTGCCGCCTGGGCTGACATCAAGCACGCTGTCGAGAGCAATGGCGATGCGACCGCCAAGGTGTCTACTTTGAA TGCAGGCTATATCTGGATGCTGGTCAACTGCCTCTGCACGTCGTCCTATGTTTTGGGCATGCGCAAGCGGATCAA GCTGACCAACTTCAAGGACTTTGACAGTACGTTACTCAGACTAAAAACATTGTGGCTCAAAAGCATCCTTTACTG ACCTGCTGTTCTCTAGCCATGTTCTACAACAACCTTCTGTCGATTCCCGTCCTGATCGTTCTGTCCGCTTTCTTG GAAGACTGGTCATCCACCAACGTCAACCGCAACTTCCCTCCCATGGACCGCAACAGCATCGTTTTCGCCATGATC CTCTCCGGCTTGTCGTCTGTGTTTATTTCCTATACCTCCGCCTGGTGCGTTCGCGTCACTTCTTCGACCACTTAC TCCATGGTTGGAGCTCTGAACAAGCTTCCCATTGCTATCTCTGGACTTATTTTCTTCGATGCCCCTGTTACCTTC CCCAGCGTTTCGGCTATCGTCGTTGGCTTTGTTAGCGGTATCGTCTACGCCGTTGCTAAGATCAAGCAAAACGCT AAGCCAAGGACTGGTGTCTTGCCGACCGCCAACCCCCCGGTCAGCGCCAGCAGCCAGAGTATGCGGGACTCGCTG CGTTCCTAA |