© 2022 - Robin Ohm - Utrecht University - The Netherlands
Built with Python Django and Wagtail
| Protein ID | Ani_SJS72_1|g5773.t1 |
| Gene name | |
| Location | scaffold_040:278445..280526 |
| Strand | - |
| Gene length (bp) | 2081 |
| Transcript length (bp) | 1560 |
| Coding sequence length (bp) | 1560 |
| Protein length (aa) | 520 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF07690 | MFS_1 | Major Facilitator Superfamily | 4.5E-30 | 53 | 432 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0055085 | transmembrane transport | Yes |
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0009987 | cellular process | No |
| GO:0005215 | transporter activity | No |
| GO:0003674 | molecular_function | No |
| GO:0006810 | transport | No |
| GO:0008150 | biological_process | No |
| GO:0051234 | establishment of localization | No |
| GO:0051179 | localization | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 35 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 38 | 57 | 19 |
| 2 | 84 | 106 | 22 |
| 3 | 113 | 135 | 22 |
| 4 | 139 | 161 | 22 |
| 5 | 173 | 195 | 22 |
| 6 | 210 | 232 | 22 |
| 7 | 280 | 302 | 22 |
| 8 | 322 | 344 | 22 |
| 9 | 351 | 373 | 22 |
| 10 | 383 | 402 | 19 |
| 11 | 415 | 437 | 22 |
| 12 | 450 | 472 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS72_1|g5773.t1 MTRDTEANSWQEQDIVKPLKSWKGYIWDTWELPSDQRWLLFKLDAFVLTFASIGYFLKNLDLQNVTNAYLSGMEE DLGMFGNQLVTSTSIFTVGYVVGQIPANLLLTRISPRWVIPSLEVGWGIATMCMSSVRSYKALYALRFLVGLFES GFYPGIHYLLGSWYTPQEIGKRAMIFWLAGHIGNLFSGFLQAAAYTNLNGVDGRAGWRWLFIIDGIITLPLALAG YLFFPNLPQNGKKTWWITNEEHILSVNRMRAIGRAGKEPWSMAKLKRILRSWHTYLLPMIYILWNNGYPQVGMGY WLKSFNADPPPVPGKSYTVADINNLPLVTTGISIFVCFVWGLLSDGPCRGSRWPFIHIGAVITLIMCVLLRQMPL YTNIPGRMAVYWLSNIGVGAGPLILSWINEICSTDTEKRALVVAMANDLAYVVQAVAPNFVWKTTDFPAAKKGYL WSIILQVLLMVVTATVQFLLWLDRKRETQSHETVEPMADSDADSGPGSSDHGSVDAKIPQTQITPTVSM* |
| Coding | >Ani_SJS72_1|g5773.t1 ATGACAAGGGATACTGAGGCCAATTCCTGGCAAGAGCAGGATATAGTCAAGCCTCTCAAATCATGGAAAGGCTAC ATTTGGGACACATGGGAACTACCCAGCGATCAGCGTTGGTTATTGTTTAAGCTCGACGCGTTCGTGCTAACATTT GCATCTATTGGTTATTTTCTCAAAAACCTGGACCTACAAAATGTTACAAATGCCTACCTTAGTGGCATGGAGGAG GATCTGGGGATGTTTGGCAACCAGCTGGTGACAAGCACCTCTATATTCACAGTTGGCTATGTTGTTGGCCAGATC CCCGCGAACTTATTGTTGACTCGCATCTCGCCTCGATGGGTGATTCCGTCGCTCGAGGTTGGTTGGGGAATTGCA ACTATGTGCATGTCAAGTGTACGGTCATACAAAGCTCTCTATGCTCTTCGTTTTCTGGTAGGCCTTTTTGAATCT GGGTTTTACCCCGGCATTCATTATCTTCTAGGATCATGGTATACACCACAAGAGATTGGCAAGCGCGCAATGATA TTCTGGCTTGCTGGCCACATTGGAAATTTATTCAGTGGTTTTCTTCAAGCAGCTGCTTATACGAACTTGAACGGT GTTGATGGCCGCGCCGGTTGGCGATGGCTGTTCATTATCGATGGCATCATCACGCTACCCCTCGCCCTAGCCGGC TATCTCTTCTTCCCCAACCTTCCACAGAATGGTAAGAAGACTTGGTGGATAACTAACGAGGAACACATTCTCTCT GTCAACCGAATGCGGGCTATTGGACGTGCTGGAAAGGAGCCTTGGAGTATGGCTAAGTTGAAAAGAATCTTGAGA AGCTGGCATACATATCTACTCCCCATGATATACATTTTGTGGAACAATGGATACCCACAGGTCGGTATGGGTTAC TGGCTGAAAAGTTTCAACGCAGACCCTCCTCCTGTCCCGGGCAAGTCATACACGGTGGCTGACATTAACAACTTA CCATTGGTAACGACCGGTATCTCTATCTTCGTGTGCTTCGTTTGGGGTTTGCTCTCTGATGGTCCCTGTCGTGGA TCGCGCTGGCCCTTTATCCATATCGGTGCCGTCATCACGCTCATTATGTGTGTGCTACTACGCCAAATGCCTCTC TATACCAACATTCCTGGACGCATGGCCGTATATTGGCTCAGTAATATCGGAGTTGGTGCTGGTCCGCTCATTTTG AGCTGGATTAACGAAATTTGCTCAACTGACACCGAGAAAAGAGCTTTGGTTGTCGCCATGGCTAATGATCTTGCC TACGTTGTTCAGGCAGTGGCACCGAACTTCGTATGGAAAACCACAGATTTCCCTGCTGCCAAGAAAGGCTATCTT TGGTCCATCATATTGCAGGTCTTACTCATGGTTGTTACTGCGACAGTTCAATTCCTGCTTTGGTTGGATAGGAAA AGGGAAACCCAAAGCCACGAGACGGTAGAGCCGATGGCGGATTCAGATGCAGACTCGGGGCCAGGAAGCTCTGAC CATGGCTCGGTGGATGCGAAAATCCCCCAAACCCAAATCACACCGACGGTGTCGATGTAG |
| Transcript | >Ani_SJS72_1|g5773.t1 ATGACAAGGGATACTGAGGCCAATTCCTGGCAAGAGCAGGATATAGTCAAGCCTCTCAAATCATGGAAAGGCTAC ATTTGGGACACATGGGAACTACCCAGCGATCAGCGTTGGTTATTGTTTAAGCTCGACGCGTTCGTGCTAACATTT GCATCTATTGGTTATTTTCTCAAAAACCTGGACCTACAAAATGTTACAAATGCCTACCTTAGTGGCATGGAGGAG GATCTGGGGATGTTTGGCAACCAGCTGGTGACAAGCACCTCTATATTCACAGTTGGCTATGTTGTTGGCCAGATC CCCGCGAACTTATTGTTGACTCGCATCTCGCCTCGATGGGTGATTCCGTCGCTCGAGGTTGGTTGGGGAATTGCA ACTATGTGCATGTCAAGTGTACGGTCATACAAAGCTCTCTATGCTCTTCGTTTTCTGGTAGGCCTTTTTGAATCT GGGTTTTACCCCGGCATTCATTATCTTCTAGGATCATGGTATACACCACAAGAGATTGGCAAGCGCGCAATGATA TTCTGGCTTGCTGGCCACATTGGAAATTTATTCAGTGGTTTTCTTCAAGCAGCTGCTTATACGAACTTGAACGGT GTTGATGGCCGCGCCGGTTGGCGATGGCTGTTCATTATCGATGGCATCATCACGCTACCCCTCGCCCTAGCCGGC TATCTCTTCTTCCCCAACCTTCCACAGAATGGTAAGAAGACTTGGTGGATAACTAACGAGGAACACATTCTCTCT GTCAACCGAATGCGGGCTATTGGACGTGCTGGAAAGGAGCCTTGGAGTATGGCTAAGTTGAAAAGAATCTTGAGA AGCTGGCATACATATCTACTCCCCATGATATACATTTTGTGGAACAATGGATACCCACAGGTCGGTATGGGTTAC TGGCTGAAAAGTTTCAACGCAGACCCTCCTCCTGTCCCGGGCAAGTCATACACGGTGGCTGACATTAACAACTTA CCATTGGTAACGACCGGTATCTCTATCTTCGTGTGCTTCGTTTGGGGTTTGCTCTCTGATGGTCCCTGTCGTGGA TCGCGCTGGCCCTTTATCCATATCGGTGCCGTCATCACGCTCATTATGTGTGTGCTACTACGCCAAATGCCTCTC TATACCAACATTCCTGGACGCATGGCCGTATATTGGCTCAGTAATATCGGAGTTGGTGCTGGTCCGCTCATTTTG AGCTGGATTAACGAAATTTGCTCAACTGACACCGAGAAAAGAGCTTTGGTTGTCGCCATGGCTAATGATCTTGCC TACGTTGTTCAGGCAGTGGCACCGAACTTCGTATGGAAAACCACAGATTTCCCTGCTGCCAAGAAAGGCTATCTT TGGTCCATCATATTGCAGGTCTTACTCATGGTTGTTACTGCGACAGTTCAATTCCTGCTTTGGTTGGATAGGAAA AGGGAAACCCAAAGCCACGAGACGGTAGAGCCGATGGCGGATTCAGATGCAGACTCGGGGCCAGGAAGCTCTGAC CATGGCTCGGTGGATGCGAAAATCCCCCAAACCCAAATCACACCGACGGTGTCGATGTAG |
| Gene | >Ani_SJS72_1|g5773.t1 ATGACAAGGGATACTGAGGCCAATTCCTGGCAAGAGCAGGATATAGTCAAGCCTCTCAAATCATGGAAAGGCTAC ATTTGGGACACATGGGAACTACCCAGCGATCAGCGTTGGTTATTGTTTAAGCTCGACGCGTTCGTGCTAACATTT GCATCTGTGTGCCAATAGCTCACTTTCCCAAAGGGAGTCAATACAATTTGCTGACAGCCACAGATTGGTTATTTT CTCAAAAACCTGGACCTACAAAATGTTACAAATGCCTACCTTAGTGGCATGGAGGAGGATCTGGGGATGTTTGGC AACCAGCTGGTGACAAGCACCTCTATATTCACAGTTGGCTATGTTGTTGGCCAGATCCCCGCGAACTTATTGTTG ACTCGCATCTCGCCTCGATGGGTGATTCCGTCGGTAGGCAGTTCATTTCCTATGCATATCTTGATGTCAGCATTC AGTGGAGACTAATACTTGCGCAGCTCGAGGTTGGTTGGGGAATTGCAACTATGTGCATGTCAAGTGTACGGTCAT ACAAAGCTCTCTATGCTCTTCGTTTTCTGGTAGGCCTTTTTGAGTACGTGGGAAACTCCTCTTCTTATCATTCTA TTCGCCGCAGCCTAATCTTGGAAATAGATCTGGGTTTTACCCCGGCATTCATTATCTTCTAGGATCATGGTATAC ACCACAAGAGATTGGCAAGCGCGCAATGATATTCTGGCTTGCTGGCCACATTGGAAATTTATTCAGTGGTTTTCT TCAAGCAGCTGCTTATACGAACTTGAACGGTGTTGATGGCCGCGCCGGTTGGCGATGGCTGTTCATTATCGATGG CATCATCACGCTACCCCTCGCCCTAGCCGGCTATCTCTTCTTCCCCAACCTTCCACAGAATGGTAAGAAGACTTG GTGGATAACTAACGAGGAACACATTCTCTCTGTCAACCGAATGCGGGCTATTGGACGTGCTGGAAAGGAGCCTTG GAGTATGGCTAAGTTGAAAAGAATCTTGAGAAGCTGGCATACATATCTACTCCGTACGTGGTCCACTATCATCAT CGACTTCGGTCAATTATCTAATCAGCCGATCCAGCCATGATATACATTTTGTGGAACAATGGATACCCACAGGTC GGTATGGGTTACTGGCTGAAAAGTTTCAACGCAGACCCTCCTCCTGTCCCGGGCAAGTCATACACGGTGGCTGAC ATTAACAACTGTGAGTCTATTCAAAACAATATGCCATGTGACTCTAATGAGTTTAGTACCATTGGTAACGACCGG TATCTCTATCTTCGTGTGCTTCGTTTGGGGTTTGCTCTCTGATGGTCCCTGTCGTGGATCGCGCTGGCCCTTTAT CCATATCGGTGCCGTCATCACGGTAGGTACTTCCAACCCTTATACCCAGATAGACTCGGCTGTAACATTTTCAAG CTCATTATGTGTGTGCTACTACGCCAAATGCCTCTCTATACCAACATTCCTGGACGCATGGCCGTATATTGGCTC AGTAATATCGGAGTAGGTTAAAGTTACAACCCGCCAAGAAGTGTATTTTCAACTAATACTTACTCTTAGGTTGGT GCTGGTCCGCTCATTTTGAGCTGGATTAACGAAATTTGCTCAACTGACACCGAGAAAAGAGCTTTGGTTGTCGCC ATGGCTAATGATCTTGCCTACGTTGTTCAGGCAGTGGTGAGCCTCCTTCCACCCGATGATAATATAAACCAAAAG TTCTCATGATTTACTCTGAACAGGCACCGAACTTCGTATGGAAAACCACAGATTTCCCTGCTGCCAAGAAAGGCT ATCTTTGGTCCATCATATTGCAGGTCTTACTCAGTGAGTGTTGTGCATCCCGGTATTGTTTTAAAACAGCAGAAG ATAGCGACTAACTCAACCCTCCAGTGGTTGTTACTGCGACAGTTCAATTCCTGCTTTGGTTGGATAGGAAAAGGG AAACCCAAAGCCACGAGACGGTAGAGCCGATGGCGGATTCAGATGCAGACTCGGGGCCAGGAAGCTCTGACCATG GCTCGGTGGATGCGAAAATCCCCCAAACCCAAATCACACCGACGGTGTCGATGTAG |