Fungal Genomics

at Utrecht University

General Properties

Protein IDAni_SJS72_1|g5764.t1
Gene name
Locationscaffold_040:255264..256349
Strand-
Gene length (bp)1085
Transcript length (bp)240
Coding sequence length (bp)240
Protein length (aa) 80

Your browser does not support drawing a protein figure.

PFAM Domains

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 19 0.5

Transmembrane Domains

Domain # Start End Length
1 20 42 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ani_SJS72_1|g5764.t1
MLPRNLITLDFKMIVTRGISLTNFVVASSALAFQVFVLYPWHKQLDDGFEALKKEHIRVLKSLEHLQQERRKQID
DRVA*
Coding >Ani_SJS72_1|g5764.t1
ATGTTACCCCGGAATTTGATTACCCTCGATTTCAAGATGATCGTGACGCGTGGAATATCATTGACAAATTTTGTC
GTGGCATCGTCGGCACTTGCATTCCAGGTGTTTGTTCTATACCCATGGCACAAACAGCTCGACGACGGATTCGAG
GCCCTCAAGAAAGAGCACATTCGAGTGCTAAAGTCTCTCGAACACCTACAACAGGAAAGGAGGAAGCAGATTGAT
GACCGAGTGGCTTAA
Transcript >Ani_SJS72_1|g5764.t1
ATGTTACCCCGGAATTTGATTACCCTCGATTTCAAGATGATCGTGACGCGTGGAATATCATTGACAAATTTTGTC
GTGGCATCGTCGGCACTTGCATTCCAGGTGTTTGTTCTATACCCATGGCACAAACAGCTCGACGACGGATTCGAG
GCCCTCAAGAAAGAGCACATTCGAGTGCTAAAGTCTCTCGAACACCTACAACAGGAAAGGAGGAAGCAGATTGAT
GACCGAGTGGCTTAA
Gene >Ani_SJS72_1|g5764.t1
ATGTTACCCCGGAATTTGATTAGTCAGTGGAACTCTCATTAACCAAGTTAGTTAACTTACACTAACTACTAACTA
GCAACTCCCCTGTGGATTACGGCAATTGTAACCACGGTTATATCAGGCTGACACGATAGAATCCTTAAGGTTACT
TTGTTCTTTGATGGGTAGCACCTTTTGCATATTACCATAAGGCGGGAATAGTTATGGCGCATCGCCTAGTGCGGT
CTGTCGGCCTACAACAAGTGACAGCCACTTGGAAACCTCAGGCTTGGGGACACATATCGATTAAGGTGTCAATTA
CACACGTAGTCGAGCAGTAGATGACAAAGGCAAACGCGCATCTACTGGAGGGAAGTCATTGCAATGCCTTGGACT
TTAGTTAACGGAGAACAACCGCATCATATATGCCAGTCAGCGGCCAGCAAAAGAATGGAATTACACGTCTTGGTA
ACTGTCTGTCAAGCTCTATGCTAGACAAGGAAAGTCTAGTACAATTTTGGGGTAACTTGTGTCGCAATGCTTGCG
AACAACTTTCAGAGATCCGTGGATTCAGCCACTAGTGTGTAGCCCACTAATCGGTACTAGAAATCGGCTAGTTTC
CCGATCCCGCCGAACACACTGAAAGGGGCACCTAAACTTTTCTTGCATTCATCACGCCTTCTATTTCACCTTCGA
CGCTCTCTTCTCTCCGCTCATACATGAAAGTCTTTCCAAAGGGCACTAGTATTCAGGACCTAAACTGTCTTGCCC
CTTTGTTCAAACTTTCCCGTTCCGTTGAGCTGCGGTAAACCTAGAGTCTGGAGATAAACGCCAGCCCTCGATTTG
TAAGTCGATGACATTCGAAGAGAATACCTATACTAACGGTTCGCGAGGACAGCAAGATGATCGTGACGCGTGGAA
TATCATTGACAAATTTTGTCGTGGCATCGTCGGCACTTGCATTCCAGGTGTTTGTTCTATACCCATGGCACAAAC
AGCTCGACGACGGATTCGAGGCCCTCAAGAAAGAGCACATTCGAGTGCTAAAGTCTCTCGAACACCTACAACAGG
AAAGGAGGAAGCAGATTGATGACCGAGTGGCTTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail