Protein ID | Ani_SJS72_1|g5748.t1 |
Gene name | |
Location | scaffold_040:205057..206714 |
Strand | - |
Gene length (bp) | 1657 |
Transcript length (bp) | 1407 |
Coding sequence length (bp) | 1407 |
Protein length (aa) | 469 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF01490 | Aa_trans | Transmembrane amino acid transporter protein | 5.6E-23 | 48 | 445 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 67 | 0.45 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 76 | 98 | 22 |
2 | 126 | 148 | 22 |
3 | 161 | 179 | 18 |
4 | 189 | 211 | 22 |
5 | 242 | 261 | 19 |
6 | 274 | 296 | 22 |
7 | 317 | 339 | 22 |
8 | 354 | 376 | 22 |
9 | 385 | 407 | 22 |
10 | 422 | 444 | 22 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS72_1|g5748.t1 MTAPIYRKEKLEQAPTDVAELASDESTSNEIWNALVTEDHQHEIQLRTMSWQKAAWLLAGDQVCLAIMAQSWSLS VLGWVPGIITMVVSGALFWVTSLTMHKYIMKHPQIRNICDFGYYVFGKSQTAYIFSGFMLLANNILLIGFHILTG AKVLDTLSDHSLCTVTFSAIVMVMGIVLSAPRTLRHVSFMSMFSAACMGLAILLFLIFAGIETAPLDFPTDGPVR TYAFPLPGTSWVDCMNAVLNITFLWVPQILFPTFIAEMEHPEDFPKSLAVLAIISTVLFIVPPAIGFRYLGQYAT APAFGSLGLVKYRKASFGFVIVPTLIIGAIYANVTAKFIYSHLLGTSRHAHSNTVVGWGVWALVMIGIWVLGFIF SEVVPSMGDFLSLLGAAFDSFFGFIFFAVAYWHLYRGKLFAGLGRTSMTLLHAFIMACGMFLLGPGLYAAVEAII TDYSGSVSPAFSCASLGI* |
Coding | >Ani_SJS72_1|g5748.t1 ATGACGGCTCCGATATATCGCAAGGAGAAGCTGGAACAGGCGCCCACTGATGTGGCCGAGCTGGCATCCGACGAG TCCACGTCCAACGAGATCTGGAATGCGCTGGTGACCGAAGACCATCAACATGAGATCCAACTCCGAACCATGTCC TGGCAAAAGGCCGCCTGGTTGCTCGCCGGAGACCAAGTCTGTCTGGCCATCATGGCTCAGTCCTGGTCACTCTCC GTGCTCGGATGGGTGCCCGGCATCATCACCATGGTTGTGTCCGGCGCTCTCTTCTGGGTCACCTCCCTCACCATG CACAAGTACATCATGAAGCACCCGCAAATCAGGAACATTTGCGACTTTGGCTACTATGTCTTCGGCAAAAGCCAG ACGGCGTACATCTTTTCCGGCTTCATGTTGCTGGCTAACAACATCCTGCTGATCGGTTTCCACATCCTGACTGGA GCCAAGGTGCTTGATACACTGTCCGATCACTCCCTGTGTACCGTGACCTTCTCTGCGATCGTCATGGTCATGGGC ATCGTCCTGTCCGCCCCAAGAACCCTGCGTCATGTCTCCTTCATGTCGATGTTCTCAGCGGCTTGTATGGGTCTG GCCATCCTGTTGTTCCTCATTTTCGCGGGAATCGAGACGGCACCCCTGGACTTTCCGACCGATGGTCCTGTGCGA ACATACGCCTTCCCCTTGCCCGGCACCAGCTGGGTGGATTGCATGAACGCCGTGCTGAACATCACCTTCCTCTGG GTGCCCCAGATTCTCTTCCCCACCTTCATCGCGGAGATGGAGCACCCGGAGGACTTCCCCAAGTCGTTGGCGGTC TTGGCCATCATTTCCACCGTTCTCTTCATCGTGCCGCCCGCCATCGGCTTCCGCTACCTGGGCCAATACGCCACT GCACCCGCTTTTGGCAGTCTGGGTCTTGTGAAGTACAGGAAGGCCTCCTTTGGTTTTGTCATCGTGCCTACATTG ATCATCGGCGCCATCTACGCCAACGTCACCGCTAAATTCATCTATTCTCACCTGTTGGGTACCTCCAGACACGCA CACAGCAACACCGTCGTGGGATGGGGAGTGTGGGCCCTGGTGATGATTGGCATCTGGGTACTGGGATTCATCTTT TCCGAGGTCGTCCCCAGCATGGGCGACTTTCTGTCGTTACTGGGTGCCGCCTTTGACTCCTTCTTCGGCTTCATC TTCTTCGCCGTAGCGTACTGGCATTTGTACCGGGGGAAGCTCTTTGCGGGACTCGGGCGCACGAGCATGACCCTG CTGCATGCCTTCATCATGGCTTGTGGCATGTTTCTGTTGGGACCGGGTTTGTATGCGGCAGTCGAGGCCATCATC ACGGATTACTCGGGGTCGGTTTCCCCGGCGTTCAGTTGTGCCAGTCTGGGAATCTGA |
Transcript | >Ani_SJS72_1|g5748.t1 ATGACGGCTCCGATATATCGCAAGGAGAAGCTGGAACAGGCGCCCACTGATGTGGCCGAGCTGGCATCCGACGAG TCCACGTCCAACGAGATCTGGAATGCGCTGGTGACCGAAGACCATCAACATGAGATCCAACTCCGAACCATGTCC TGGCAAAAGGCCGCCTGGTTGCTCGCCGGAGACCAAGTCTGTCTGGCCATCATGGCTCAGTCCTGGTCACTCTCC GTGCTCGGATGGGTGCCCGGCATCATCACCATGGTTGTGTCCGGCGCTCTCTTCTGGGTCACCTCCCTCACCATG CACAAGTACATCATGAAGCACCCGCAAATCAGGAACATTTGCGACTTTGGCTACTATGTCTTCGGCAAAAGCCAG ACGGCGTACATCTTTTCCGGCTTCATGTTGCTGGCTAACAACATCCTGCTGATCGGTTTCCACATCCTGACTGGA GCCAAGGTGCTTGATACACTGTCCGATCACTCCCTGTGTACCGTGACCTTCTCTGCGATCGTCATGGTCATGGGC ATCGTCCTGTCCGCCCCAAGAACCCTGCGTCATGTCTCCTTCATGTCGATGTTCTCAGCGGCTTGTATGGGTCTG GCCATCCTGTTGTTCCTCATTTTCGCGGGAATCGAGACGGCACCCCTGGACTTTCCGACCGATGGTCCTGTGCGA ACATACGCCTTCCCCTTGCCCGGCACCAGCTGGGTGGATTGCATGAACGCCGTGCTGAACATCACCTTCCTCTGG GTGCCCCAGATTCTCTTCCCCACCTTCATCGCGGAGATGGAGCACCCGGAGGACTTCCCCAAGTCGTTGGCGGTC TTGGCCATCATTTCCACCGTTCTCTTCATCGTGCCGCCCGCCATCGGCTTCCGCTACCTGGGCCAATACGCCACT GCACCCGCTTTTGGCAGTCTGGGTCTTGTGAAGTACAGGAAGGCCTCCTTTGGTTTTGTCATCGTGCCTACATTG ATCATCGGCGCCATCTACGCCAACGTCACCGCTAAATTCATCTATTCTCACCTGTTGGGTACCTCCAGACACGCA CACAGCAACACCGTCGTGGGATGGGGAGTGTGGGCCCTGGTGATGATTGGCATCTGGGTACTGGGATTCATCTTT TCCGAGGTCGTCCCCAGCATGGGCGACTTTCTGTCGTTACTGGGTGCCGCCTTTGACTCCTTCTTCGGCTTCATC TTCTTCGCCGTAGCGTACTGGCATTTGTACCGGGGGAAGCTCTTTGCGGGACTCGGGCGCACGAGCATGACCCTG CTGCATGCCTTCATCATGGCTTGTGGCATGTTTCTGTTGGGACCGGGTTTGTATGCGGCAGTCGAGGCCATCATC ACGGATTACTCGGGGTCGGTTTCCCCGGCGTTCAGTTGTGCCAGTCTGGGAATCTGA |
Gene | >Ani_SJS72_1|g5748.t1 ATGACGGCTCCGATATATCGCAAGGAGAAGCTGGAACAGGCGCCCACTGATGTGGCCGAGCTGGCATCCGACGAG TCCACGTCCAACGAGATCTGGAATGCGCTGGTGACCGAAGGTAGGCTGCAGCTCAATTCGTCTGTTTGAACCGAG GCTAAGTCGCGGGGATGCCGGGATATAGACCATCAACATGAGATCCAACTCCGAACCATGTCCTGGCAAAAGGCC GCCTGGTTGCTCGCCGGAGACCAAGTCTGTCTGGCCATCATGGCTCAGTCCTGGTCACTCTCGTAAGTCAAGAGC AAAAATGTCCAATGACCACAAAACTGACCATCATTGTCCCTCAGCGTGCTCGGATGGGTGCCCGGCATCATCACC ATGGTTGTGTCCGGCGCTCTCTTCTGGGTCACCTCCCTCACCATGCACAAGTACATCATGAAGCACCCGCAAATC AGGAACATTTGTAGGAGCTCCTCTCTTCCCATGTCTCCTGTGATAGGATTCTGAGACTGACTCGAGTTCGTCCCC CCGGACAGGCGACTTTGGCTACTATGTCTTCGGCAAAAGCCAGACGGCGTACATCTTTTCCGGCTTCATGTTGCT GGCTAACAACATCCTGCTGATCGGTTTCCACATCCTGACTGGAGCCAAGGTGCTTGATACACTGTCCGATCACTC CCTGTGTACCGTGACCTTCTCTGCGATCGTCATGGTCATGGGCATCGTCCTGTCCGCCCCAAGAACCCTGCGTCA TGTCTCCTTCATGTCGATGTTCTCAGGTAAGTGAACTCATGTCACTGCAATGTTTGCAACCTGTGATTCGCTAAC AATGTCAGCGGCTTGTATGGGTCTGGCCATCCTGTTGTTCCTCATTTTCGCGGGAATCGAGACGGCACCCCTGGA CTTTCCGACCGATGGTCCTGTGCGAACATACGCCTTCCCCTTGCCCGGCACCAGCTGGGTGGATTGCATGAACGC CGTGCTGAACATCACCTTCCTCTGGGTGCCCCAGATTCTCTTCCCCACCTTCATCGCGGAGATGGAGCACCCGGA GGACTTCCCCAAGTCGTTGGCGGTCTTGGCCATCATTTCCACCGTTCTCTTCATCGTGCCGCCCGCCATCGGCTT CCGCTACCTGGGCCAATACGCCACTGCACCCGCTTTTGGCAGTCTGGGTCTTGTGAAGTACAGGAAGGCCTCCTT TGGTTTTGTCATCGTGCCTACATTGATCATCGGCGCCATCTACGCCAACGTCACCGCTAAATTCATCTATTCTCA CCTGTTGGGTACCTCCAGACACGCACACAGCAACACCGTCGTGGGATGGGGAGTGTGGGCCCTGGTGATGATTGG CATCTGGGTACTGGGATTCATCTTTTCCGAGGTCGTCCCCAGCATGGGCGACTTTCTGTCGTTACTGGGTGCCGC CTTTGACTCCTTCTTCGGCTTCATCTTCTTCGCCGTAGCGTACTGGCATTTGTACCGGGGGAAGCTCTTTGCGGG ACTCGGGCGCACGAGCATGACCCTGCTGCATGCCTTCATCATGGCTTGTGGCATGTTTCTGTTGGGACCGGGTTT GTATGCGGCAGTCGAGGCCATCATCACGGATTACTCGGGGTCGGTTTCCCCGGCGTTCAGTTGTGCCAGTCTGGG AATCTGA |