Protein ID | Ani_SJS72_1|g5709.t1 |
Gene name | |
Location | scaffold_040:100077..102245 |
Strand | + |
Gene length (bp) | 2168 |
Transcript length (bp) | 1587 |
Coding sequence length (bp) | 1587 |
Protein length (aa) | 529 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF13520 | AA_permease_2 | Amino acid permease | 3.7E-50 | 49 | 504 |
PF00324 | AA_permease | Amino acid permease | 3.6E-24 | 68 | 514 |
GO Term | Description | Terminal node |
---|---|---|
GO:0055085 | transmembrane transport | Yes |
GO:0016020 | membrane | Yes |
GO:0022857 | transmembrane transporter activity | Yes |
GO:0009987 | cellular process | No |
GO:0110165 | cellular anatomical entity | No |
GO:0005215 | transporter activity | No |
GO:0005575 | cellular_component | No |
GO:0003674 | molecular_function | No |
GO:0006810 | transport | No |
GO:0008150 | biological_process | No |
GO:0051234 | establishment of localization | No |
GO:0051179 | localization | No |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 70 | 0.5 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 48 | 70 | 22 |
2 | 80 | 102 | 22 |
3 | 134 | 156 | 22 |
4 | 176 | 198 | 22 |
5 | 203 | 225 | 22 |
6 | 240 | 262 | 22 |
7 | 283 | 305 | 22 |
8 | 334 | 356 | 22 |
9 | 384 | 403 | 19 |
10 | 413 | 435 | 22 |
11 | 462 | 484 | 22 |
12 | 494 | 516 | 22 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS72_1|g5709.t1 MARNSDVEHSIELRAPTNRDSGTPSKATFSNDAYELARVGKKEVLKRRFGLTSTVGFACSLMLTWEAVIMNIGLG LTNGGPAGLVYGFLGVWAGIISVFISMGELASMMPSAGGQYHWVSILAPRSARKFLSHVTGSVCIIAWTAAPTAA IYLAASVLQSTIAMNIPSYDPKGWHITLIMWAILLVCTVLNTWLGMILPVIEVLILLVHVLGFFAVLVPLVYLGP KADPRSIFTVSFDYGGWGDLTLATFIGLKGTVAAFVGTDGAVHMAEEVANSSRVVPRSMLLALMINGATGFAILI AFLFTAGDLLKIVESSASYPFMYMLASSTGSKGAAVVLSSMMAILQACAGLAGISSGSRMLWSFSREQAIPGWRW VRQVNQRTLVPFHSTLVVVVAAGLLSLINIGSAVVLNIILSLVLEAFFASYMISLTLLLYRRLRGDLTEPGQGGG VLNWGPFRVKGWLGTANNIFAIAYSIIMMFFGCWPPENHPAPKNINYSIVIFAGVTLISIIYYVGWARKHYQGPL AEL* |
Coding | >Ani_SJS72_1|g5709.t1 ATGGCCAGGAACAGCGATGTTGAACATTCGATCGAGCTGCGTGCTCCAACGAACCGGGATTCTGGCACGCCAAGT AAGGCTACTTTCAGCAACGATGCTTACGAGCTGGCCAGGGTCGGAAAGAAGGAGGTGTTGAAGCGACGATTTGGT CTGACGAGTACCGTCGGGTTTGCCTGCAGCTTGATGCTGACTTGGGAAGCGGTTATAATGAACATTGGCTTGGGA CTCACCAATGGTGGTCCCGCCGGTCTGGTGTATGGCTTTCTTGGAGTATGGGCAGGCATCATTTCCGTGTTCATT TCGATGGGGGAGCTAGCCAGTATGATGCCTTCGGCGGGCGGACAATATCATTGGGTGAGCATCTTGGCCCCCAGG TCGGCCAGGAAGTTTCTCAGTCATGTCACTGGCTCGGTCTGCATCATTGCGTGGACGGCTGCCCCCACAGCCGCC ATCTACCTGGCCGCCAGTGTTCTGCAGAGCACCATTGCCATGAACATCCCCAGCTATGACCCCAAAGGATGGCAC ATCACGCTGATCATGTGGGCGATTTTGCTCGTCTGCACAGTTCTGAATACTTGGCTGGGGATGATCTTACCGGTC ATTGAAGTGCTTATTCTTCTTGTCCATGTGCTTGGCTTCTTCGCCGTCTTGGTTCCGCTGGTCTATTTGGGGCCC AAGGCTGATCCGCGATCGATCTTTACTGTATCCTTCGATTACGGTGGCTGGGGTGATCTCACCTTGGCTACTTTT ATCGGATTAAAAGGCACTGTGGCTGCATTTGTTGGCACGGATGGCGCTGTTCATATGGCCGAAGAAGTCGCCAAC AGCAGCCGGGTCGTTCCCCGCTCCATGCTGTTGGCCCTCATGATCAACGGTGCAACTGGCTTTGCCATTCTGATT GCCTTCCTCTTCACCGCTGGAGACCTGCTGAAGATTGTGGAATCCAGTGCCTCGTACCCCTTCATGTACATGCTG GCGAGCTCGACCGGCAGTAAGGGCGCCGCCGTGGTTCTCTCCAGTATGATGGCCATTCTGCAAGCGTGCGCAGGA CTCGCGGGGATTTCTTCCGGCAGTCGGATGCTGTGGTCATTCTCCCGCGAGCAGGCCATTCCCGGCTGGCGCTGG GTGCGACAGGTGAACCAACGGACTCTCGTGCCCTTCCACAGCACGTTGGTGGTGGTTGTCGCGGCCGGTCTGCTC AGCCTGATTAACATCGGGTCGGCAGTGGTGCTGAACATCATCCTGTCGCTGGTGCTGGAGGCCTTCTTTGCCTCA TACATGATCTCTCTAACTCTCCTGCTCTATCGTAGATTGCGCGGCGACCTTACCGAGCCGGGTCAAGGCGGCGGT GTCCTCAACTGGGGGCCCTTCCGGGTCAAAGGGTGGTTGGGCACGGCGAATAACATTTTTGCCATTGCCTACTCG ATCATCATGATGTTCTTCGGCTGCTGGCCACCGGAGAACCACCCTGCCCCGAAGAATATTAACTACAGCATTGTC ATCTTCGCGGGAGTTACCCTCATCAGTATCATCTACTATGTGGGATGGGCGCGGAAGCACTACCAGGGTCCGCTA GCCGAGCTTTAG |
Transcript | >Ani_SJS72_1|g5709.t1 ATGGCCAGGAACAGCGATGTTGAACATTCGATCGAGCTGCGTGCTCCAACGAACCGGGATTCTGGCACGCCAAGT AAGGCTACTTTCAGCAACGATGCTTACGAGCTGGCCAGGGTCGGAAAGAAGGAGGTGTTGAAGCGACGATTTGGT CTGACGAGTACCGTCGGGTTTGCCTGCAGCTTGATGCTGACTTGGGAAGCGGTTATAATGAACATTGGCTTGGGA CTCACCAATGGTGGTCCCGCCGGTCTGGTGTATGGCTTTCTTGGAGTATGGGCAGGCATCATTTCCGTGTTCATT TCGATGGGGGAGCTAGCCAGTATGATGCCTTCGGCGGGCGGACAATATCATTGGGTGAGCATCTTGGCCCCCAGG TCGGCCAGGAAGTTTCTCAGTCATGTCACTGGCTCGGTCTGCATCATTGCGTGGACGGCTGCCCCCACAGCCGCC ATCTACCTGGCCGCCAGTGTTCTGCAGAGCACCATTGCCATGAACATCCCCAGCTATGACCCCAAAGGATGGCAC ATCACGCTGATCATGTGGGCGATTTTGCTCGTCTGCACAGTTCTGAATACTTGGCTGGGGATGATCTTACCGGTC ATTGAAGTGCTTATTCTTCTTGTCCATGTGCTTGGCTTCTTCGCCGTCTTGGTTCCGCTGGTCTATTTGGGGCCC AAGGCTGATCCGCGATCGATCTTTACTGTATCCTTCGATTACGGTGGCTGGGGTGATCTCACCTTGGCTACTTTT ATCGGATTAAAAGGCACTGTGGCTGCATTTGTTGGCACGGATGGCGCTGTTCATATGGCCGAAGAAGTCGCCAAC AGCAGCCGGGTCGTTCCCCGCTCCATGCTGTTGGCCCTCATGATCAACGGTGCAACTGGCTTTGCCATTCTGATT GCCTTCCTCTTCACCGCTGGAGACCTGCTGAAGATTGTGGAATCCAGTGCCTCGTACCCCTTCATGTACATGCTG GCGAGCTCGACCGGCAGTAAGGGCGCCGCCGTGGTTCTCTCCAGTATGATGGCCATTCTGCAAGCGTGCGCAGGA CTCGCGGGGATTTCTTCCGGCAGTCGGATGCTGTGGTCATTCTCCCGCGAGCAGGCCATTCCCGGCTGGCGCTGG GTGCGACAGGTGAACCAACGGACTCTCGTGCCCTTCCACAGCACGTTGGTGGTGGTTGTCGCGGCCGGTCTGCTC AGCCTGATTAACATCGGGTCGGCAGTGGTGCTGAACATCATCCTGTCGCTGGTGCTGGAGGCCTTCTTTGCCTCA TACATGATCTCTCTAACTCTCCTGCTCTATCGTAGATTGCGCGGCGACCTTACCGAGCCGGGTCAAGGCGGCGGT GTCCTCAACTGGGGGCCCTTCCGGGTCAAAGGGTGGTTGGGCACGGCGAATAACATTTTTGCCATTGCCTACTCG ATCATCATGATGTTCTTCGGCTGCTGGCCACCGGAGAACCACCCTGCCCCGAAGAATATTAACTACAGCATTGTC ATCTTCGCGGGAGTTACCCTCATCAGTATCATCTACTATGTGGGATGGGCGCGGAAGCACTACCAGGGTCCGCTA GCCGAGCTTTAG |
Gene | >Ani_SJS72_1|g5709.t1 ATGGCCAGGAACAGCGATGTTGAACATTCGATCGAGCTGCGTGCTCCAACGAACCGGGATTCTGGCACGCCAAGT AAGGCTACTTTCAGCAACGATGCTTACGAGCTGGCCAGGGTCGGAAAGAAGGAGGTGTTGAAGGTAACCAACACG CGTGTTTACCCCGAGATTTTACTCCCATCAGCCGCTGAGATCTACCCTTGCTAGCGACGATTTGGTCTGACGAGT ACCGTCGGGTTTGCCTGCAGCTTGATGCTGACTTGGGAAGCGGTTATAATGTATGCGATATTTTCTTATTATTTG ATTTTCTTTTTCTTTAACCCCTCCTCCCGGTTCCCCACTTCCCCCCTTGCTTTTTATCCCGTCAAATCTGTACAT GCTAATAGGGTCATTAGGAACATTGGCTTGGGACTCACCAAGTAAGGCCTGCCACGGAATGAACTTGCCTCTGAA AGAAAAAAATGTCTGTTAACCTTCGTGCAGTGGTGGTCCCGCCGGTCTGGTGTATGGCTTTCTTGGAGTATGGGC AGGCATCATTTCCGTGTTCATTTCGATGGGGGAGCTAGCCAGTATGATGCCTTCGGTATGTGTCCGACACTTGCT GCAGCTGAGAATGAGCCTAATTTCTCACCACAGGCGGGCGGACAATATCATTGGGTGAGCATCTTGGCCCCCAGG TCGGCCAGGAAGTTTCTCAGTCATGTCACTGGTATGTGTGCAACTCCATGTGCCGAATATGCGAACCGCGGTCGG AATTGGCTAACGCAAAGGAAATTCCAGGCTCGGTCTGCATCATTGCGTGGACGGCTGCCCCCACAGCCGCCATCT ACCTGGCCGCCAGTGTTCTGCAGAGCACCATTGCCATGAACATCCCCAGCTATGACCCCAAAGGATGGCACATCA CGCTGATCATGTGGGCGATTTTGCTCGTCTGCACAGTTCTGAATACTTGGCTGGGGATGATCTTACCGGTCATTG AAGTGCTTATTCTTCTTGTCCATGTGCTTGGCTTCTTCGCCGTCTTGGTTCCGCTGGTCTATTTGGGGCCCAAGG CTGATCCGCGATCGATCTTTACTGTATCCTTCGATTACGGTGGCTGGGGTGATCTCACCTTGGCTACTTTTATCG GATTAAAAGGCACTGTGGCTGCATTTGTTGGTAAGGCAGACTTCCCGCGTCTTATCGACTGCAACATAATGGACT GACTCGGTTTTGTTCACTAGGCACGGATGGCGCTGTTCATGTAAGTGCTTCCTTCTCGGTGTTTAACCGCTGTCC GAGTCAGTCACTAACTCAACTCCTTGCAGATGGCCGAAGAAGTCGCCAACAGCAGCCGGGTCGTTCCCCGCTCCA TGCTGTTGGCCCTCATGATCAACGGTGCAACTGGCTTTGCCATTCTGATTGCCTTCCTCTTCACCGCTGGAGACC TGCTGAAGATTGTGGAATCCAGTGCCTCGTACCCCTTCATGTACATGCTGGCGAGCTCGACCGGCAGTAAGGGCG CCGCCGTGGTTCTCTCCAGTATGATGGCCATTCTGCAAGCGTGCGCAGGACTCGCGGGGATTTCTTCCGGCAGTC GGATGCTGTGGTCATTCTCCCGCGAGCAGGCCATTCCCGGCTGGCGCTGGGTGCGACAGGTATGTGATGGACCTA ACCCCCATCTACCCCCAGGCTGTTTTTGTTGGGAAGATTCTAATTGCGGTCTGTCATATCTACAGGTGAACCAAC GGACTCTCGTGCCCTTCCACAGCACGTTGGTGGTGGTTGTCGCGGCCGGTCTGCTCAGCCTGATTAACATCGGGT CGGCAGTGGTGCTGAACATCATCCTGTCGCTGGTGCTGGAGGCCTTCTTTGCCTCATACATGATCTCTCTAACTC TCCTGCTCTATCGTAGATTGCGCGGCGACCTTACCGAGCCGGGTCAAGGCGGCGGTGTCCTCAACTGGGGGCCCT TCCGGGTCAAAGGGTGGTTGGGCACGGCGAATAACATTTTTGCCATTGCCTACTCGATCATCATGATGTTCTTCG GCTGCTGGCCACCGGAGAACCACCCTGCCCCGAAGAATATTAACTACAGCATTGTCATCTTCGCGGGAGTTACCC TCATCAGTATCATCTACTATGTGGGATGGGCGCGGAAGCACTACCAGGGTCCGCTAGCCGAGCTTTAG |