© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS72_1|g5709.t1 |
| Gene name | |
| Location | scaffold_040:100077..102245 |
| Strand | + |
| Gene length (bp) | 2168 |
| Transcript length (bp) | 1587 |
| Coding sequence length (bp) | 1587 |
| Protein length (aa) | 529 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF13520 | AA_permease_2 | Amino acid permease | 3.7E-50 | 49 | 504 |
| PF00324 | AA_permease | Amino acid permease | 3.6E-24 | 68 | 514 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0055085 | transmembrane transport | Yes |
| GO:0016020 | membrane | Yes |
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0009987 | cellular process | No |
| GO:0110165 | cellular anatomical entity | No |
| GO:0005215 | transporter activity | No |
| GO:0005575 | cellular_component | No |
| GO:0003674 | molecular_function | No |
| GO:0006810 | transport | No |
| GO:0008150 | biological_process | No |
| GO:0051234 | establishment of localization | No |
| GO:0051179 | localization | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 70 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 48 | 70 | 22 |
| 2 | 80 | 102 | 22 |
| 3 | 134 | 156 | 22 |
| 4 | 176 | 198 | 22 |
| 5 | 203 | 225 | 22 |
| 6 | 240 | 262 | 22 |
| 7 | 283 | 305 | 22 |
| 8 | 334 | 356 | 22 |
| 9 | 384 | 403 | 19 |
| 10 | 413 | 435 | 22 |
| 11 | 462 | 484 | 22 |
| 12 | 494 | 516 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS72_1|g5709.t1 MARNSDVEHSIELRAPTNRDSGTPSKATFSNDAYELARVGKKEVLKRRFGLTSTVGFACSLMLTWEAVIMNIGLG LTNGGPAGLVYGFLGVWAGIISVFISMGELASMMPSAGGQYHWVSILAPRSARKFLSHVTGSVCIIAWTAAPTAA IYLAASVLQSTIAMNIPSYDPKGWHITLIMWAILLVCTVLNTWLGMILPVIEVLILLVHVLGFFAVLVPLVYLGP KADPRSIFTVSFDYGGWGDLTLATFIGLKGTVAAFVGTDGAVHMAEEVANSSRVVPRSMLLALMINGATGFAILI AFLFTAGDLLKIVESSASYPFMYMLASSTGSKGAAVVLSSMMAILQACAGLAGISSGSRMLWSFSREQAIPGWRW VRQVNQRTLVPFHSTLVVVVAAGLLSLINIGSAVVLNIILSLVLEAFFASYMISLTLLLYRRLRGDLTEPGQGGG VLNWGPFRVKGWLGTANNIFAIAYSIIMMFFGCWPPENHPAPKNINYSIVIFAGVTLISIIYYVGWARKHYQGPL AEL* |
| Coding | >Ani_SJS72_1|g5709.t1 ATGGCCAGGAACAGCGATGTTGAACATTCGATCGAGCTGCGTGCTCCAACGAACCGGGATTCTGGCACGCCAAGT AAGGCTACTTTCAGCAACGATGCTTACGAGCTGGCCAGGGTCGGAAAGAAGGAGGTGTTGAAGCGACGATTTGGT CTGACGAGTACCGTCGGGTTTGCCTGCAGCTTGATGCTGACTTGGGAAGCGGTTATAATGAACATTGGCTTGGGA CTCACCAATGGTGGTCCCGCCGGTCTGGTGTATGGCTTTCTTGGAGTATGGGCAGGCATCATTTCCGTGTTCATT TCGATGGGGGAGCTAGCCAGTATGATGCCTTCGGCGGGCGGACAATATCATTGGGTGAGCATCTTGGCCCCCAGG TCGGCCAGGAAGTTTCTCAGTCATGTCACTGGCTCGGTCTGCATCATTGCGTGGACGGCTGCCCCCACAGCCGCC ATCTACCTGGCCGCCAGTGTTCTGCAGAGCACCATTGCCATGAACATCCCCAGCTATGACCCCAAAGGATGGCAC ATCACGCTGATCATGTGGGCGATTTTGCTCGTCTGCACAGTTCTGAATACTTGGCTGGGGATGATCTTACCGGTC ATTGAAGTGCTTATTCTTCTTGTCCATGTGCTTGGCTTCTTCGCCGTCTTGGTTCCGCTGGTCTATTTGGGGCCC AAGGCTGATCCGCGATCGATCTTTACTGTATCCTTCGATTACGGTGGCTGGGGTGATCTCACCTTGGCTACTTTT ATCGGATTAAAAGGCACTGTGGCTGCATTTGTTGGCACGGATGGCGCTGTTCATATGGCCGAAGAAGTCGCCAAC AGCAGCCGGGTCGTTCCCCGCTCCATGCTGTTGGCCCTCATGATCAACGGTGCAACTGGCTTTGCCATTCTGATT GCCTTCCTCTTCACCGCTGGAGACCTGCTGAAGATTGTGGAATCCAGTGCCTCGTACCCCTTCATGTACATGCTG GCGAGCTCGACCGGCAGTAAGGGCGCCGCCGTGGTTCTCTCCAGTATGATGGCCATTCTGCAAGCGTGCGCAGGA CTCGCGGGGATTTCTTCCGGCAGTCGGATGCTGTGGTCATTCTCCCGCGAGCAGGCCATTCCCGGCTGGCGCTGG GTGCGACAGGTGAACCAACGGACTCTCGTGCCCTTCCACAGCACGTTGGTGGTGGTTGTCGCGGCCGGTCTGCTC AGCCTGATTAACATCGGGTCGGCAGTGGTGCTGAACATCATCCTGTCGCTGGTGCTGGAGGCCTTCTTTGCCTCA TACATGATCTCTCTAACTCTCCTGCTCTATCGTAGATTGCGCGGCGACCTTACCGAGCCGGGTCAAGGCGGCGGT GTCCTCAACTGGGGGCCCTTCCGGGTCAAAGGGTGGTTGGGCACGGCGAATAACATTTTTGCCATTGCCTACTCG ATCATCATGATGTTCTTCGGCTGCTGGCCACCGGAGAACCACCCTGCCCCGAAGAATATTAACTACAGCATTGTC ATCTTCGCGGGAGTTACCCTCATCAGTATCATCTACTATGTGGGATGGGCGCGGAAGCACTACCAGGGTCCGCTA GCCGAGCTTTAG |
| Transcript | >Ani_SJS72_1|g5709.t1 ATGGCCAGGAACAGCGATGTTGAACATTCGATCGAGCTGCGTGCTCCAACGAACCGGGATTCTGGCACGCCAAGT AAGGCTACTTTCAGCAACGATGCTTACGAGCTGGCCAGGGTCGGAAAGAAGGAGGTGTTGAAGCGACGATTTGGT CTGACGAGTACCGTCGGGTTTGCCTGCAGCTTGATGCTGACTTGGGAAGCGGTTATAATGAACATTGGCTTGGGA CTCACCAATGGTGGTCCCGCCGGTCTGGTGTATGGCTTTCTTGGAGTATGGGCAGGCATCATTTCCGTGTTCATT TCGATGGGGGAGCTAGCCAGTATGATGCCTTCGGCGGGCGGACAATATCATTGGGTGAGCATCTTGGCCCCCAGG TCGGCCAGGAAGTTTCTCAGTCATGTCACTGGCTCGGTCTGCATCATTGCGTGGACGGCTGCCCCCACAGCCGCC ATCTACCTGGCCGCCAGTGTTCTGCAGAGCACCATTGCCATGAACATCCCCAGCTATGACCCCAAAGGATGGCAC ATCACGCTGATCATGTGGGCGATTTTGCTCGTCTGCACAGTTCTGAATACTTGGCTGGGGATGATCTTACCGGTC ATTGAAGTGCTTATTCTTCTTGTCCATGTGCTTGGCTTCTTCGCCGTCTTGGTTCCGCTGGTCTATTTGGGGCCC AAGGCTGATCCGCGATCGATCTTTACTGTATCCTTCGATTACGGTGGCTGGGGTGATCTCACCTTGGCTACTTTT ATCGGATTAAAAGGCACTGTGGCTGCATTTGTTGGCACGGATGGCGCTGTTCATATGGCCGAAGAAGTCGCCAAC AGCAGCCGGGTCGTTCCCCGCTCCATGCTGTTGGCCCTCATGATCAACGGTGCAACTGGCTTTGCCATTCTGATT GCCTTCCTCTTCACCGCTGGAGACCTGCTGAAGATTGTGGAATCCAGTGCCTCGTACCCCTTCATGTACATGCTG GCGAGCTCGACCGGCAGTAAGGGCGCCGCCGTGGTTCTCTCCAGTATGATGGCCATTCTGCAAGCGTGCGCAGGA CTCGCGGGGATTTCTTCCGGCAGTCGGATGCTGTGGTCATTCTCCCGCGAGCAGGCCATTCCCGGCTGGCGCTGG GTGCGACAGGTGAACCAACGGACTCTCGTGCCCTTCCACAGCACGTTGGTGGTGGTTGTCGCGGCCGGTCTGCTC AGCCTGATTAACATCGGGTCGGCAGTGGTGCTGAACATCATCCTGTCGCTGGTGCTGGAGGCCTTCTTTGCCTCA TACATGATCTCTCTAACTCTCCTGCTCTATCGTAGATTGCGCGGCGACCTTACCGAGCCGGGTCAAGGCGGCGGT GTCCTCAACTGGGGGCCCTTCCGGGTCAAAGGGTGGTTGGGCACGGCGAATAACATTTTTGCCATTGCCTACTCG ATCATCATGATGTTCTTCGGCTGCTGGCCACCGGAGAACCACCCTGCCCCGAAGAATATTAACTACAGCATTGTC ATCTTCGCGGGAGTTACCCTCATCAGTATCATCTACTATGTGGGATGGGCGCGGAAGCACTACCAGGGTCCGCTA GCCGAGCTTTAG |
| Gene | >Ani_SJS72_1|g5709.t1 ATGGCCAGGAACAGCGATGTTGAACATTCGATCGAGCTGCGTGCTCCAACGAACCGGGATTCTGGCACGCCAAGT AAGGCTACTTTCAGCAACGATGCTTACGAGCTGGCCAGGGTCGGAAAGAAGGAGGTGTTGAAGGTAACCAACACG CGTGTTTACCCCGAGATTTTACTCCCATCAGCCGCTGAGATCTACCCTTGCTAGCGACGATTTGGTCTGACGAGT ACCGTCGGGTTTGCCTGCAGCTTGATGCTGACTTGGGAAGCGGTTATAATGTATGCGATATTTTCTTATTATTTG ATTTTCTTTTTCTTTAACCCCTCCTCCCGGTTCCCCACTTCCCCCCTTGCTTTTTATCCCGTCAAATCTGTACAT GCTAATAGGGTCATTAGGAACATTGGCTTGGGACTCACCAAGTAAGGCCTGCCACGGAATGAACTTGCCTCTGAA AGAAAAAAATGTCTGTTAACCTTCGTGCAGTGGTGGTCCCGCCGGTCTGGTGTATGGCTTTCTTGGAGTATGGGC AGGCATCATTTCCGTGTTCATTTCGATGGGGGAGCTAGCCAGTATGATGCCTTCGGTATGTGTCCGACACTTGCT GCAGCTGAGAATGAGCCTAATTTCTCACCACAGGCGGGCGGACAATATCATTGGGTGAGCATCTTGGCCCCCAGG TCGGCCAGGAAGTTTCTCAGTCATGTCACTGGTATGTGTGCAACTCCATGTGCCGAATATGCGAACCGCGGTCGG AATTGGCTAACGCAAAGGAAATTCCAGGCTCGGTCTGCATCATTGCGTGGACGGCTGCCCCCACAGCCGCCATCT ACCTGGCCGCCAGTGTTCTGCAGAGCACCATTGCCATGAACATCCCCAGCTATGACCCCAAAGGATGGCACATCA CGCTGATCATGTGGGCGATTTTGCTCGTCTGCACAGTTCTGAATACTTGGCTGGGGATGATCTTACCGGTCATTG AAGTGCTTATTCTTCTTGTCCATGTGCTTGGCTTCTTCGCCGTCTTGGTTCCGCTGGTCTATTTGGGGCCCAAGG CTGATCCGCGATCGATCTTTACTGTATCCTTCGATTACGGTGGCTGGGGTGATCTCACCTTGGCTACTTTTATCG GATTAAAAGGCACTGTGGCTGCATTTGTTGGTAAGGCAGACTTCCCGCGTCTTATCGACTGCAACATAATGGACT GACTCGGTTTTGTTCACTAGGCACGGATGGCGCTGTTCATGTAAGTGCTTCCTTCTCGGTGTTTAACCGCTGTCC GAGTCAGTCACTAACTCAACTCCTTGCAGATGGCCGAAGAAGTCGCCAACAGCAGCCGGGTCGTTCCCCGCTCCA TGCTGTTGGCCCTCATGATCAACGGTGCAACTGGCTTTGCCATTCTGATTGCCTTCCTCTTCACCGCTGGAGACC TGCTGAAGATTGTGGAATCCAGTGCCTCGTACCCCTTCATGTACATGCTGGCGAGCTCGACCGGCAGTAAGGGCG CCGCCGTGGTTCTCTCCAGTATGATGGCCATTCTGCAAGCGTGCGCAGGACTCGCGGGGATTTCTTCCGGCAGTC GGATGCTGTGGTCATTCTCCCGCGAGCAGGCCATTCCCGGCTGGCGCTGGGTGCGACAGGTATGTGATGGACCTA ACCCCCATCTACCCCCAGGCTGTTTTTGTTGGGAAGATTCTAATTGCGGTCTGTCATATCTACAGGTGAACCAAC GGACTCTCGTGCCCTTCCACAGCACGTTGGTGGTGGTTGTCGCGGCCGGTCTGCTCAGCCTGATTAACATCGGGT CGGCAGTGGTGCTGAACATCATCCTGTCGCTGGTGCTGGAGGCCTTCTTTGCCTCATACATGATCTCTCTAACTC TCCTGCTCTATCGTAGATTGCGCGGCGACCTTACCGAGCCGGGTCAAGGCGGCGGTGTCCTCAACTGGGGGCCCT TCCGGGTCAAAGGGTGGTTGGGCACGGCGAATAACATTTTTGCCATTGCCTACTCGATCATCATGATGTTCTTCG GCTGCTGGCCACCGGAGAACCACCCTGCCCCGAAGAATATTAACTACAGCATTGTCATCTTCGCGGGAGTTACCC TCATCAGTATCATCTACTATGTGGGATGGGCGCGGAAGCACTACCAGGGTCCGCTAGCCGAGCTTTAG |