© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS72_1|g5708.t1 |
| Gene name | |
| Location | scaffold_040:97756..98836 |
| Strand | - |
| Gene length (bp) | 1080 |
| Transcript length (bp) | 909 |
| Coding sequence length (bp) | 909 |
| Protein length (aa) | 303 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 27 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 5 | 27 | 22 |
| 2 | 40 | 62 | 22 |
| 3 | 89 | 111 | 22 |
| 4 | 118 | 140 | 22 |
| 5 | 160 | 182 | 22 |
| 6 | 195 | 217 | 22 |
| 7 | 232 | 254 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS72_1|g5708.t1 MTDHSAAVKVVTCFLLIVSFIAVVACLTTNWQVLRRKVSSVALLLSTLIASIASGAAVSVAATHGLGQASPLTDA QVVVMQKALYSMEVLYVLTLGLGKLSVMVLFYSLLSSTGQSKSVLAATGLLLIWVVVMVIVVCLQCHPPEVWNIV GGTCLDLSGIWIAFGVMNVLVEIMIIAVPSFIIFRLKLSLKRRLVVISCFGIRILDIAGSIVQLCYVRNFKIHAD SPMPTNVWQWAICSQVLQTVAILSACVPYLREFLESFPSGMFKPTELKHPTVQSAYNATKCSDSDIELMRPESTK DT* |
| Coding | >Ani_SJS72_1|g5708.t1 ATGACAGACCATTCCGCAGCAGTCAAGGTCGTGACATGCTTCCTCCTCATCGTCTCGTTCATCGCAGTCGTAGCC TGTTTGACGACAAACTGGCAGGTTCTGAGGAGGAAGGTGTCTAGTGTGGCGCTCCTTTTGAGCACTTTGATCGCA TCGATTGCCTCCGGGGCAGCTGTATCCGTCGCTGCAACTCATGGCTTGGGACAGGCTTCCCCCCTCACAGATGCC CAGGTGGTCGTCATGCAAAAGGCCCTCTACTCCATGGAGGTGCTGTATGTTTTGACTCTGGGACTGGGAAAGCTA TCTGTCATGGTTCTCTTCTACAGTCTGCTCTCGTCGACAGGCCAGTCGAAGTCCGTCCTGGCAGCGACGGGTCTA CTTTTAATATGGGTTGTGGTAATGGTCATTGTGGTATGCCTGCAATGCCATCCACCCGAAGTTTGGAACATCGTC GGCGGAACGTGTCTTGACTTGTCCGGGATTTGGATAGCATTCGGGGTCATGAACGTCTTGGTCGAGATCATGATT ATCGCAGTTCCGTCCTTCATCATCTTCCGTCTGAAACTGAGTCTGAAAAGACGCTTGGTCGTCATAAGCTGCTTC GGCATCCGGATCCTGGACATCGCGGGCAGTATTGTACAGCTATGCTACGTCCGTAATTTCAAGATCCACGCCGAC TCCCCAATGCCGACCAATGTTTGGCAATGGGCAATTTGCAGTCAAGTGCTTCAAACAGTGGCTATCTTATCTGCC TGTGTGCCATACCTTCGAGAGTTCCTGGAGTCGTTCCCCAGTGGTATGTTCAAGCCGACTGAACTCAAACATCCT ACGGTGCAGTCGGCATACAATGCGACCAAATGTTCGGACAGCGATATAGAATTAATGAGGCCGGAATCAACAAAA GATACTTAG |
| Transcript | >Ani_SJS72_1|g5708.t1 ATGACAGACCATTCCGCAGCAGTCAAGGTCGTGACATGCTTCCTCCTCATCGTCTCGTTCATCGCAGTCGTAGCC TGTTTGACGACAAACTGGCAGGTTCTGAGGAGGAAGGTGTCTAGTGTGGCGCTCCTTTTGAGCACTTTGATCGCA TCGATTGCCTCCGGGGCAGCTGTATCCGTCGCTGCAACTCATGGCTTGGGACAGGCTTCCCCCCTCACAGATGCC CAGGTGGTCGTCATGCAAAAGGCCCTCTACTCCATGGAGGTGCTGTATGTTTTGACTCTGGGACTGGGAAAGCTA TCTGTCATGGTTCTCTTCTACAGTCTGCTCTCGTCGACAGGCCAGTCGAAGTCCGTCCTGGCAGCGACGGGTCTA CTTTTAATATGGGTTGTGGTAATGGTCATTGTGGTATGCCTGCAATGCCATCCACCCGAAGTTTGGAACATCGTC GGCGGAACGTGTCTTGACTTGTCCGGGATTTGGATAGCATTCGGGGTCATGAACGTCTTGGTCGAGATCATGATT ATCGCAGTTCCGTCCTTCATCATCTTCCGTCTGAAACTGAGTCTGAAAAGACGCTTGGTCGTCATAAGCTGCTTC GGCATCCGGATCCTGGACATCGCGGGCAGTATTGTACAGCTATGCTACGTCCGTAATTTCAAGATCCACGCCGAC TCCCCAATGCCGACCAATGTTTGGCAATGGGCAATTTGCAGTCAAGTGCTTCAAACAGTGGCTATCTTATCTGCC TGTGTGCCATACCTTCGAGAGTTCCTGGAGTCGTTCCCCAGTGGTATGTTCAAGCCGACTGAACTCAAACATCCT ACGGTGCAGTCGGCATACAATGCGACCAAATGTTCGGACAGCGATATAGAATTAATGAGGCCGGAATCAACAAAA GATACTTAG |
| Gene | >Ani_SJS72_1|g5708.t1 ATGACAGACCATTCCGCAGCAGTCAAGGTCGTGACATGCTTCCTCCTCATCGTCTCGTTCATCGCAGTCGTAGCC TGTTTGACGACAAACTGGCAGGTTCTGAGGAGGAAGGTGTCTAGTGTGGCGCTCCTTTTGAGCACTTTGGTTAGC TAGCTCTCTCAGATAACGTGTCCTCGTGCCTTTTGTATAGTAAAACTGACTGCCAGTAGATCGCATCGATTGCCT CCGGGGCAGCTGTATCCGTCGCTGCAACTCATGGCTTGGGACAGGCTTCCCCCCTCACAGATGCCCAGGTGGTCG TCATGCAAAAGGCCCTCTACTCCATGGAGGTGCTGTATGTTTTGACTCTGGGACTGGGAAAGCTATCTGTCATGG TTCTCTTCTACAGTCTGCTCTCGTCGACAGGCCAGTCGAAGTCCGTCCTGGCAGCGACGGGTCTACTTTTAATAT GGGTTGTGGTAATGGTCATTGTGGTATGCCTGCAATGCCATCCACCCGAAGTTTGGAACATCGTCGGCGGAACGT GTCTTGACTTGGTAAGTAAAATGCGATGCGATAACCCCAACTAAGAAAACATTGCTAATGTATACAAGTCCGGGA TTTGGATAGCATTCGGGGTCATGAACGTCTTGGTCGAGATCATGATTATCGCAGTTCCGTCCTTCATCATCTTCC GTCTGAAACTGAGTCTGAAAAGACGCTTGGTCGTCATAAGCTGCTTCGGCATCCGGATCCTGTATGTCGCAAAGC CACACCGAGTCTTACACTTCTAACCTCTTGTCTAGGGACATCGCGGGCAGTATTGTACAGCTATGCTACGTCCGT AATTTCAAGATCCACGCCGACTCCCCAATGCCGACCAATGTTTGGCAATGGGCAATTTGCAGTCAAGTGCTTCAA ACAGTGGCTATCTTATCTGCCTGTGTGCCATACCTTCGAGAGTTCCTGGAGTCGTTCCCCAGTGGTATGTTCAAG CCGACTGAACTCAAACATCCTACGGTGCAGTCGGCATACAATGCGACCAAATGTTCGGACAGCGATATAGAATTA ATGAGGCCGGAATCAACAAAAGATACTTAG |