Protein ID | Ani_SJS72_1|g5685.t1 |
Gene name | |
Location | scaffold_040:49720..51060 |
Strand | - |
Gene length (bp) | 1340 |
Transcript length (bp) | 1068 |
Coding sequence length (bp) | 1068 |
Protein length (aa) | 356 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 14 | 0.5 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 19 | 41 | 22 |
2 | 53 | 75 | 22 |
3 | 97 | 119 | 22 |
4 | 132 | 154 | 22 |
5 | 178 | 200 | 22 |
6 | 212 | 234 | 22 |
7 | 249 | 271 | 22 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS72_1|g5685.t1 MGWVHHASPEVEAESQYRLILGVCLGLTLLMIITVCLRLAIRFNARRLEASDFVMLVTMIFSIIYSALCVAQSRY GLGLPLSLRPKADLPDYTKLNYAGRPFYQLGIAGFKASLCLNYLRLISGTSKNFYRILIWAVIAVSTLGHLAGTL VLIFDCQPVERAWNPNISGSCLPAGPTFYGLAIFTIICDITIIILPIPLLLQLNIKTAQKAGVVCLFLLGLFTTI CSILRLTQIHRVAYGDGNSTMLVLWGTIEFNVGNIVTCVPFLAPLLKGAVRDFRSYSGRKGYDSRSYALQTWSKD PRSQLRSTTSAAPQPKRTPSEELILESGGVDEGGIHMTVELRVSLEKRPTTEVRE* |
Coding | >Ani_SJS72_1|g5685.t1 ATGGGCTGGGTGCACCATGCCTCGCCTGAAGTGGAAGCGGAGTCGCAATATCGCCTCATTCTAGGGGTGTGCCTG GGCTTGACCCTGTTGATGATTATCACAGTCTGCCTGCGTTTAGCAATTCGATTCAACGCCCGCCGATTGGAAGCG TCCGATTTTGTGATGCTGGTGACTATGATCTTCAGCATCATATACAGCGCATTGTGCGTCGCTCAGAGCAGGTAC GGCCTCGGATTACCCTTGTCGCTGCGCCCCAAGGCAGACCTTCCGGATTACACAAAGCTCAATTATGCCGGTCGC CCATTCTACCAACTTGGAATCGCAGGATTCAAAGCTTCCCTATGCCTCAATTATTTGCGATTGATTTCCGGAACA TCCAAGAATTTCTACCGAATCCTTATATGGGCCGTGATAGCTGTCTCGACACTTGGCCATCTTGCGGGAACATTA GTTCTGATATTCGACTGCCAGCCGGTTGAGCGCGCCTGGAACCCCAACATCTCAGGGTCGTGTCTTCCAGCAGGG CCAACATTCTATGGATTAGCCATCTTCACCATTATCTGCGACATCACCATCATCATCCTTCCCATTCCGCTGTTG CTTCAACTGAATATCAAGACCGCACAGAAAGCGGGAGTAGTTTGTCTGTTCCTGCTGGGGCTGTTCACCACGATC TGCTCTATCCTTCGCCTCACGCAAATCCATCGGGTGGCATATGGCGATGGAAATTCGACCATGTTGGTGCTGTGG GGCACAATTGAGTTCAATGTCGGGAACATTGTAACTTGTGTCCCCTTCCTCGCTCCTTTGCTGAAAGGTGCAGTG CGCGATTTCCGATCGTACAGTGGCCGGAAAGGGTACGATAGCCGGAGCTATGCTTTGCAGACCTGGTCCAAAGAC CCGCGCTCGCAGTTACGGTCGACAACTTCGGCGGCGCCGCAACCCAAACGCACGCCCAGCGAAGAGCTTATCCTC GAGAGTGGGGGCGTCGACGAGGGAGGCATTCATATGACGGTGGAGCTGCGCGTGTCGCTAGAGAAGAGGCCAACG ACAGAGGTCAGAGAGTGA |
Transcript | >Ani_SJS72_1|g5685.t1 ATGGGCTGGGTGCACCATGCCTCGCCTGAAGTGGAAGCGGAGTCGCAATATCGCCTCATTCTAGGGGTGTGCCTG GGCTTGACCCTGTTGATGATTATCACAGTCTGCCTGCGTTTAGCAATTCGATTCAACGCCCGCCGATTGGAAGCG TCCGATTTTGTGATGCTGGTGACTATGATCTTCAGCATCATATACAGCGCATTGTGCGTCGCTCAGAGCAGGTAC GGCCTCGGATTACCCTTGTCGCTGCGCCCCAAGGCAGACCTTCCGGATTACACAAAGCTCAATTATGCCGGTCGC CCATTCTACCAACTTGGAATCGCAGGATTCAAAGCTTCCCTATGCCTCAATTATTTGCGATTGATTTCCGGAACA TCCAAGAATTTCTACCGAATCCTTATATGGGCCGTGATAGCTGTCTCGACACTTGGCCATCTTGCGGGAACATTA GTTCTGATATTCGACTGCCAGCCGGTTGAGCGCGCCTGGAACCCCAACATCTCAGGGTCGTGTCTTCCAGCAGGG CCAACATTCTATGGATTAGCCATCTTCACCATTATCTGCGACATCACCATCATCATCCTTCCCATTCCGCTGTTG CTTCAACTGAATATCAAGACCGCACAGAAAGCGGGAGTAGTTTGTCTGTTCCTGCTGGGGCTGTTCACCACGATC TGCTCTATCCTTCGCCTCACGCAAATCCATCGGGTGGCATATGGCGATGGAAATTCGACCATGTTGGTGCTGTGG GGCACAATTGAGTTCAATGTCGGGAACATTGTAACTTGTGTCCCCTTCCTCGCTCCTTTGCTGAAAGGTGCAGTG CGCGATTTCCGATCGTACAGTGGCCGGAAAGGGTACGATAGCCGGAGCTATGCTTTGCAGACCTGGTCCAAAGAC CCGCGCTCGCAGTTACGGTCGACAACTTCGGCGGCGCCGCAACCCAAACGCACGCCCAGCGAAGAGCTTATCCTC GAGAGTGGGGGCGTCGACGAGGGAGGCATTCATATGACGGTGGAGCTGCGCGTGTCGCTAGAGAAGAGGCCAACG ACAGAGGTCAGAGAGTGA |
Gene | >Ani_SJS72_1|g5685.t1 ATGGGCTGGGTGCACCATGCCTCGCCTGAAGTGGAAGCGGAGTCGCAATATCGCCTCATTCTAGGGGTGTGCCTG GGCTTGACCCTGTTGATGATTATCACAGTCTGCCTGCGTTTAGCAATTCGATTCAACGCCCGCCGATTGGAAGCG TCCGATTTTGTGATGCTGGTGACTATGGTGGGTTACCTTCGGTGGATAGACGATCCGACCGCTAATCGGTGCCAG ATCTTCAGCATCATATACAGCGCATTGTGCGTCGCTCGTGAGTCGACCAAGCCTTGAGTCCAGTCTAAGCGCTCA CTTTCAACAGAGAGCAGGTACGGCCTCGGATTACCCTTGTCGCTGCGCCCCAAGGCAGACCTTCCGGATTACACA AAGGTATGCGCTGTGCCTGAATTTCAGTCAAGACGAAGTATTTATAAAAACACCAACAGCTCAATTATGCCGGTC GCCCATTCTACCAACTTGGAATCGCAGGATTCAAAGCTTCCCTATGCCTCAATTATTTGCGATTGATTTCCGGAA CATCCAAGAATTTCTACCGAATCCTTATATGGGCCGTGATAGCTGTCTCGACACTTGGCCATCTTGCGGGAACAT TAGTTCTGATATTCGACTGCCAGCCGGTGAGAGAGTGAAATATTTTCCAGTCGCAGGGCAAGCTGGCTGATATGA CGATCGAAAGGTTGAGCGCGCCTGGAACCCCAACATCTCAGGGTCGTGTCTTCCAGCAGGGCCAACATTCTATGG ATTAGCCATCTTCACCATTATCTGCGACATCACCATCATCATCCTTCCCATTCCGCTGTTGCTTCAACTGAATAT CAAGACCGCACAGAAAGCGGGAGTAGTTTGTCTGTTCCTGCTGGGGCTGTTCACCACGATCTGCTCTATCCTTCG CCTCACGCAAATCCATCGGGTGGCATATGGCGATGGAAATTCGACCATGTTGGTGCTGTGGGGCACAATTGAGTT CAATGTCGGGGTAGGTTTCCACGAGCACGCGAAATAGGATTATGCACCGAGTCACTGACTAATTGTATTAGAACA TTGTAACTTGTGTCCCCTTCCTCGCTCCTTTGCTGAAAGGTGCAGTGCGCGATTTCCGATCGTACAGTGGCCGGA AAGGGTACGATAGCCGGAGCTATGCTTTGCAGACCTGGTCCAAAGACCCGCGCTCGCAGTTACGGTCGACAACTT CGGCGGCGCCGCAACCCAAACGCACGCCCAGCGAAGAGCTTATCCTCGAGAGTGGGGGCGTCGACGAGGGAGGCA TTCATATGACGGTGGAGCTGCGCGTGTCGCTAGAGAAGAGGCCAACGACAGAGGTCAGAGAGTGA |