Fungal Genomics

at Utrecht University

General Properties

Protein IDAni_SJS72_1|g5685.t1
Gene name
Locationscaffold_040:49720..51060
Strand-
Gene length (bp)1340
Transcript length (bp)1068
Coding sequence length (bp)1068
Protein length (aa) 356

Your browser does not support drawing a protein figure.

PFAM Domains

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 14 0.5

Transmembrane Domains

Domain # Start End Length
1 19 41 22
2 53 75 22
3 97 119 22
4 132 154 22
5 178 200 22
6 212 234 22
7 249 271 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ani_SJS72_1|g5685.t1
MGWVHHASPEVEAESQYRLILGVCLGLTLLMIITVCLRLAIRFNARRLEASDFVMLVTMIFSIIYSALCVAQSRY
GLGLPLSLRPKADLPDYTKLNYAGRPFYQLGIAGFKASLCLNYLRLISGTSKNFYRILIWAVIAVSTLGHLAGTL
VLIFDCQPVERAWNPNISGSCLPAGPTFYGLAIFTIICDITIIILPIPLLLQLNIKTAQKAGVVCLFLLGLFTTI
CSILRLTQIHRVAYGDGNSTMLVLWGTIEFNVGNIVTCVPFLAPLLKGAVRDFRSYSGRKGYDSRSYALQTWSKD
PRSQLRSTTSAAPQPKRTPSEELILESGGVDEGGIHMTVELRVSLEKRPTTEVRE*
Coding >Ani_SJS72_1|g5685.t1
ATGGGCTGGGTGCACCATGCCTCGCCTGAAGTGGAAGCGGAGTCGCAATATCGCCTCATTCTAGGGGTGTGCCTG
GGCTTGACCCTGTTGATGATTATCACAGTCTGCCTGCGTTTAGCAATTCGATTCAACGCCCGCCGATTGGAAGCG
TCCGATTTTGTGATGCTGGTGACTATGATCTTCAGCATCATATACAGCGCATTGTGCGTCGCTCAGAGCAGGTAC
GGCCTCGGATTACCCTTGTCGCTGCGCCCCAAGGCAGACCTTCCGGATTACACAAAGCTCAATTATGCCGGTCGC
CCATTCTACCAACTTGGAATCGCAGGATTCAAAGCTTCCCTATGCCTCAATTATTTGCGATTGATTTCCGGAACA
TCCAAGAATTTCTACCGAATCCTTATATGGGCCGTGATAGCTGTCTCGACACTTGGCCATCTTGCGGGAACATTA
GTTCTGATATTCGACTGCCAGCCGGTTGAGCGCGCCTGGAACCCCAACATCTCAGGGTCGTGTCTTCCAGCAGGG
CCAACATTCTATGGATTAGCCATCTTCACCATTATCTGCGACATCACCATCATCATCCTTCCCATTCCGCTGTTG
CTTCAACTGAATATCAAGACCGCACAGAAAGCGGGAGTAGTTTGTCTGTTCCTGCTGGGGCTGTTCACCACGATC
TGCTCTATCCTTCGCCTCACGCAAATCCATCGGGTGGCATATGGCGATGGAAATTCGACCATGTTGGTGCTGTGG
GGCACAATTGAGTTCAATGTCGGGAACATTGTAACTTGTGTCCCCTTCCTCGCTCCTTTGCTGAAAGGTGCAGTG
CGCGATTTCCGATCGTACAGTGGCCGGAAAGGGTACGATAGCCGGAGCTATGCTTTGCAGACCTGGTCCAAAGAC
CCGCGCTCGCAGTTACGGTCGACAACTTCGGCGGCGCCGCAACCCAAACGCACGCCCAGCGAAGAGCTTATCCTC
GAGAGTGGGGGCGTCGACGAGGGAGGCATTCATATGACGGTGGAGCTGCGCGTGTCGCTAGAGAAGAGGCCAACG
ACAGAGGTCAGAGAGTGA
Transcript >Ani_SJS72_1|g5685.t1
ATGGGCTGGGTGCACCATGCCTCGCCTGAAGTGGAAGCGGAGTCGCAATATCGCCTCATTCTAGGGGTGTGCCTG
GGCTTGACCCTGTTGATGATTATCACAGTCTGCCTGCGTTTAGCAATTCGATTCAACGCCCGCCGATTGGAAGCG
TCCGATTTTGTGATGCTGGTGACTATGATCTTCAGCATCATATACAGCGCATTGTGCGTCGCTCAGAGCAGGTAC
GGCCTCGGATTACCCTTGTCGCTGCGCCCCAAGGCAGACCTTCCGGATTACACAAAGCTCAATTATGCCGGTCGC
CCATTCTACCAACTTGGAATCGCAGGATTCAAAGCTTCCCTATGCCTCAATTATTTGCGATTGATTTCCGGAACA
TCCAAGAATTTCTACCGAATCCTTATATGGGCCGTGATAGCTGTCTCGACACTTGGCCATCTTGCGGGAACATTA
GTTCTGATATTCGACTGCCAGCCGGTTGAGCGCGCCTGGAACCCCAACATCTCAGGGTCGTGTCTTCCAGCAGGG
CCAACATTCTATGGATTAGCCATCTTCACCATTATCTGCGACATCACCATCATCATCCTTCCCATTCCGCTGTTG
CTTCAACTGAATATCAAGACCGCACAGAAAGCGGGAGTAGTTTGTCTGTTCCTGCTGGGGCTGTTCACCACGATC
TGCTCTATCCTTCGCCTCACGCAAATCCATCGGGTGGCATATGGCGATGGAAATTCGACCATGTTGGTGCTGTGG
GGCACAATTGAGTTCAATGTCGGGAACATTGTAACTTGTGTCCCCTTCCTCGCTCCTTTGCTGAAAGGTGCAGTG
CGCGATTTCCGATCGTACAGTGGCCGGAAAGGGTACGATAGCCGGAGCTATGCTTTGCAGACCTGGTCCAAAGAC
CCGCGCTCGCAGTTACGGTCGACAACTTCGGCGGCGCCGCAACCCAAACGCACGCCCAGCGAAGAGCTTATCCTC
GAGAGTGGGGGCGTCGACGAGGGAGGCATTCATATGACGGTGGAGCTGCGCGTGTCGCTAGAGAAGAGGCCAACG
ACAGAGGTCAGAGAGTGA
Gene >Ani_SJS72_1|g5685.t1
ATGGGCTGGGTGCACCATGCCTCGCCTGAAGTGGAAGCGGAGTCGCAATATCGCCTCATTCTAGGGGTGTGCCTG
GGCTTGACCCTGTTGATGATTATCACAGTCTGCCTGCGTTTAGCAATTCGATTCAACGCCCGCCGATTGGAAGCG
TCCGATTTTGTGATGCTGGTGACTATGGTGGGTTACCTTCGGTGGATAGACGATCCGACCGCTAATCGGTGCCAG
ATCTTCAGCATCATATACAGCGCATTGTGCGTCGCTCGTGAGTCGACCAAGCCTTGAGTCCAGTCTAAGCGCTCA
CTTTCAACAGAGAGCAGGTACGGCCTCGGATTACCCTTGTCGCTGCGCCCCAAGGCAGACCTTCCGGATTACACA
AAGGTATGCGCTGTGCCTGAATTTCAGTCAAGACGAAGTATTTATAAAAACACCAACAGCTCAATTATGCCGGTC
GCCCATTCTACCAACTTGGAATCGCAGGATTCAAAGCTTCCCTATGCCTCAATTATTTGCGATTGATTTCCGGAA
CATCCAAGAATTTCTACCGAATCCTTATATGGGCCGTGATAGCTGTCTCGACACTTGGCCATCTTGCGGGAACAT
TAGTTCTGATATTCGACTGCCAGCCGGTGAGAGAGTGAAATATTTTCCAGTCGCAGGGCAAGCTGGCTGATATGA
CGATCGAAAGGTTGAGCGCGCCTGGAACCCCAACATCTCAGGGTCGTGTCTTCCAGCAGGGCCAACATTCTATGG
ATTAGCCATCTTCACCATTATCTGCGACATCACCATCATCATCCTTCCCATTCCGCTGTTGCTTCAACTGAATAT
CAAGACCGCACAGAAAGCGGGAGTAGTTTGTCTGTTCCTGCTGGGGCTGTTCACCACGATCTGCTCTATCCTTCG
CCTCACGCAAATCCATCGGGTGGCATATGGCGATGGAAATTCGACCATGTTGGTGCTGTGGGGCACAATTGAGTT
CAATGTCGGGGTAGGTTTCCACGAGCACGCGAAATAGGATTATGCACCGAGTCACTGACTAATTGTATTAGAACA
TTGTAACTTGTGTCCCCTTCCTCGCTCCTTTGCTGAAAGGTGCAGTGCGCGATTTCCGATCGTACAGTGGCCGGA
AAGGGTACGATAGCCGGAGCTATGCTTTGCAGACCTGGTCCAAAGACCCGCGCTCGCAGTTACGGTCGACAACTT
CGGCGGCGCCGCAACCCAAACGCACGCCCAGCGAAGAGCTTATCCTCGAGAGTGGGGGCGTCGACGAGGGAGGCA
TTCATATGACGGTGGAGCTGCGCGTGTCGCTAGAGAAGAGGCCAACGACAGAGGTCAGAGAGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail