Fungal Genomics

at Utrecht University

General Properties

Protein ID	Ani_SJS72_1\|g568.t1
Gene name
Location	scaffold_002:774953..776398
Strand	-
Gene length (bp)	1445
Transcript length (bp)	978
Coding sequence length (bp)	978
Protein length (aa)	326

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF02453	Reticulon	Reticulon	2.9E-28	61	219

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 40	0.45

Transmembrane Domains

Domain #	Start	End	Length
1	69	91	22
2	98	117	19
3	160	182	22
4	184	206	22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Ani_SJS72_1\|g568.t1 MADVSYPDTNGHSALAKGPIADNIKSEASRTGQEFRELRNTSPSSTTATGQPLTYYHSLLYSLLSWEQPRATAIS FASVVTFIFAARYLPLLRWFFKFIYVVLGFTAIVEVGGRLALSQSVVSSFRPRKYYTVPKETIEAVLEDLEQLID FVLIEFQRVLFAENIVHTIASFFAAFTAYWLIKFLPFWGLSLIAVTIAYMGPLVYINNREVIDAHIEHAQEVVNS QAHQLKDLAEERTAHATGVVRQYVGDYSAKAQGYMRRSATPEMARAPAPVIKKEPEAEPEIKTTDFPEAPKEEPV AAQEPVVETIEQPAEQVKSEPLLAA*
Coding	>Ani_SJS72_1\|g568.t1 ATGGCTGACGTGAGCTATCCCGACACAAATGGCCACAGCGCTCTCGCAAAGGGCCCCATTGCCGATAACATCAAG TCCGAGGCGTCCCGCACTGGTCAAGAATTCCGCGAATTGAGGAACACTAGCCCTTCATCTACCACTGCGACCGGC CAACCCTTGACCTACTACCACTCGCTGCTGTACAGCCTTTTGAGCTGGGAGCAACCCCGAGCTACGGCCATCTCC TTCGCGAGTGTTGTCACATTCATCTTCGCCGCCCGTTACCTTCCTCTCCTCCGTTGGTTCTTCAAGTTCATCTAT GTGGTTCTGGGGTTCACCGCTATTGTCGAGGTCGGTGGCAGACTTGCTCTGTCACAGAGCGTCGTGAGCTCATTC CGGCCTCGCAAATACTACACCGTGCCCAAGGAAACCATCGAGGCTGTTTTGGAGGACCTTGAGCAGCTCATCGAC TTTGTCCTCATTGAGTTCCAGCGTGTTCTGTTCGCCGAGAACATTGTCCACACCATTGCATCCTTCTTTGCCGCT TTCACCGCCTACTGGTTGATCAAGTTCCTTCCATTCTGGGGACTGTCCTTGATTGCGGTCACCATCGCGTACATG GGACCCTTGGTCTACATCAACAACCGTGAAGTCATCGATGCCCACATTGAGCACGCGCAGGAAGTTGTCAACAGC CAGGCTCACCAGCTAAAGGATCTTGCCGAAGAGCGCACTGCCCATGCCACGGGTGTTGTGAGGCAGTATGTTGGT GACTACAGCGCCAAGGCCCAGGGATACATGCGTCGCTCTGCCACCCCCGAGATGGCTAGGGCACCCGCCCCCGTT ATCAAGAAGGAGCCTGAGGCCGAGCCCGAAATCAAGACGACTGACTTCCCGGAGGCACCTAAGGAGGAACCCGTG GCCGCCCAGGAGCCCGTGGTGGAGACGATCGAACAGCCTGCTGAGCAGGTGAAGTCGGAGCCTCTTCTGGCAGCT TAG
Transcript	>Ani_SJS72_1\|g568.t1 ATGGCTGACGTGAGCTATCCCGACACAAATGGCCACAGCGCTCTCGCAAAGGGCCCCATTGCCGATAACATCAAG TCCGAGGCGTCCCGCACTGGTCAAGAATTCCGCGAATTGAGGAACACTAGCCCTTCATCTACCACTGCGACCGGC CAACCCTTGACCTACTACCACTCGCTGCTGTACAGCCTTTTGAGCTGGGAGCAACCCCGAGCTACGGCCATCTCC TTCGCGAGTGTTGTCACATTCATCTTCGCCGCCCGTTACCTTCCTCTCCTCCGTTGGTTCTTCAAGTTCATCTAT GTGGTTCTGGGGTTCACCGCTATTGTCGAGGTCGGTGGCAGACTTGCTCTGTCACAGAGCGTCGTGAGCTCATTC CGGCCTCGCAAATACTACACCGTGCCCAAGGAAACCATCGAGGCTGTTTTGGAGGACCTTGAGCAGCTCATCGAC TTTGTCCTCATTGAGTTCCAGCGTGTTCTGTTCGCCGAGAACATTGTCCACACCATTGCATCCTTCTTTGCCGCT TTCACCGCCTACTGGTTGATCAAGTTCCTTCCATTCTGGGGACTGTCCTTGATTGCGGTCACCATCGCGTACATG GGACCCTTGGTCTACATCAACAACCGTGAAGTCATCGATGCCCACATTGAGCACGCGCAGGAAGTTGTCAACAGC CAGGCTCACCAGCTAAAGGATCTTGCCGAAGAGCGCACTGCCCATGCCACGGGTGTTGTGAGGCAGTATGTTGGT GACTACAGCGCCAAGGCCCAGGGATACATGCGTCGCTCTGCCACCCCCGAGATGGCTAGGGCACCCGCCCCCGTT ATCAAGAAGGAGCCTGAGGCCGAGCCCGAAATCAAGACGACTGACTTCCCGGAGGCACCTAAGGAGGAACCCGTG GCCGCCCAGGAGCCCGTGGTGGAGACGATCGAACAGCCTGCTGAGCAGGTGAAGTCGGAGCCTCTTCTGGCAGCT TAG
Gene	>Ani_SJS72_1\|g568.t1 ATGGCTGACGTGAGCTATCCCGACACAAATGGCCACAGTAAGGTACGAGCAGTTACCGGTTCTCGTGTTTTGCTG TTCAGTGAGAGTGCATTGAAGCTGATTTAGTCTCTGATCGCAGTTCTGAATCTCCCACGCACATACTCCCAGTCT AGGTTACACGAACTGACCGTTACTCCCTCGCTTAGGCGCTCTCGCAAAGGGTAAATAGCTGGCTCCAAGCACACC TGCTTCGCGTTTACCGCTCGAAATTGGTGTCTTCATGACCAATTGATCTGACACCCAATCGATTTAGGCCCCATT GCCGATAACATCAAGTCCGAGGCGTCCCGCACTGGTCAAGAATTCCGCGAATTGAGGAACACTAGCCCTTCATCT ACCACTGCGACCGGCCAACCCTTGACCTGTACGTTATGACACGAATCAGCTTGCAGGCGCTCTCTGCTGACCCGG TCCAGACTACCACTCGCTGCTGTACAGCCTTTTGAGCGTATGTGATCCTGGATGCCGCCAGGAGGGGACCCGATT TAACTGATTGTCATAGTGGGAGCAACCCCGAGCTACGGCCATCTCCTTCGCGAGTGTTGTCACATTCATCTTCGC CGCCCGTTACCTTCCTCTCCTCCGTTGGTTCTTCAAGTTCATCTATGTGGTTCTGGGGTGTAGGTCTAAACGCAG GTCCCGCACAGGATTTACAACGTATACTGATCGCCGGTTGTACTAGTCACCGCTATTGTCGAGGTCGGTGGCAGA CTTGCTCTGTCACAGAGCGTCGTGAGCTCATTCCGGCCTCGCAAATACTACACCGTGCCCAAGGAAACCATCGAG GCTGTTTTGGAGGACCTTGAGCAGCTCATCGACTTTGTCCTCATTGAGTTCCAGCGTGTTCTGTTCGCCGAGAAC ATTGTCCACACCATTGCAGTACGTCCAAGAAACCACCAGTCACTGGCGACTCGGGCCAATACTAAATTGATGTGC AGTCCTTCTTTGCCGCTTTCACCGCCTACTGGTTGATCAAGTTCCTTCCATTCTGGGGACTGTCCTTGATTGCGG TCACCATCGCGTACATGGGACCCTTGGTCTACATCAACAACCGTGAAGTCATCGATGCCCACATTGAGCACGCGC AGGAAGTTGTCAACAGCCAGGCTCACCAGCTAAAGGATCTTGCCGAAGAGCGCACTGCCCATGCCACGGGTGTTG TGAGGCAGTATGTTGGTGACTACAGCGCCAAGGCCCAGGGATACATGCGTCGCTCTGCCACCCCCGAGATGGCTA GGGCACCCGCCCCCGTTATCAAGAAGGAGCCTGAGGCCGAGCCCGAAATCAAGACGACTGACTTCCCGGAGGCAC CTAAGGAGGAACCCGTGGCCGCCCAGGAGCCCGTGGTGGAGACGATCGAACAGCCTGCTGAGCAGGTGAAGTCGG AGCCTCTTCTGGCAGCTTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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