Fungal Genomics

at Utrecht University

General Properties

Protein IDAni_SJS72_1|g5679.t1
Gene name
Locationscaffold_040:32298..33222
Strand-
Gene length (bp)924
Transcript length (bp)849
Coding sequence length (bp)849
Protein length (aa) 283

Overview

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PFAM Domains

(None)

GO

(None)

Deeploc

Deeploc data not available for this genome

SignalP

(None)

Transmembrane Domains

Domain # Start End Length
1 182 201 19
2 208 230 22

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID3
Orthogroup11082
Change Orthofinder run
Species Protein ID
Aspergillus niger CBS 118.52 Ani_SJS14_1|g1060.t1
Aspergillus niger CBS 131.52 Ani_SJS8_1|g96.t1
Aspergillus niger CBS 147322 Ani_SJS35_1|g1742.t1
Aspergillus niger CBS 147323 Ani_SJS38_1|g4436.t1
Aspergillus niger CBS 147344 Ani_SJS70_1|g11058.t1
Aspergillus niger CBS 147345 Ani_SJS72_1|g5679.t1 (this protein)
Aspergillus niger CBS 147346 Ani_SJS75_1|g648.t1
Aspergillus niger CBS 147347 Ani_SJS76_1|g1264.t1
Aspergillus niger CBS 147353 Ani_SJS100_1|g2102.t1
Aspergillus niger CBS 147371 Ani_SJS27_1|g4990.t1
Aspergillus niger CBS 630.78 Ani_SJS18_1|g3493.t1
Aspergillus niger CBS 769.97 Ani_SJS82_1|g1949.t1

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ani_SJS72_1|g5679.t1
MPILPRLHLFEIADQPWCPDKAIEYVQLCLTHSWNLRIPLLTKTSPAAVACEVITQNLPDLSSFTLVDLCSGAGG
PTTTFESLLNTQLHDLGRPPIQFLLTDLNPRIGAWAALSKDQDNIAYISESVDATQCGRLAPRDRKECRMFNLSF
HHFDDSLAVPMLRSAIESADAFIIIELAARDFSSTLILPLLFLIPFQYTMLRFRQSPLHLFFTYLLPFFPLLMLF
DGWVSMMRCRTPDELHDLVRRSNAADMKNWEFRSGKSAVMYPVAYVHWFMGVKKTAQ*
Coding >Ani_SJS72_1|g5679.t1
ATGCCTATCCTCCCCCGCCTCCATCTCTTCGAAATCGCCGATCAGCCATGGTGTCCCGACAAGGCGATCGAATAT
GTTCAGCTATGCCTCACCCACTCCTGGAACCTCCGCATCCCTCTGCTCACAAAAACTTCTCCGGCTGCTGTTGCC
TGCGAGGTCATTACGCAGAATTTGCCTGATCTCTCGTCCTTCACCTTGGTTGATCTCTGTTCGGGCGCGGGAGGC
CCGACAACCACCTTTGAGAGTCTCCTCAATACCCAACTGCACGACCTTGGCCGCCCTCCAATCCAGTTTCTACTC
ACAGACCTAAACCCCCGCATTGGAGCATGGGCGGCCCTAAGCAAAGACCAAGATAACATAGCATATATCTCAGAA
TCAGTTGACGCAACTCAGTGTGGTCGACTGGCTCCACGCGACCGCAAGGAATGTCGGATGTTCAATCTATCCTTT
CACCATTTCGACGACTCTCTCGCTGTACCTATGTTGCGTAGTGCGATAGAATCGGCCGATGCATTTATCATAATT
GAACTTGCTGCACGCGATTTCAGCTCAACGCTGATATTGCCGCTCTTATTCTTGATTCCATTCCAATACACCATG
CTTCGGTTTAGGCAGTCTCCATTACACCTGTTCTTTACATATCTTTTGCCCTTCTTCCCCCTACTGATGCTGTTT
GATGGTTGGGTGTCGATGATGCGCTGCCGGACACCTGACGAGCTGCACGATCTAGTCAGACGGTCGAATGCAGCT
GACATGAAGAACTGGGAGTTTCGCTCGGGAAAATCGGCTGTCATGTATCCAGTTGCATACGTGCATTGGTTTATG
GGAGTGAAGAAGACGGCTCAGTAA
Transcript >Ani_SJS72_1|g5679.t1
ATGCCTATCCTCCCCCGCCTCCATCTCTTCGAAATCGCCGATCAGCCATGGTGTCCCGACAAGGCGATCGAATAT
GTTCAGCTATGCCTCACCCACTCCTGGAACCTCCGCATCCCTCTGCTCACAAAAACTTCTCCGGCTGCTGTTGCC
TGCGAGGTCATTACGCAGAATTTGCCTGATCTCTCGTCCTTCACCTTGGTTGATCTCTGTTCGGGCGCGGGAGGC
CCGACAACCACCTTTGAGAGTCTCCTCAATACCCAACTGCACGACCTTGGCCGCCCTCCAATCCAGTTTCTACTC
ACAGACCTAAACCCCCGCATTGGAGCATGGGCGGCCCTAAGCAAAGACCAAGATAACATAGCATATATCTCAGAA
TCAGTTGACGCAACTCAGTGTGGTCGACTGGCTCCACGCGACCGCAAGGAATGTCGGATGTTCAATCTATCCTTT
CACCATTTCGACGACTCTCTCGCTGTACCTATGTTGCGTAGTGCGATAGAATCGGCCGATGCATTTATCATAATT
GAACTTGCTGCACGCGATTTCAGCTCAACGCTGATATTGCCGCTCTTATTCTTGATTCCATTCCAATACACCATG
CTTCGGTTTAGGCAGTCTCCATTACACCTGTTCTTTACATATCTTTTGCCCTTCTTCCCCCTACTGATGCTGTTT
GATGGTTGGGTGTCGATGATGCGCTGCCGGACACCTGACGAGCTGCACGATCTAGTCAGACGGTCGAATGCAGCT
GACATGAAGAACTGGGAGTTTCGCTCGGGAAAATCGGCTGTCATGTATCCAGTTGCATACGTGCATTGGTTTATG
GGAGTGAAGAAGACGGCTCAGTAA
Gene >Ani_SJS72_1|g5679.t1
ATGCCTATCCTCCCCCGCCTCCATCTCTTCGAAATCGCCGATCAGCCATGGTGTCCCGACAAGGCGATCGAATAT
GTTCAGCTATGCCTCACCCACTCCTGGAACCTCCGCATCCCTCTGCTCACAAAAACTTCTCCGGCTGCTGTTGCC
TGCGAGGTCATTACGCAGAATTTGCCTGATCTCTCGTCCTTCACCTTGGTTGATCTCTGTTCGGGCGCGGGAGGC
CCGACAACCACCTTTGAGAGTCTCCTCAATACCCAACTGCACGACCTTGGCCGCCCTCCAATCCAGTTTCTACTC
ACAGACCTAAACCCCCGCATTGGAGCATGGGCGGCCCTAAGCAAAGACCAAGATAACATAGCATATATCTCAGAA
TCAGTTGACGCAACTCAGTGTGGTCGACTGGCTCCACGCGACCGCAAGGAATGTCGGATGTTCAATCTATCCTTT
CACCATTTCGACGACTCTCTCGCTGTACCTATGTTGCGTAGTGCGATAGAATCGGCCGATGCATTTATGTAAGTT
GTATCCCCTAACATCTCTCAACCCACCCGTGAATAACAGACACTAATGACAGTAATTCTGCACTTTAGCATAATT
GAACTTGCTGCACGCGATTTCAGCTCAACGCTGATATTGCCGCTCTTATTCTTGATTCCATTCCAATACACCATG
CTTCGGTTTAGGCAGTCTCCATTACACCTGTTCTTTACATATCTTTTGCCCTTCTTCCCCCTACTGATGCTGTTT
GATGGTTGGGTGTCGATGATGCGCTGCCGGACACCTGACGAGCTGCACGATCTAGTCAGACGGTCGAATGCAGCT
GACATGAAGAACTGGGAGTTTCGCTCGGGAAAATCGGCTGTCATGTATCCAGTTGCATACGTGCATTGGTTTATG
GGAGTGAAGAAGACGGCTCAGTAA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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